BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	954,817	G→A	12.9%	V24V (GTC→GTT)	focA ←	formate transporter FocA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	954,817	0	G	A	12.9%	238.7 / 4.6	113	V24V (GTC→GTT)	focA	formate transporter FocA
Reads supporting (aligned to +/- strand): ref base G (72/21); new base A (2/12); total (76/37)
Fisher's exact test for biased strand distribution p-value = 8.24e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 114 total aligned reads displayed.

CCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGTAAATATTTGATTATCCAAATAAAAATAAATTTTA  >  NC_007779/954580‑955051

cccACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑CGAT‑AGAAAGGCTTAAGCGG‑GTGGTTCGTTGGTTTATAg                                                                                                                                                                                                                                              >  1:1629599/1‑238 (MQ=255)

     tCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTTTTGAAAcc                                                                                                                                                                                                                                         >  1:2212979/1‑238 (MQ=255)

                   acaaTCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCctc                                                                                                                                                                                                                                   >  1:1414367/1‑230 (MQ=255)

                   acaaTCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGGCTTAAGCGG‑AGGTTTTGGTGCTTTATAGAAACCCGCCCCTTCGGcc                                                                                                                                                                                                                            >  1:818228/1‑237 (MQ=255)

                           cacGGTGGAGGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGGTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCa                                                                                                                                                                                                                  >  1:896098/1‑239 (MQ=255)

                            acGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTTGTTGGTTTATAGACACCCGACTCTTCGGCCACCTTGGCCAt                                                                                                                                                                                                                 >  1:263964/1‑239 (MQ=255)

                               gTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCAGAAAGGCATTGTGCCT‑GTGCC‑A‑GGGGTTGCTGTGATATAGAAGACGAAAGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGGCTTAAGCGG‑ATGATTCGTTGCTTTATACACACCCGCCTCTTCGGTCACTTTGGACATTgc                                                                                                                                                                                                              >  1:811039/1‑239 (MQ=255)

                                tGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAA‑AGAAAATCTTTAGCGG‑ATGTTTTGTTGCTTTTTATACACCCGCCTCTTTCGCCACTTTGGGCAttttc                                                                                                                                                                                                             >  2:879057/1‑236 (MQ=255)

                                  gaaaaaaaGAGATCGGCCCCACAGACAACAAAAAGAACCCGCCCC‑AGAGAGAAGAAAACGCCACCACCCTTTTTCGCC‑A‑GGCGGAAGGGCTTTGTGCGT‑GTGCG‑A‑GGGGTGGGTGTAATAAAGAAGAGAAAGGCGAT‑GGAGAAAAAACCCCC‑GGCGTA‑AA‑CCGCA‑AGAT‑AAAAATTTTGAAGGGG‑TTGTTTCGTTGTTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTgcag                                                                                                                                                                                                            <  2:350451/233‑1 (MQ=255)

                                       aagaagaTCGGCCCCGAAGACAAAAC‑AAGAAACCGCCCCAAGGGAGAAGCAAAGGCCGCCACCAGGTTTTGCC‑G‑GGGAGAGGGGAGTTGTCCGT‑GTGCC‑T‑GGGGTTGGTTGAATAAAGAAGACAAATGAGAT‑TAAGAGGAAACCCCG‑GGCTGT‑AA‑TCGCA‑AAAA‑AGAAATTTTAAGGCGT‑TTTTTTCTTTGTTTAATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAgg                                                                                                                                                                                                        <  2:2143744/233‑1 (MQ=255)

                                         agagATCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGG‑AA‑TCGCC‑AGAT‑AGAAAGGCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGt                                                                                                                                                                                                    >  1:306064/1‑239 (MQ=255)

                                          gagaTCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACAACCGCCTCTTCGGCCACCTTGGCCATTGCAGCAGGAAGTa                                                                                                                                                                                                   >  1:516350/1‑239 (MQ=255)

                                            gaTCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTaaa                                                                                                                                                                                                 >  1:810950/1‑239 (MQ=255)

