BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	2,877,551	A→G	25.8%	L293P (CTT→CCT)	cas1e ←	type I‑E CRISPR‑associated endonuclease Cas1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	2,877,551	0	A	G	25.8%	328.5 / 112.1	165	L293P (CTT→CCT)	cas1e	type I‑E CRISPR‑associated endonuclease Cas1
Reads supporting (aligned to +/- strand): ref base A (56/66); new base G (21/22); total (77/88)
Fisher's exact test for biased strand distribution p-value = 8.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 165 total aligned reads displayed.

TTCCGTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAA  >  NC_007779/2877315‑2877782

ttCCGTTTTGTTTGCCCAGGCCATCACTACATGCCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATGTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGc                                                                                                                                                                                                                                              <  2:332470/239‑1 (MQ=255)

    gTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGaa                                                                                                                                                                                                                                          <  2:251172/239‑1 (MQ=255)

    gTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGaa                                                                                                                                                                                                                                          <  1:366341/239‑1 (MQ=255)

    gTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGaa                                                                                                                                                                                                                                          <  2:1785558/239‑1 (MQ=255)

              cccATGCCATCCCTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAgg                                                                                                                                                                                                                                <  2:666787/239‑1 (MQ=255)

              cccATGCCATCACTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAgg                                                                                                                                                                                                                                <  1:1219717/239‑1 (MQ=255)

                  tGCCATCACTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCtgt                                                                                                                                                                                                                            >  1:712487/1‑239 (MQ=255)

                        cACTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCa                                                                                                                                                                                                                         >  1:1558246/1‑236 (MQ=255)

                             cATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAgg                                                                                                                                                                                                                 >  1:1092996/1‑239 (MQ=255)

                              aTTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGc                                                                                                                                                                                                                          >  2:1753386/1‑229 (MQ=255)

                              aTTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGc                                                                                                                                                                                                                          <  1:1753386/229‑1 (MQ=255)

                                     tcttcCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCcg                                                                                                                                                                                                         >  2:1186810/1‑239 (MQ=255)

                                     tcttcCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCcg                                                                                                                                                                                                         >  1:335737/1‑239 (MQ=255)

                                      cgtcCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATTCTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCcgg                                                                                                                                                                                                        <  1:1695445/237‑1 (MQ=255)

                                       ttcCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCcggc                                                                                                                                                                                                       >  1:1730344/1‑239 (MQ=255)

                                          cGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGt                                                                                                                                                                                                    <  2:158903/239‑1 (MQ=255)

                                            ccAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTg                                                                                                                                                                                                  >  2:1686634/1‑239 (MQ=255)

                                                          tGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCtg                                                                                                                                                                                                                             >  1:1741682/1‑198 (MQ=255)

                                                             tCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCa                                                                                                                                                                                <  2:651810/238‑1 (MQ=255)

                                                                cAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCa                                                                                                                                                                            <  1:1828674/239‑1 (MQ=255)

                                                                                       ggATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AAt                                                                                                                                                   <  1:1005953/239‑1 (MQ=255)

                                                                                            cATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGc                                                                                                                                              <  1:1427824/239‑1 (MQ=255)

                                                                                              tCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTa                                                                                                                                            <  1:760273/239‑1 (MQ=255)

                                                                                               cACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCGAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTaa                                                                                                                                           <  2:335737/239‑1 (MQ=255)

                                                                                               cACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCGAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTaa                                                                                                                                           <  2:294547/239‑1 (MQ=255)

                                                                                               cACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTaa                                                                                                                                           <  2:1092996/239‑1 (MQ=255)

                                                                                               cACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTaa                                                                                                                                           <  1:1855491/239‑1 (MQ=255)

                                                                                               cACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTaa                                                                                                                                           <  2:1730344/239‑1 (MQ=255)

                                                                                               cACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTaa                                                                                                                                           <  1:1186810/239‑1 (MQ=255)

                                                                                                 ccTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATg                                                                                                                                         <  1:5077/239‑1 (MQ=255)

                                                                                                     cATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCt                                                                                                                                             <  1:231691/231‑1 (MQ=255)

