New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	4110945 =	148 (0.900)	11 (0.070)	10/404	NT	7.1%	coding (124/402 nt)	hslR	ribosome‑associated heat shock protein Hsp15
	?	NC_007779	4111021 =	147 (0.940)					coding (48/402 nt)	hslR	ribosome‑associated heat shock protein Hsp15

TATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/4111190‑4110945 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgggcagcCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACCAAATTGCGCGGCAGCATCGAGAATCGCTTCGCTGTCATCAATAAACAGCGTTCTTTCA  >  NC_007779/4111021‑4111250                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAA                                                                                                                                                                                                                                                >  2:410085/1‑238  ATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACG                                                                                                                                                                                                                                              <  1:1631648/239‑1    TCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGG                                                                                                                                                                                                                                            <  1:591176/239‑1      GTTCCTGCCTCGGCGTGACTAATCCTGATTCCGGGATTACCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAACAGACACCTGCTGTTAAGGTTCGACTGGATAAATGGCTATAGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTCAGGTGCATTACAACGGGCA                                                                                                                                                                                                                                          >  2:1576414/1‑239      GTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCA                                                                                                                                                                                                                                          >  1:1219799/1‑239      GTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCA                                                                                                                                                                                                                                          >  2:1671885/1‑239                CGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCCCATAGCC                                                                                                                                                                                                                                >  1:1725292/1‑239                                GATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGTTCCCTTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCCCATAGCCATTTATCCAGTCGAAC                                                                                                                                                                                                                <  2:253393/239‑1                                               GAGAAACAGTCCCAACGCAATCCGTCACTGAAGGACTACCGCCGCCGCATCCCCTCGCTAATGGGAAGGAGACGCCATGAAAGAGAAACCTGCTTTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTT                                                                                                                                                                                                 <  2:602273/239‑1                                               GAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTT                                                                                                                                                                                                 <  1:982568/239‑1                                                           CAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGC                                                                                                                                                                                     <  1:1579407/239‑1                                                                CCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCT                                                                                                                                                                                 >  2:880687/1‑238                                                                  tcccgtaccgaAATGACAACCGCCGCCGGATCCCCTCGCTAATGTGAAGGAAACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAACCCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCT                                                                                                                                                                              <  2:986227/228‑1                                                                        CACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACA                                                                                                                                                                         <  1:880687/238‑1                                                                                    ACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGAT                                                                                                                                                            <  1:627042/239‑1                                                                                                                 AGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGAT                                                                                                                               <  1:572024/239‑1                                                                                                                            TGAAAGGGAAACCTGCTGTGGAGGTTCGCCTGGATAAATGGCTATGGTCTGCCCGTTTTTATAAACCCCGCGCGCGGGCCGGTGAAATGATTGAAGGCGTTAAGGTGCATTACAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATAC                                                                                                                    <  1:147563/239‑1                                                                                                                                                                                                                                             AACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACCAAATTGCGCGGCAGCATCGAGAATCGCTTCGCTGTCATCAATAAACAGCGTTCTTTC   >  1:884841/1‑239                                                                                                                                                                                                                                             AACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACCAAATTGCGCGGCAGCATCGAGAATCGCTTCGCTGTCATCAATAAACAGCGTTCTTTC   >  1:1497933/1‑239                                                                                                                                                                                                                                             AACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACCAAATTGCGCGGCAGCATCGAGAATCGCTTCGCTGTCATCAATAAACAGCGTTCTTTC   >  1:1454505/1‑239                                                                                                                                                                                                                                             AACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACCAAATTGCGCGGCAGCATCGAGAATCGCGTCGCTGTCATCAATAAACAGCGTTCTTTC   >  2:1107720/1‑239                                                                                                                                                                                                                                              ACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACCAAATTGCGCGGCAGCATCGAGAATCGCTTCGCTGTCATCAATAAACAGCGTTCTTTCA  <  2:1118046/239‑1                                                                                                                                                                                                                                              ACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACCAAATTGCGCGGCAGCATCGAGAATCGCTTCGCTGTCATCAATAAACAGCGTTCTTTCA  <  2:681647/239‑1                                                                                                                                                                                                                                              ACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACCAAATTGCGCGGCAGCATCGAGAATCGCTTCGCTGTCATCAATAAACAGCGTTCTTTCA  <  1:1006015/239‑1                                                                                                                                                                                                                                                 GGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACCAAATTGCGCGGCAGCATCGAGAATCGCT                                >  2:14852/1‑206                                                                                                                                                                                                                                                 GGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACCAAATTGCGCGGCAGCATCGAGAATCGCT                                <  1:14852/206‑1                                                                                                                                                                                                                                                      CCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATA                                                              >  1:266020/1‑171                                                                                                                                                                                                                                                      CCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATA                                                              <  2:266020/171‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/4111190‑4110945 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgggcagcCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACCAAATTGCGCGGCAGCATCGAGAATCGCTTCGCTGTCATCAATAAACAGCGTTCTTTCA  >  NC_007779/4111021‑4111250

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.