                                            acgcGGCCCCGCAAACAACAAAAAGACTGCGCCAG‑AGAGAAAAACAAACGCCGCCAACCAGTTTTGCC‑A‑TGCAGAAGGGCTTTGTGTCT‑GGGCC‑A‑GGGGTTGGTGTGATAAAAAAGAAGAATGCGAT‑GGA‑AAGAAAACCCCGGGCGTT‑AA‑CCGCC‑AGAT‑AAAAATTCTTAAGTTG‑ATGTTTCTTTGTTTTATATACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTaa                                                                                                                                                                                                  <  2:1321571/235‑1 (MQ=255)

                                             atggcccccacAGAAAACAAAAAAACGCCGCCCA‑GGAGAGAAGCAAAGCCCGCAAACCAGTTTTCCC‑A‑GGCGGAGGGACTTGGTGCTT‑GTGCG‑G‑GGGGTGGCTGAAATAAAAAGGACAAATGCGTT‑GGATATAAAACCCCG‑GGCGGT‑AA‑CCGCC‑AGAT‑AGAAATTTTAAAGCGG‑TTGTTTGGTTGTTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTaaaa                                                                                                                                                                                                <  2:818228/229‑1 (MQ=255)

                                             aTCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGGAAATCTTAAGCGG‑GTGTTTCGTTGCTTTATAGACACCCCCCTCTTCGGCCACTTTGGCCATTTTCGCAGGGAGTaaaa                                                                                                                                                                                                >  2:67597/1‑239 (MQ=255)

                                             aTCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAATCTTAAACGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTTCAGCCGGGAGGaaaa                                                                                                                                                                                                >  2:1941813/1‑239 (MQ=255)

                                             aTCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TAAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAA‑AGAAAGGCTTAAACGG‑AAGTTTCGGTGCTTTATAGAAACCCGCCTCTTTGGCCACTTTGGCCATTTGAGCAGGAAGTaaaa                                                                                                                                                                                                >  1:1483676/1‑239 (MQ=255)

                                                  cTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑CGAT‑AGAAAGTCTTAAGCGG‑ATGGTTCGTTGCCTTATAGACACCCGCCTCTTCGGCCACTTTTGCCATTGCGGCAGGAAGTAAAAGATCa                                                                                                                                                                                           >  1:265139/1‑239 (MQ=255)

                                                    ccGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATACCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGCGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGCT‑TGAGATGACAACACC‑GGCGGT‑AA‑TCCCC‑AGAT‑AGAAATGATTAAGCGG‑ATGTTTCGCTGCTTTATAGACACCCCACACTTCGGCCACTCTTGCCATTGCTGCAGAAAAAAAAAGATCaaa                                                                                                                                                                                         >  2:1708303/1‑239 (MQ=255)

                                                         aaccaaaaaaaGAATCACCCGA‑GGAAAGAAGCAACTGCCGCCAACCAGTTTGGCC‑A‑GGCGGAGGGGCA‑TGTGGCTGGGGCG‑G‑GTGGTAGTTGTAAAAAAAAAGAAGAAGGTGAG‑TGAGAGAAAAACACG‑GGCGGT‑AC‑ACGCA‑AAAT‑AAAAATTAGTAATGGT‑ATGTTTCTTTGTTTAAAAAACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGt                                                                                                                                                                                    <  2:1112658/231‑1 (MQ=255)

                                                             acacAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCTCC‑AGAT‑AGAAAGACTTAAGCGG‑CTGTTTCGTTGCTTTATAGAAACCCCCCTCTTCGGCCACTTTGGCCATTGTTGCAGGAAGTAAAAAATCACAAGGGTTGT‑c                                                                                                                                                                               >  2:1765772/1‑239 (MQ=255)

                                                               acaAAGAATCAGCCCC‑AGTGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGAGCCT‑GCGCC‑A‑GTGGCTGCTGTAATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TAGTC‑AGAT‑AGGAATGCTTAAGCGG‑ATGTTTAGGTCATCTATTGAAACCCGCCTCCTCTGCCACTTTTGCCTTTGCAGCAGGAAGTAAAAGATCAAAAGGGTTgcaa                                                                                                                                                                               >  1:2060034/1‑235 (MQ=255)

                                                                      aTCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGACTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTtac                                                                                                                                                                      >  1:985197/1‑239 (MQ=255)

                                                                        cAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGGTGT‑CAGCTTTcaa                                                                                                                                                                      >  1:872039/1‑236 (MQ=255)