                                                                                                       tataCCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCCGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGtttt                                                                                                                                     >  1:560640/1‑237 (MQ=255)

                                                                                                         taCCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTtacta                                                                                                                                 <  2:579022/239‑1 (MQ=255)

                                                                                                          aCCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGaa                                                                                                                                                                                                                                          <  1:677530/137‑1 (MQ=255)

                                                                                                          aCCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCCGACGCGAGCGCGACCCCTACTAGAGG‑AAAA‑AAATTTGTTAATGGTTtacct                                                                                                                                 >  2:90180/1‑236 (MQ=255)

                                                                                                            cccTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGc                                                                                                                                                                                                                               <  2:685950/146‑1 (MQ=255)

                                                                                                            cccTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCAGCGGCAAGCACg                                                                                                                                                                          >  1:1817867/1‑197 (MQ=255)

                                                                                                            cccTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACg                                                                                                                                                                          <  2:1817867/197‑1 (MQ=255)

                                                                                                            cccTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTaa                                                                                                                                           <  1:1325145/226‑1 (MQ=255)

                                                                                                            cccTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGGTTTA‑TTTCT‑CCCGCGGCAAAGACGTCCTCTTAAAGAGG‑GGTC‑AAATTTGGTAATGTTTTtctact                                                                                                                               >  1:68422/1‑238 (MQ=255)

                                                                                                            cccTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTg                                                                                                                              <  2:1268132/239‑1 (MQ=255)

                                                                                                               tGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGaa                                                                                                                                                                                                                                          >  1:1776106/1‑132 (MQ=255)

                                                                                                               tGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGGTGTT‑TTTTTCCCACCGGC‑AGCGCGCCCCCCATAAACGG‑GAAA‑AAATTTGCTCATGTTTTACTAATTCG‑a                                                                                                                          >  2:1134434/1‑239 (MQ=255)

                                                                                                               tGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGCTGGA‑TTTCT‑CCACCCGCAAGACCCGCCTCCAAAAGCGG‑ACAC‑AATTTTGCTTATTTTTTACTATTTCG‑a                                                                                                                          >  2:455173/1‑239 (MQ=255)

                                                                                                               tGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGaa                                                                                                                                                                                                                                          >  1:486156/1‑132 (MQ=255)

                                                                                                               tGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGaa                                                                                                                                                                                                                                          <  2:486156/132‑1 (MQ=255)

                                                                                                               tGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTG‑TTTTT‑CCAGCGGGAAACCCGCGCCCTCTAACCGG‑GAAC‑AATTTTGGTTATGTTTtat                                                                                                                                   >  2:231691/1‑230 (MQ=255)

                                                                                                               tGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCCGCGGCAAGCACGTCCTCTATAAACGG‑AATA‑AATTTTGCTAATGTTTTTCTTATGCgg                                                                                                                           >  1:645595/1‑238 (MQ=255)

                                                                                                               tGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCAGCGGCAAGCACGTCCTCTTTAAACGG‑GAAC‑AAATTTGGTAATGTTTTACTACTGCgg                                                                                                                           >  1:1847977/1‑238 (MQ=255)

                                                                                                               tGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AAATTTGCTAATGTTTTTTTACcgcgc                                                                                                                           >  1:417291/1‑238 (MQ=255)

                                                                                                               tGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGt                                                                                                                                                                         <  2:118530/195‑1 (MQ=255)

                                                                                                               tGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGGA‑TTTTT‑CCACCGGGAAACCCGCCCCCTTTTAACGG‑GAAC‑AATTTGGTTTATCTTTTTCTTCcgcgc                                                                                                                           >  2:77658/1‑238 (MQ=255)

                                                                                                               tGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGGTGTA‑TTTTT‑CCACGCGCAAGCACATCCCCCATAAACGGAAAAC‑AATTTGG‑TTATGttttttttcctcca                                                                                                                           >  2:1467123/1‑229 (MQ=255)

                                                                                                                gCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCCGCCGCAAACACGCCCCCTATAAACCG‑AAAC‑AATTTTGGTAATGTTTTaatacttgcga                                                                                                                          >  1:171436/1‑234 (MQ=255)

