Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	2,606,887	A→G	21.4%	M439V (ATG→GTG)	hyfF →	hydrogenase 4 subunit F

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	2,606,887	0	A	G	21.4%	143.8 / 10.8	96	M439V (ATG→GTG)	hyfF	hydrogenase 4 subunit F
Reads supporting (aligned to +/- strand):  ref base A (25/47);  new base G (17/5);  total (42/54)
Fisher's exact test for biased strand distribution p-value = 5.60e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTGCTCAAGTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGCACAACGTAGCACCTGGCATGATTTTTTGCCTTCAGGCACCGCA  >  NC_007779/2606656‑2607123                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                  cTGCTCAAGTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTgc                                                                                                                                                                                                                                            <  1:890819/239‑1 (MQ=255)  tGCTCAAGTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTgcg                                                                                                                                                                                                                                           <  1:258867/239‑1 (MQ=255)  tGCTCAAGTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTgcg                                                                                                                                                                                                                                           <  1:1672805/239‑1 (MQ=255)    cTCAAGTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGGCT‑GGTACGGGTGGGGGcgc‑g                                                                                                                                                                                                                                        >  2:408093/1‑239 (MQ=255)    cTCAAGTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGcgc‑g                                                                                                                                                                                                                                        >  1:1784919/1‑239 (MQ=255)       aaGTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATTCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACAGATGGCTGCGg‑gggg                                                                                                                                                                                                                                     >  1:1336715/1‑238 (MQ=255)       aaGTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGGCT‑GGGACGGGTGGGTGggg‑gggg                                                                                                                                                                                                                                     >  2:309702/1‑238 (MQ=255)       aaGTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGGACGGGTGGGTGCGC‑gggg                                                                                                                                                                                                                                     >  1:986393/1‑238 (MQ=255)         gTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCCTTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATTGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGGCT‑GGTGCGGGGGGGGGCGC‑GGgggt                                                                                                                                                                                                                                   >  2:267272/1‑239 (MQ=255)         gTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGCCTGGCACGTAATCACCTTCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCA‑GGGACGGGTGGTCGCCC‑gggggg                                                                                                                                                                                                                                   >  1:644260/1‑236 (MQ=255)         gTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATATTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGGTCGGGAGGCTGCGC‑gggggg                                                                                                                                                                                                                                   >  1:1341463/1‑236 (MQ=255)           aCGGCACGCGCGCTCTCAACGTCGTTTGTGGGACGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTa                                                                                                                                                                                                                                 <  1:478764/239‑1 (MQ=255)              gCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGCGGGGCCT‑GG‑ACGGATGGCTGCGC‑ggggggttatg                                                                                                                                                                                                                              >  1:1019202/1‑231 (MQ=255)              gCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGGTGGCTGCGC‑GGGGGTTAATg                                                                                                                                                                                                                              >  1:677995/1‑239 (MQ=255)                  gcgcgATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTgcg                                                                                                                                                                                                                                           <  1:1586840/223‑1 (MQ=255)                          tcAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTgcg                                                                                                                                                                                                                                           <  1:1840117/215‑1 (MQ=255)                                  gtcTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCC‑GGTACGGATGGGTCCGC‑GGGGGGTGTTGGGG‑GAAACGCCGCCGG‑CCGt                                                                                                                                                                                                        >  2:207492/1‑239 (MQ=255)                                   tcTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGGCT‑GGTGCGGGTGGGGGCGC‑GGGGGTTGCTGGGG‑GAACCGCCGCCGG‑GCgcg                                                                                                                                                                                                       >  2:297243/1‑237 (MQ=255)                                   tcTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCC‑GGTACGGATGGCTGCGC‑GGGGGTTAATGGCG‑GAACCGCCGCCGG‑CCGtt                                                                                                                                                                                                       >  1:1425351/1‑239 (MQ=255)                                    cTGTGGGATGCTCAAAATCATGCCATTTCCCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTCCC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGtt                                                                                                                                                                                                       <  1:935288/238‑1 (MQ=255)                                      gtgGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTTCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCC‑GGGACGGATGGCTGCCC‑GGGGGGTTAAGGCG‑AAAACGCCGCAGG‑CCGttta                                                                                                                                                                                                     >  1:197004/1‑236 (MQ=255)                                             gCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGGCT‑GGGACGGGTGGCTGCGC‑GGGGGTTTATGGCG‑AAACCCCCCCAGG‑GCGTTAAACgggggg                                                                                                                                                                                             >  1:1438966/1‑237 (MQ=255)                                             gCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGGTGGCTGCGC‑GGGGGTTAATGGCG‑AAAACGCCGCAGG‑GCGTTAAACgggggg                                                                                                                                                                                             >  1:90573/1‑237 (MQ=255)                                              cTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGGCTGGGTCGGGATGG‑TGCGC‑GGGGGGGTATGGCGCAAACGCCCCCCGG‑CGGTGAACCgggggg                                                                                                                                                                                             >  2:1602318/1‑237 (MQ=255)                                                 aaaaTCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGGCC‑GGGACGGGTTGGTGGGC‑GGGGGTTTATGGCG‑AAAACGCCCCCGG‑CCGGTTACCgggggggtc                                                                                                                                                                                          >  1:457370/1‑233 (MQ=255)                                                        tGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGGCT‑GGGTCGGGTGGGGGCGC‑GGGGGTTTATGGGG‑GAACCGCCCCCCG‑GCGGTTACCGGGGGGGTCTCGGCggg                                                                                                                                                                                  >  2:1530206/1‑239 (MQ=255)                                                        tGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGGGTTTATGGCG‑AAACCGCCGCAGG‑CCGGTAACCGGGGGGATCTCGGCCgg                                                                                                                                                                                  >  1:1407037/1‑239 (MQ=255)                                                             tttACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGGACGGGTTGCTGCGC‑GGGGGTTTATGGGG‑AAAACGCCCCCGGCCCGTTAACCGGGG‑GGTCTCGggtgggtgg                                                                                                                                                                              >  1:321374/1‑237 (MQ=255)                                                             ttccccgccgTGCTGTTGGGCGGCGGGGCGGTGGTGCTGGCGGGGTTCCCGCCTTCCAACTTTTTTCTTGGCGA‑TGTTATGACAATTCCC‑GCG‑GGATTGGCGCGTAACCACCTGCTGATTATCGTCCTGGTTTTTTGGTTGTTACCGGTGGTGCTGGC‑GGGCCG‑GGTAGGGATGGCTGCGG‑GGGTGTTAAGGGCG‑AAGCCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGac                                                                                                                                                                             <  2:372514/235‑1 (MQ=255)                                                               tACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGGTGGCTGCGC‑GGGGGGTTATGGGG‑AAACCGCCGCAGG‑CCCGTTACCGGGGGGAGCTCgggcgggttaac                                                                                                                                                                            >  1:1678400/1‑228 (MQ=255)                                                                       tGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGGGTTAATGGCG‑AAACCGCCGCCGG‑CCGTTAACCGGGGGGATCTCGGCTGGGTGACCCCCTCGccc                                                                                                                                                                   >  1:1687220/1‑238 (MQ=255)                                                                            tttGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTAAACATTTTTCTTAGCGA‑ATTTATGCCCATTACC‑GCC‑GGACTGGCACGTAATCCCCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCaa                                                                                                                                                                  <  1:757552/235‑1 (MQ=255)                                                                            ttgggggggggTGCGCGGGCGCGGGCAGGGATGCCGCCCTTAAACATTTTTCTTAGCGA‑ATTTATGACCATTCCC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCGGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCaa                                                                                                                                                                  <  1:794529/226‑1 (MQ=255)                                                                                 ggggggTGCGCTGGCGCTGGCGGGGATGCCGCCCTTAAACATTTTTCTTAGCGA‑TTTTATGACCATTCCC‑GCC‑GGACTGGCACGTAATCCCCTGCTGATTATCGTCTTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGTTGGCTGCGC‑GGGTGTTAAGGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGAtt                                                                                                                                                          <  1:1498763/234‑1 (MQ=255)                                                                                            tggcgcgggcAGGGATGCCGCCCTTCAACATTTTTCTTAGCAA‑ATTTATGCCCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCatg                                                                                                                                              <  1:1530206/239‑1 (MQ=255)                                                                                                gcgggcGGGGATCCCGCCCTTCAACATTTTTCTTGGCGA‑TTTTATGCCCATTCCC‑GCC‑GGACTGGCACGTAATCCCCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCatga‑tg                                                                                                                                          <  1:555364/235‑1 (MQ=255)                                                                                                       gggtcgcccccCTTAAACTTTTTTTTTAGC‑A‑ATTTTAGACCCTTTCCGGCC‑GGACGGGCACGTATTCCCCTGTTGTTTTGCGTCCTGTTTTTATGGCTTTTACCGGGGGTGCGGGC‑GGCCCT‑GGTACGGGTGGCGGCGG‑GGGTGTTAAGGGCG‑AACCCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGa                                                                                                                                   <  2:321374/233‑1 (MQ=255)                                                                                                           tGCCGCCTTCAAACTTTTTTTTTGGCGA‑TTTTATGCCCTTCCCC‑GCC‑GGGCTGGCACGTAATCCCCTGCTGATTATCGCCCTGTTGTTTTTGTTTTTACCGCGGGTGCGGGG‑GGGCCT‑GGTACGGATGGCTGCGG‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATggg                                                                                                                               <  2:90573/238‑1 (MQ=255)                                                                                                            cccccccTTGCACATTTTTTGTAGCGATATTTATGCCATTTCCC‑GCG‑GGACTGGCACGTAACCCCCTGCTGTTTCGCGCCCTGCTGTTATCGGTTGTAGCGGGGGTGTGGGG‑GGGCCG‑GGGCGGGAGGGCTGGGG‑GGGTTTAAAGGGGG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCGATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATggg                                                                                                                               <  2:296094/234‑1 (MQ=255)                                                                                                              cgccCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGGTGGGTGCGC‑GGGGGTTTATGGGG‑GAAACGCCGCAGG‑CCGGTTACCGGGGGGAGTTCGGGTGGGTGAGCACCCCGCCACTGGGGGTTCTGCTGGGCATGA‑GGCGGGCGACGGGAAc                                                                                                                            >  2:1138098/1‑238 (MQ=255)                                                                                                              cgccCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGGGATCTCGGCTGGTTGACCACCTCGCCAATGGGGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAAc                                                                                                                            >  1:1267473/1‑238 (MQ=255)                                                                                                                cccTTCAACTTTTTTCTTAGCGA‑TTTTATGCCCATTCCC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCa                                                                                                                         <  1:556707/239‑1 (MQ=255)                                                                                                                cccTTCAACATTTTTCTTAGCGA‑TTTTATGACCATTCCC‑GCC‑GGACTGGCACGTAATCACCTGCTTATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCG‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCa                                                                                                                         <  1:386844/239‑1 (MQ=255)                                                                                                                cccTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGG‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAAGGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCa                                                                                                                         <  1:1465681/239‑1 (MQ=255)                                                                                                                  cctaaataTTTTTTTTAGCCA‑ATTTTAGACCCTTGCC‑CCCGGGAGTGCCACTTAACCCCCGGCTGTTTATCGTCGTGTTTTTTTTGCTGTTACCGGGGGTGGGGGG‑GGGCCT‑GGTGGGGAGGGGGGCGG‑GGGTGTTAAGGGCG‑AACCCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCat                                                                                                                        <  2:1267473/232‑1 (MQ=255)                                                                                                                           ttttCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGGTGGCTGCGC‑GGGGGTTAATGGCG‑CAACCGCCGCCGG‑CCGGTTACCGGGGGGGTTTCGGCTGGGGGTCCACCCCGCCCATGGGGGTTCTGGTGGTGATTAGTGC‑GGCGGTGGGGACGcccatttcccac                                                                                                               >  2:1444491/1‑227 (MQ=255)                                                                                                                             ttCTTGGCAA‑TTTTATGCCCTTTCCC‑GCC‑GGACTGGCACGTAATCCCCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTCCGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCt                                                                                                           <  1:1032970/239‑1 (MQ=255)                                                                                                                             ttCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGGGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGGGATCTCGGCTGGGTGACCACCCCGCCAATGGGGATTCTGCTGGGCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACaa                                                                                                              >  1:1580870/1‑236 (MQ=255)                                                                                                                              tCTTGGCGA‑TTTTATGCCCATTACC‑GCC‑GGGCTGGCACGTAATCACCTGCTGTTTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTg                                                                                                          <  1:692473/239‑1 (MQ=255)                                                                                                                                tttagagtctttATGCCCTTTCCC‑GCC‑GGACTGGACGGTATTCCCCTGCTGATTATGTTCCTGTTGTTTTTGCGTTTACCGCGGGTGTGGGG‑GGGCGT‑GGTGCGGATGGCGGCGG‑GGGTGTTAAGGGCA‑AACCCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGt                                                                                                         <  2:434507/230‑1 (MQ=255)                                                                                                                                  ggCGA‑ATTTATGCCCTTTCCC‑GCC‑GGACTGGCAGGTAGTCCCCTGCTGATTATCGTCCTGCTGTTATGGCTGTTAACGCTGGTGGTGGC‑GGGCCT‑GGTAGGGATGGCTGCGG‑GGGTGTTAAGGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGtcat                                                                                                      <  1:1132633/238‑1 (MQ=255)                                                                                                                                     gA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTACCGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGtcatca                                                                                                    <  1:257301/238‑1 (MQ=255)                                                                                                                                         tttATGACCATTCCC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCa                                                                                                                         <  1:1279944/215‑1 (MQ=255)                                                                                                                                              gACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGGGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCCCGCCAATGGGGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTTCACAACCTGTCATCAGGATCCTg                                                                                            >  1:848021/1‑238 (MQ=255)                                                                                                                                                  tttccc‑gcc‑gGACTGGCACGTAATCCCCTGCTGATTATCGTCCTGCTGTTATTGCTGTTACCGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTggcggg                                                                                       <  1:309702/235‑1 (MQ=255)                                                                                                                                                  gtgccc‑gcc‑gGATTGGAGCTTAATCACCGGCGGATTATCGTCCTGTTGTTGTTGCTGTTAGCGGGGGGGGTGGC‑GGGTCT‑GGTACGGATGGCTGTGC‑GGGTGTTAGTGGCG‑AACCCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTggcggg                                                                                       <  2:1442583/235‑1 (MQ=255)                                                                                                                                                  aTTCCC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATggg                                                                                                                               <  1:1449386/200‑1 (MQ=255)                                                                                                                                                   ttACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGGGTTAATGGCG‑AAACCGCCGCCGG‑GCGTTTACCGGGGGGGTTTCGGCTGGGTGACCACCCCGCCCATGGGGATTCTGCTGGTCCTGG‑TGCTGGCGTTGGGGACGCCGA‑TTCCACaa                                                                                                              >  2:1279944/1‑215 (MQ=255)                                                                                                                                                     ccc‑gcc‑gGACTGGCCCGTATTCACCTGCTGATTACCGTCCTGGTGTTATTGCTTTTACCGCTGGTGCTGGC‑GGGCGT‑GGTAGGGATGGCTGCGC‑GGGTGTTAATGGCA‑AACCCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGgcgc                                                                                    <  1:908593/238‑1 (MQ=255)                                                                                                                                                     ccc‑gcc‑gGACTGGCACGTAATCCCCTGCTGATTATCGTCCTGCTTTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAAGGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGgcgc                                                                                    <  1:1637965/238‑1 (MQ=255)                                                                                                                                                         gcc‑gGACTGGCACGTAATCCCCTGCTGATTATCGTCCTGCTTTTATTGCTGTTAACGCGGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTTTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTc                                                                                 <  1:924918/239‑1 (MQ=255)                                                                                                                                                         gcc‑gGACTGGCACGTAATCCCCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCTAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTc                                                                                 <  1:1031494/239‑1 (MQ=255)                                                                                                                                                             ggACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACaa                                                                                                              >  1:199208/1‑207 (MQ=255)                                                                                                                                                             ggACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGGGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGGGGTCTCGGCCGGTTGACCACCCCCCCCAAGGGGGTTCTTCTGGGCCTGG‑TGCTGGCGGTGGGGAAGCCTA‑TTCCACAACCCGTCATCATGATACTggcggggggctccc                                                                               >  2:1575533/1‑230 (MQ=255)                                                                                                                                                              gACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGGGTTAATGGCG‑AAACCGCCGCCGG‑CCGTTAACCGGGGGGATCTCGGCTGGGTGACCACCCCCCCAAAGGGGGTTTTGCTGGGCCTGG‑TGCCGGCGGTGGGGACGCATA‑tt                                                                                                                    >  2:1449386/1‑200 (MQ=255)                                                                                                                                                                 tGGCCCGTAATCCCCTGCTGATTATCGTTCTGGTTTTTTTGGTGTTAACGCTGGTGCTGGG‑GGGCCT‑GGTACGGGTGGCTGGGG‑GGGTTTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACtata                                                                          <  1:408093/239‑1 (MQ=255)                                                                                                                                                                 tGGCACGTAACCCCCTGCTGATTATCGTCCTGTTTTTATTGTTGTTAACGCTGGGGCGGGC‑GGGCCT‑GGTACGGATGGCGGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACtata                                                                          <  1:1602318/239‑1 (MQ=255)                                                                                                                                                                   gCACGTAATCCCCTGCTGATTATCGTCCTGCTGTTATTGCTTTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGTTGTTAAGGGCG‑AAACCGCCGCAGG‑CCGTTTACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCaa                                                                                                                                                                  <  1:922706/151‑1 (MQ=255)                                                                                                                                                                     aCGTAATCCCCTGCTGATTATCGTCTTGCTGTTTTTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTc                                                                       <  1:1481287/238‑1 (MQ=255)                                                                                                                                                                      cGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGGACGGGTGGCTGCGC‑GGGGGTTAATTGCG‑AAACCGCCGCCGG‑GCGTTTAACGGGGGGGTCTCGGCTGGGTGACCACCCCGCCCCTGGGGGTTCTGCTGGTTATGG‑TGGCGGCGGTTGGGACGCCAA‑ATCCACAACCCGGCATCATGAACCCTGCGGGGGGTTcccccctatgcc                                                                      >  2:691376/1‑228 (MQ=255)                                                                                                                                                                           tCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGa                                                                                                                              <  1:1861010/178‑1 (MQ=255)                                                                                                                                                                            ccccTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAgg                                                               <  1:468803/237‑1 (MQ=255)                                                                                                                                                                             aCCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGGGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTTCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAggg                                                              >  1:508774/1‑239 (MQ=255)                                                                                                                                                                             aCCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGGACGGATGGCTGCGC‑GGGTGGTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGGGATCTCGGCTGGGTGACCACCTCGCCAATGGTGATTCTGCTGGGCATGA‑TGCTGGCGGTGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGGGCTTTCCCTATAGTCCCCTCAggg                                                              >  1:1226357/1‑239 (MQ=255)                                                                                                                                                                               ctgttgATTATGGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTAGGGATGGCGGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGC‑GGCGCTTCCACTATAGTCCTCTCAGGGACg                                                           <  1:459046/239‑1 (MQ=255)                                                                                                                                                                                 gctgATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGGGATCTCGGCTGGGTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGGACGCATA‑TTCCACAACCCGGCATCAGGATCCTGGCGGGGGCTTCCCCTATAGTCCTCCCCAGGACg                                                           >  1:563964/1‑238 (MQ=255)                                                                                                                                                                                 gctgATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCGGCGC‑GGGGGTTAATGGCG‑CAACCCCCCCCGG‑CCGTTAACCGGGGGGGTCTCGGCTGGGTGCGCACCCCCCCCATGGGGGTTCTCCCGGGCCAGA‑TGCCGGGGATTGGAACGCCGATTTCCCCACCCTG‑CCTCAGGATCCTTGGCGGCGGCTCCCCCATAGTCCACCCACGGAccc                                                          >  2:1544490/1‑237 (MQ=255)                                                                                                                                                                                   tgATTTTCGTCCGGCTTTTATTGCTGTTACCGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTTTTAAGGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCAc                                                        <  1:1444491/239‑1 (MQ=255)                                                                                                                                                                                           gctctgctgTTGTTGCGGTTACCGCTGGGGTGGGT‑GGGCCT‑GGTGCGGGTGGCGGGGG‑GTGTTTCAAGGGCG‑AAGCCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATctgc                                                 <  2:1840938/235‑1 (MQ=255)                                                                                                                                                                                             ccTGCTGTTATTGCTGTTAACGCGGGTGCTGGG‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCA‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATctgcctg                                              <  1:237822/239‑1 (MQ=255)                                                                                                                                                                                               tgttgTTATGGCTGTTAACGCGGGGGCTGGC‑GGGCGT‑GGTACGGAGGGCTGGGG‑GGGTGTAAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGca                                            <  1:691376/236‑1 (MQ=255)                                                                                                                                                                                               tgctgTTTTTGCTGTTACCGCTGGTGCTGCC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAAGGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGca                                            <  1:539870/239‑1 (MQ=255)                                                                                                                                                                                               tgctgTTTTTGCGGTTAACGCGGGTGCTGGG‑GGGCCT‑GGTCCGGATGGTTGCGC‑GGGTTTTAATGGCG‑AACCCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGca                                            <  1:495408/239‑1 (MQ=255)                                                                                                                                                                                               tgctgTTATGGCTGTTAACGCGGGGGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGG‑GGGTTTTAATGGCG‑AAACCGCCGTAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGca                                            <  1:551560/239‑1 (MQ=255)                                                                                                                                                                                               gtgtttgttggCTGTTAACGGGGGGGCGGGC‑GGGCGG‑GGCGGGGGTGGCTGCGG‑GGGTGTTAAGGGCG‑AACCCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGca                                            <  2:677995/229‑1 (MQ=255)                                                                                                                                                                                                 ctgTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGGGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGGGCTTCCACTATAGTCCTCTCAggg                                                              >  1:818999/1‑219 (MQ=255)                                                                                                                                                                                                  tgTTATTGCTGTTAACGCGGGGGCTGGC‑GGGCCT‑GGTGCGGATGGCTGGGC‑GGGTGTTAAGGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGca                                            <  1:806004/236‑1 (MQ=255)                                                                                                                                                                                                    ttATTGCTGTTAACGCTGGTGCGGGG‑GGGCCG‑GGTGCGGTTGGTTGCGG‑GGGTGTTAAGGGCG‑AACCCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAAc                                                                                                             <  1:1800143/169‑1 (MQ=255)                                                                                                                                                                                                           ttttAACGGGGGGGCGGGG‑GGCCCT‑GGTCGGGATGGCTGCGC‑GGTTTTTAAGGGCG‑AACCCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGCACAACGTAGCAc                                 <  1:297243/236‑1 (MQ=255)                                                                                                                                                                                                            gTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGGGATCTCGGCTGGTTGACCACCTCGCCAATGGGGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCCGGGACGCACGATCTGCCTGCACAACCTAGCa                                  >  1:16603/1‑236 (MQ=255)                                                                                                                                                                                                             ttAACGGTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGTTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTgg                                                                                           <  1:552762/178‑1 (MQ=255)                                                                                                                                                                                                             ttAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGGGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGGGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGGGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGCACAACGTAGCACCTg                              >  1:681951/1‑239 (MQ=255)                                                                                                                                                                                                                     ggTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGGGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCCCTATAGTCCTCTCAGGGACGCACGATCTGCCTGCCCAACCGAGCACCCGGCATGAtt                      >  1:1552906/1‑239 (MQ=255)                                                                                                                                                                                                                          tGGG‑GGGGCT‑GGGACGGGTGGC‑GCGCGGGGTTTTAAGGGGG‑AAACCGCCGCAGG‑GCGTTAACCGGGGTGATCTCGGCTGGTTGACCCCCTCGCCAATGGTGATTCTGCTGGGCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGCACAACGTAGCACCTGGCATGATTTTTTg                 <  1:1529927/239‑1 (MQ=255)                                                                                                                                                                                                                                        tACGGATGGCGGCGG‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGCACAACGTAGCACCTGGCATGATTTTTTGCCTTCAGGCAc      <  1:267272/238‑1 (MQ=255)                                                                                                                                                                                                                                            gATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAAACGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGCACAACGTAGCACCTGGCATGATTTTTTGCCTTCAGGCACCGCa  >  1:1263229/1‑238 (MQ=255)                                                                                                                                                                                                                                             aTGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGCACAACGAAGCACCTGGCATGATTTTTTGCCTTCAGGCACCGcc  >  1:245244/1‑236 (MQ=255)                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                  CTGCTCAAGTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGA‑ATTTATGACCATTACC‑GCC‑GGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGC‑GGGCCT‑GGTACGGATGGCTGCGC‑GGGTGTTAATGGCG‑AAACCGCCGCAGG‑CCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGA‑TGCTGGCGATGGGAACGCATA‑TTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGCACAACGTAGCACCTGGCATGATTTTTTGCCTTCAGGCACCGCA  >  NC_007779/2606656‑2607123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