                                                                         aGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGGAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACt                                                                                                                                                                   >  1:895126/1‑239 (MQ=255)

                                                                           ccca‑AGAGAGAAGCAAATGCCGCCAACCATTTTTGCC‑A‑TGCGGAAGGGAATTGTGCCT‑GGGCC‑A‑GTGGTTGCTGTAATATAGAAGACGAATGGGAT‑TGAGATAAAAACCCC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTAAAGCGG‑ATGTTTCGTTGTTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTaaaa                                                                                                                                                                                                <  1:1127133/209‑1 (MQ=255)

                                                                                agagagAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGGGG‑ATGATTCGTTGGTTTATAAAAACCCGCCTCTTCGGCCACTTTTGCCATTGCAGCAGGAAGTAAAAAATAAAAAAGGTTGT‑CAGCTTTCACACCCActc                                                                                                                                                              >  1:573484/1‑238 (MQ=255)

                                                                                agagagAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑AAGGTTCGTTGCTTTATAGACACCCGCCTCTGCGGCCACTTTGGCCATTGCAGTAAGAAGTAAAAAAACAAAAGGGTTGT‑CAGGTTTCACACCAAccg                                                                                                                                                              >  2:1459716/1‑236 (MQ=255)

                                                                                   gagcgaaaaaTGCC‑CCCACCAGTTTTGCC‑AGTGCCGAGGGGCTTGGTGCGT‑GTGCC‑G‑GGGTTTGTTGTAATAAAGAAGACAAATGCGAT‑TGAGATAAAACCCCC‑GGCGTT‑AA‑CCGCC‑AGAT‑AGAATGTCTTAAGCGT‑TTTTTTTTTTTTTTTAAAAACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAActctct                                                                                                                                                           <  2:573484/231‑1 (MQ=255)

                                                                                   gaaaaaaaaaCGCCCCCAACCATTTTTGCC‑A‑GGCGGAGGGGCTTTGTGCCT‑GAGCC‑A‑GTGGTTGGTGAAATAAAAAAAACAAATGCGAT‑TGAGA‑AAAAACCCC‑GGGGGTAAA‑CCGCA‑AGA‑‑AAAAAATTTTAAGGGGTATTTTTTGTTGTTTTAAAAACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAActctc                                                                                                                                                            <  2:417988/230‑1 (MQ=255)

                                                                                      aaGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGAGG‑AGGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCttt                                                                                                                                                       >  1:1459313/1‑239 (MQ=255)

                                                                                      aaGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGG‑AA‑TCGCC‑AGAT‑AGATAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCCGGAAGTAAAAGATCAAAAGGGTTGC‑TAGCTTTCACACTAACTCTCTCttt                                                                                                                                                       >  1:951485/1‑239 (MQ=255)

                                                                                      aaGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATG‑AAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGGTGT‑CAGCTTTCACACTAACTCTCTCTtta                                                                                                                                                      >  1:847630/1‑239 (MQ=255)

                                                                                           aaTGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑ACGCC‑AGAT‑AGAAAAGCTTAAGCGG‑ATGTTTTGTTGCTTTATAGACAACCGCCACTTCGGCCACTTTGGCCATTGCCGCAGGAAGTAAAAAATCAAAAGGGTTGT‑CAGATTTCAAACTAACTCTCTCTTTATTaa                                                                                                                                                  >  1:1675979/1‑239 (MQ=255)

                                                                                            acccccccAACCGGTTTGGCC‑A‑TGGGGAGGGGGTTTGTGCCT‑GTGCG‑A‑GTGGTTGTGGTAATATAGAAAACGAATGCGAT‑TGAAAT‑AAAACCCC‑GGGGGG‑AA‑TCCCC‑CGGTAAGAAAGTCTGAAGGGT‑ATGTTTCTTTGTTATATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAg                                                                                                                                                 <  2:263964/233‑1 (MQ=255)

                                                                                               ccgaaaacgttttttGCA‑A‑GGCGAAAGGGTTTTGTGCGT‑GGGCC‑G‑GGGGTTGCTGTAATATAGAAGACAAATGCGTT‑TGAGAT‑AAAACCCC‑GGGGGTAAA‑TCCCA‑AGAG‑AGAAAGTTTAAAGGGG‑TTTTTTTGTTGTTTTAAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCg                                                                                                                                              <  2:1476213/228‑1 (MQ=255)