                                                                                                                gCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGGTGTA‑TTTTT‑TCCGCGGCACCGACGCCCTCTTTAAAAGG‑GAGC‑AATTTTGCTAAAGTTTTACTTCcgcgga                                                                                                                          >  1:254960/1‑237 (MQ=255)

                                                                                                                gCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGCTGTT‑GTTCT‑TCACCGGCACGCACGTCCTCTATAAGAGG‑AAAC‑AATTTGGCTACTGTGTTACTCCTGCG‑aa                                                                                                                         >  2:22120/1‑239 (MQ=255)

                                                                                                                   cGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCATGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑aaaaa                                                                                                                      <  1:62992/239‑1 (MQ=255)

                                                                                                                              caacCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACAGTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCAc                                                                                                           <  1:477268/239‑1 (MQ=255)

                                                                                                                                     aTGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTTTT‑CCACCGGC‑AGCACGGCCCCTTTAAACGG‑GAAC‑AAATTGGCTTATTTTTTTCTTCTTCG‑CAAAATAATCCCGCAACCCaaaa                                                                                                    >  2:1241281/1‑238 (MQ=255)

                                                                                                                                            aTCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCCACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCAGCGGCCAGCACGTCCCCTATAAACGG‑AATC‑AATTTGGCTAATGGTTTACTACTGCG‑AAAAAAATCCCTGCACCCCAAAAGG‑Acct                                                                                             >  1:1056055/1‑236 (MQ=255)

                                                                                                                                             tCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTcc                                                                                           <  1:597348/239‑1 (MQ=255)

                                                                                                                                                 ccTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑TCCACGGGAAACACGCCCTCTAGAAAAGG‑AAGC‑AATTTTGTTATTGATTTTTCACTGCC‑AAAAAAAACCCTTCACCCACAACGG‑GATTcctcg                                                                                        >  2:321145/1‑235 (MQ=255)

                                                                                                                                                 ccTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTaa                                                                                                                                           <  2:880874/189‑1 (MQ=255)

                                                                                                                                                 ccTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAACGG‑AATC‑AATTTGGCTaa                                                                                                                                           >  1:880874/1‑189 (MQ=255)

                                                                                                                                                   tCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGGA‑TTTCT‑CCCGCGGCCAACACCTACTCTTTTAACGG‑AATC‑AAATTTGCGAATGTTTTTCTACTTCG‑AAAAATAATCCTGCACCCCAAACGG‑ACTTCCCGGTc                                                                                      >  2:606473/1‑238 (MQ=255)

                                                                                                                                                      tAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTT‑TTTTT‑CCAGCGGCCAACACGTCCCCCATAAACGG‑CATCAAATTTGGTAAATCTTTT‑CTAATGCG‑CAAAATAAACCCGCACCACCAACCG‑ACTTCCCGGTCCgg                                                                                   >  2:76552/1‑238 (MQ=255)

                                                                                                                                                           gcgGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCAc                                                                             <  1:507956/238‑1 (MQ=255)

                                                                                                                                                           gcgGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCAc                                                                             <  1:1451490/238‑1 (MQ=255)

                                                                                                                                                                    cATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTacg                                                                   <  1:1467123/239‑1 (MQ=255)

                                                                                                                                                                    cATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTacg                                                                   <  1:1416149/239‑1 (MQ=255)

                                                                                                                                                                         tCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCCGCGGCAAGACCGTCCTCTATAAACGG‑GAAC‑AATTTTGCTAATGTTTTTCTAATGGGAAAAAAAATCCCT‑CACACCCAACGGCACTTCCGGGTCCGC‑CCCACCCGGtttccacac                                                                >  2:1532319/1‑232 (MQ=255)

                                                                                                                                                                           aGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGCTGTT‑TTTTT‑CCCACGGCCCGCACGTCCTCTTTTAGCGG‑GGGC‑AATTTGGGTCATGTTTTTCTTATCCC‑CAAAAAATCCCTCCCCCCCCAAAGG‑ACTTCCCCGGCCGC‑GCCCCCCGGGGTacgaccccc                                                             >  2:523319/1‑234 (MQ=255)

                                                                                                                                                                           aGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTaa                                                                                                                                           <  2:590443/163‑1 (MQ=255)