                                                                                                 gccAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCTT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAAGGGTTT‑CAGGTTTCACACTAACTCTTTCTTTATTAAGTAGGc                                                                                                                                            >  2:694235/1‑239 (MQ=255)

                                                                                                   cacccggTTTGGCC‑A‑GGCCGAAGGGTATTGGGCTT‑GGGCA‑A‑GTGTGTGCTGTAATAAAAAAGACAAAGGCGTT‑TGAGAT‑AAACCACC‑GGCGGT‑AA‑CCGCA‑AGAT‑AGAAAGTTTTAAGGGG‑TTTTTTCGTTTTTTTAAAAACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGcga‑c                                                                                                                                        <  2:847630/233‑1 (MQ=255)

                                                                                                    aaccttttttGCC‑G‑TGCAGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTAATATAGAAAACGAATGCGAT‑TGAGATGAAAACCCC‑GGCGTT‑AA‑TCGCA‑AGAA‑AGAAAGTCTTAAGCGG‑ATTTTTCGTTGTTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGcga‑c                                                                                                                                        <  1:1488756/233‑1 (MQ=255)

                                                                                                         tttttGCC‑A‑GGCGGAGGGGTTTTGTGCGT‑GTGCC‑G‑GTGGTGGTTGTGATAAAGAAGAGAAATGCGAT‑GGAGATAAAACCCCC‑GGCGGA‑AA‑TCGCA‑AGAT‑AGAAAGTTTAAGGGGG‑TTTTTTCGTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGAt                                                                                                                                   <  2:895126/238‑1 (MQ=255)

                                                                                                          ttttGCCAA‑GGCCGAGGGGTATTGT‑CCT‑TGGCC‑ATGGGTTTGGTGTAATATAAAAAACGAATGCGAT‑TGAAATAAAAACCCC‑GGCGGT‑AC‑TCGCA‑AGAG‑AAAAATTCTAAAGCGT‑ATTTTTTTTTTTTTTATACACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGAt                                                                                                                                   <  2:306064/239‑1 (MQ=255)

                                                                                                            ttGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACt                                                                                                                                >  1:1338239/1‑239 (MQ=255)

                                                                                                               cc‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGAACAAAAAGGTTGT‑CAGCTTTCACACTTACTCTCTCTTTATTAAATCGGCGA‑AGAGATACTAAc                                                                                                                             >  1:1110881/1‑239 (MQ=255)

                                                                                                                c‑A‑TGCGGAGGGACTTTGGGCCT‑GTGCC‑G‑GTGGTTGCTGTAATATAAAAGAAAAAGGGGAT‑TGAGA‑AAAAACCCC‑CGGGGT‑AA‑ACCCCAAAAA‑AAAAAGTTTAAAGCGG‑TTTTTTCTTTGTTTAAAAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACa                                                                                                                            <  2:881277/239‑1 (MQ=255)

                                                                                                                c‑A‑TGCAGAAGGGTATTGTGCCT‑GTGCA‑G‑GTGGTTGGTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACCCC‑GGCGGT‑AA‑TCGCC‑AGAG‑AGAAAGTCTTAAGCGG‑TTTTTTCGTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACa                                                                                                                            <  1:1235224/239‑1 (MQ=255)

                                                                                                                  cgtGCGGAGGGGCATTGTGCGT‑GGGCC‑A‑GGGGTTGTTGGAATATAGAAGACGGATGCGTT‑TGAGAGGAAACCCCG‑GGCGAT‑AA‑CCGCC‑AGAA‑AGAAAGTCTTAAGCGG‑TTGTTTCGTTGTTTAAAAACCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACa                                                                                                                            <  2:222894/237‑1 (MQ=255)

                                                                                                                  ccggCCAAAGGGCGTTGGGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAAAAGA‑GAAAGGGATGTGAAATAAAAACACC‑GGCGTT‑AA‑TCGCC‑AGAT‑AGAAAGTTTTAAGGGG‑TTGTTTCTTTTCTTTATAACCCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACa                                                                                                                            <  2:1155059/236‑1 (MQ=255)

                                                                                                                  acgacgaaaGGGCTTTGTGGC‑‑GTGCCGA‑GTGTTTGGTGTAATAAAGAAGCCAAATGCGTT‑GGGGGAAAAACCCCC‑GGCGGT‑AC‑CCCCA‑CGAT‑AAAAAGTTTTAGGCGG‑TTGTTTTTTTGCTTTAAAAACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACa                                                                                                                            <  2:1618356/232‑1 (MQ=255)

                                                                                                                  a‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGCAGACGAAAGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AAAA‑CGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCCCCTCTTCGGCCACTTTTGc                                                                                                                                                                                                                    >  1:927525/1‑152 (MQ=255)

                                                                                                                      gggAAGGGCTTTGTGCTT‑GTGCC‑G‑GGGGTTACTGTAATATAAAAGAGGATTGCGAT‑GGA‑AAGAAAACCCC‑GGGGGTAAA‑GCGCC‑AAAT‑GAAAAGTTTAAGGGGG‑TTTTTTGGTTGTTTTAAAAACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAg                                                                                                                         <  2:1338239/236‑1 (MQ=255)

                                                                                                                      ccGAGGGGCTTTGCGCTT‑GGGCG‑A‑GTGGTGGCTGTGATAAAAAAGAGAAAGGCGAT‑GGAGA‑AAAAACCCC‑GGGGGG‑AACTCGCG‑AAAT‑AAAAATTTTTAGGGGT‑TTTTTTTTTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACaa                                                                                                                           <  2:872039/236‑1 (MQ=255)

                                                                                                                      ccGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑CGAT‑AGAAAATCTTTAGCGG‑ATGTTTTGTTGCTTTTTAGACAACCCCCTCTTCGTCCACTTTGGCCATTGCAGCAGGATGTAAAAAATCCAAAGGGGTTT‑CAACTTTCACCCTAACTCTCTCTTTATTAAATCGGTGATCGA‑ATACTCACAAAGc                                                                                                                        >  2:2144635/1‑239 (MQ=255)

                                                                                                                         aaGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCAtt                                                                                                                     >  1:32473/1‑239 (MQ=255)

                                                                                                                                ttGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGG‑AA‑TCGCC‑AGAT‑AGAAAGACTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAATTCGGCGA‑CGAGATACTAACAAAGCATTATAGATg                                                                                                              >  1:635199/1‑239 (MQ=255)

                                                                                                                                 tgtgcct‑gtgcc‑A‑GTGGTTGTTGTGATATAGAAGAAGAATGCGAT‑TAAGATGAAACCCCC‑GGCGTT‑AA‑TCGCC‑AGAA‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTTCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATga                                                                                                             <  1:879057/239‑1 (MQ=255)

                                                                                                                                     cct‑gtgcc‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑CGAT‑AGAAAGGCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTTCAGCAGGAAGTAAAAGATCAAAAAGGGTGT‑CAGCTTTCACACTAACTATCTCTTTATTAAATCGGCGA‑CGAGATACCAAAAAAAAATTATAATTGAGaaa                                                                                                         >  2:553034/1‑239 (MQ=255)

                                                                                                                                      ct‑gtgcc‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGGTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAAt                                                                                                        >  1:1555847/1‑239 (MQ=255)

                                                                                                                                      ct‑gtgca‑T‑GTGGTTGTGGGGAAAAAAAAGAAAAATGGGTT‑TGAGAAAAAAACCCG‑GGGGGT‑AA‑CCGCA‑AGAG‑AGAAAGTTTAAAGGGT‑TTGTTTCTTTGTTTTAAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGaaa                                                                                                         <  2:32473/238‑1 (MQ=255)

                                                                                                                                      ct‑gggcc‑A‑GTGGTGGCTGTAATATAGAAAAAGAAGGCGAT‑TGAGATAAAAACCCC‑GGCGGT‑AA‑CCGCC‑AGAT‑AAAAATTCTAAAGCGG‑TTGTTTCTTTGTTTTAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGaaa                                                                                                         <  1:67597/238‑1 (MQ=255)

                                                                                                                                         gtgcc‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGGCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGAATTATAGAt                                                                                                               >  1:2157378/1‑230 (MQ=255)

                                                                                                                                         gtgcc‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGACTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGACACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTg                                                                                                      >  1:794021/1‑239 (MQ=255)

                                                                                                                                         gtgcc‑A‑GTGGTTGCTGTCATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TTGCC‑AGAT‑CGAAAGGCTTAAGCGG‑ATGGTTCGTTGCTTTATAGACACCCGGCTCATCGGCAACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATAATGACAAAGCATTCTAGAAGAGAAAttt                                                                                                      >  1:2095583/1‑238 (MQ=255)

                                                                                                                                          tgcc‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑GTGTTTCGTTGCTTTATAGACACCCGCCCCTTCGGCCACTTTGGGCATTGCAGCCGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACCAACTCTCTCTTTATTAAAGCGGCGA‑CGAGATACCAACAAAGCATTATAGATGAGAAATTGa                                                                                                     >  2:1347233/1‑239 (MQ=255)

                                                                                                                                               a‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGAtata                                                                                                 >  1:1129454/1‑239 (MQ=255)

                                                                                                                                               a‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGGTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGAtata                                                                                                 >  1:206767/1‑239 (MQ=255)

                                                                                                                                                  tGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAAc                                                                                                                             >  1:2266612/1‑209 (MQ=255)

                                                                                                                                                        cTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACAACCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGGTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGAatatat                                                                                         >  1:885716/1‑239 (MQ=255)

                                                                                                                                                        agatgATATAGAGGACAAATGGTAT‑GAAGAAGAAAACCCG‑GTGGGT‑AA‑TCGCA‑AGAT‑AAAAATTCTAAAGCGT‑GTTTTTTTTTGTTTAAAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCatat                                                                                         <  2:179917/236‑1 (MQ=255)

                                                                                                                                                            gATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGGTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGAAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGG‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCata                                                                                          >  1:1721418/1‑234 (MQ=255)

                                                                                                                                                             atatAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAATCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCg                                                                                     >  1:812331/1‑238 (MQ=255)

                                                                                                                                                             ataaAGAAGACAAATGAGAT‑GGAAAAAAAAACCCG‑GGCGGT‑AA‑CCGCC‑AGAT‑AGAAATTCTAAAGAGG‑TTGTTTCTTTGTTTTAAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGc                                                                                    <  2:1129454/239‑1 (MQ=255)

                                                                                                                                                              tataGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑GTGTTTCGTTGCTTTATAGAAACCCGCCTCTTCGGCCACTTTGGCCATTGGAGCAGGAAGTAAAAGATCAAAAGGGGTGT‑CAGACTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAAATGATATAGATCATAtc                                                                                        >  1:332641/1‑234 (MQ=255)

                                                                                                                                                                   aagaCGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACCCTAACTCTCTCTTTATTAAGACGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGGAATTGAtataat                                                                                               >  1:1139956/1‑220 (MQ=255)

                                                                                                                                                                     gaCGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGCTACTAACAAAg                                                                                                                         >  1:425250/1‑194 (MQ=255)

                                                                                                                                                                     gaCGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTaa                                                                                                                              >  1:1401723/1‑189 (MQ=255)

                                                                                                                                                                     gaCGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATta                                                                                                                    >  1:235702/1‑199 (MQ=255)

                                                                                                                                                                     gaCGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGACATTGCAGCAGGAAGTAAAAGATCAAAAGGGGTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGACGGCGA‑AGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGACTGGCTta                                                                            >  1:2226411/1‑239 (MQ=255)

                                                                                                                                                                     gaCGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TAGCC‑AGAT‑AGAAAGGCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGGTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTta                                                                            >  1:323114/1‑239 (MQ=255)

                                                                                                                                                                       gaagttagtt‑tGGGATAAACACACC‑GCCGGA‑TA‑TCCCC‑AGAT‑AGAGATTCTAAAGGGG‑TTGTTTTTTTGTTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTta                                                                            <  1:2007083/228‑1 (MQ=255)

                                                                                                                                                                       cGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TTGCC‑AGAT‑AGAAAGTCTTAAGCGG‑GTGTTTCGTTTCTTTATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGGTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGATAAATTGAtata                                                                                                 >  1:1083931/1‑216 (MQ=255)

                                                                                                                                                                       cGAATGAGAT‑TGAGATGAAAACACC‑GGCGGA‑AA‑TCGCC‑AGAT‑AGAAAGGCTTAAGCGG‑ATGTTTCGGTGCTTTATAGAAAACCGCCCCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAAGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGAt                                                                                              >  1:892034/1‑219 (MQ=255)

                                                                                                                                                                        gAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAA‑AGAAAGACTTAAGCGG‑GAGTTTCGTTGCTTTATAGACACCCGCCGCTTCGGCCACTTTGGCCATTGTAGCAGGAAGGAAAAGATCAAAAGGGTTGTACAG‑TTTCACACTAACTCTCTCTTTATTaa                                                                                                                                                  >  2:172443/1‑167 (MQ=255)

                                                                                                                                                                          aTGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTTGTTGCTTTATAGACACCCGCCTCTTTGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAgg                                                                        >  1:2051245/1‑238 (MQ=255)

                                                                                                                                                                          aTGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTTTAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAg                                                                                                                         >  1:103155/1‑189 (MQ=255)

                                                                                                                                                                          aTGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGGTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGGTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCa                                                                                            >  1:1997517/1‑218 (MQ=255)

                                                                                                                                                                             cGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTaa                                                                                                                              >  1:2138949/1‑181 (MQ=255)

                                                                                                                                                                             cGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATtata                                                                                                                  >  1:1289270/1‑193 (MQ=255)

                                                                                                                                                                             cGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTACTAAGTCGGCGA‑CGAGATACTAACAAAg                                                                                                                         >  1:1188831/1‑186 (MQ=255)

                                                                                                                                                                                       tgaaacccgc‑ggcggT‑AA‑GCGCA‑AGAA‑AAAAAGCTTTAAGTGG‑TTTTTTTTTTTTTTTAAAAACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCa                                                           <  2:2111233/230‑1 (MQ=255)

                                                                                                                                                                                               ccgggcgtT‑AC‑TCGCC‑AGAT‑AGATAGTATTAAGGGG‑TTGTTTCTTTTCTTTATAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGtttt                                                    <  1:1347233/236‑1 (MQ=255)

                                                                                                                                                                                                c‑ggcggT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATga                                                                                                             >  1:653307/1‑180 (MQ=255)

                                                                                                                                                                                                   gcggT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACACGCCTCTTCGGCCACTTTGGCCATTGCAGCCGGAAGAAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATATGCCCGTAACTCGCATGGTTTTTAt                                                 >  1:2132854/1‑238 (MQ=255)

                                                                                                                                                                                                                  agtt‑AGAAGGTCTGAGGGGG‑ATTTTTCTTTGTTTAATAAACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGt                                    <  2:810950/236‑1 (MQ=255)

                                                                                                                                                                                                                   aataaGAAGGTCTAAGGCTG‑TTTTTTCGTTGTTTAAAAAAACCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGt                                    <  1:553034/235‑1 (MQ=255)

                                                                                                                                                                                                                      aggaagttCTTAGGGGG‑TTTTTTCTTGGCTTTATACACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGt                                    <  1:3488/229‑1 (MQ=255)

                                                                                                                                                                                                                                   gCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGTAAat                                >  1:1349283/1‑227 (MQ=255)

                                                                                                                                                                                                                                        aTGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTaa                                                                                                                              >  1:1744826/1‑129 (MQ=255)

                                                                                                                                                                                                                                               gTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGTAAATATTTGATTATCCaaataaaaata         >  1:151371/1‑239 (MQ=255)

                                                                                                                                                                                                                                                      tataGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGTAAATATTTGATTATCCAAATAAAAATAAATTTTa  >  2:1181870/1‑239 (MQ=255)

CCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCC‑AGAGAGAAGCAAATGCCGCCAACCAGTTTTGCC‑A‑TGCCGAAGGGCATTGTGCCT‑GTGCC‑A‑GTGGTTGCTGTGATATAGAAGACGAATGCGAT‑TGAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAT‑AGAAAGTCTTAAGCGG‑ATGTTTCGTTGCTTTATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGT‑CAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGA‑CGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGTAAATATTTGATTATCCAAATAAAAATAAATTTTA  >  NC_007779/954580‑955051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`