                                                                                                                                                                               aCCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCAGCGGCAAGCACGTCCCCTATAAGCGG‑GAAC‑AATTTTGGTAATGTTTTTTTACTGGG‑AAAAAAATTCCTGCACCCCCAAACG‑ACCTCCCCGTCCGGCCCCACCAGGGTAacaagcgccatc                                                          >  2:1023163/1‑228 (MQ=255)

                                                                                                                                                                                  aCGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCaa                                                     <  1:1159679/239‑1 (MQ=255)

                                                                                                                                                                                    gACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCaaaa                                                   <  1:1686634/239‑1 (MQ=255)

                                                                                                                                                                                     aCCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCAGCGGGAACCACGTCCTCTATAAGCGG‑GATC‑AATTTTGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACCCCAAAAGG‑ACTTCCCCGTCCCG‑CTCACCAGGGTTACGACCCCCTAtctcccaag                                                  >  1:1022436/1‑234 (MQ=255)

                                                                                                                                                                                       cAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCt                                                <  1:1188128/239‑1 (MQ=255)

                                                                                                                                                                                       cAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCt                                                <  1:798811/239‑1 (MQ=255)

                                                                                                                                                                                       cAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCt                                                <  1:1804969/239‑1 (MQ=255)

                                                                                                                                                                                       cAACATACTCATGTCAGCGACGCCGATGGCCTGCATCTCCCAGTGAGACAGGAAGCGGAATGGCAACAGGCTGTGCATCGTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGACCACGATAAGCGG‑AATC‑AATGTGGCAAATGTTTGGCTACTGCG‑AAAAATAGCCCGGCGCGCCAAACGG‑ACTGCCCGGTCCGG‑CTCACCAGGGTGACGACGCGCTATCTCAAAAGCt                                                <  2:18614/239‑1 (MQ=255)

                                                                                                                                                                                         aCATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCttt                                              <  2:560640/239‑1 (MQ=255)

                                                                                                                                                                                              cTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑GATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCTTTCGGt                                          >  1:783497/1‑238 (MQ=255)

                                                                                                                                                                                                cATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCAGCGGCAAGCACGTCCTCTTTAAACGG‑GATC‑AATTTTGCTAATGTTTTTATACTGCG‑AAAAATATACCTGCACCCCCAACGG‑ACTTCCCCGTCCGG‑CTCACCAGGGGTACGACGCGCTATCTCCAAAGCTTTCGGTaca                                       >  1:1453129/1‑239 (MQ=255)

                                                                                                                                                                                                 aTTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCt                                                <  1:1615688/229‑1 (MQ=255)

                                                                                                                                                                                                   ttCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCCGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCTTTCGGTacaaca                                    >  1:533645/1‑239 (MQ=255)

                                                                                                                                                                                                         tACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCTTTCGGTACAACAgtgt                                <  1:330978/237‑1 (MQ=255)

                                                                                                                                                                                                           cTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCAGCGGCCAGCACCTCCTCTATAAACGG‑GATC‑AATTTGGCTAAAGTTTTACAACTGTG‑AAAAATATCCCTTCACGCCCAACAG‑GCATACCGGTCCGG‑CTTACCAGGGCTACGGCCCGCTATCTCAAAAGATTTCGGGACACCAGGGTCaaa                            >  1:27270/1‑239 (MQ=255)

                                                                                                                                                                                                           cTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCAGCGGCAAGCACGTCCTCTATAAACGG‑GATC‑AATTTGGCTAATGTTTTTCTACTGCG‑GAAAATATCCCTGCACGCCAAACGG‑ACTTCCCCGTCCGG‑CCCACCAGGGGTACGACGCGCTATCTCCAAAACTTTCGGTACAACAGAGTCaaa                            >  1:764488/1‑239 (MQ=255)

                                                                                                                                                                                                               gATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCATGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCTTTCGGTACAACAGTGTCAAATTTa                        <  1:977806/239‑1 (MQ=255)

                                                                                                                                                                                                                aTGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTTGc                                                                                                                                              >  1:832228/1‑123 (MQ=255)

                                                                                                                                                                                                                  ggCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCTTTCGGTACAACAGTGTCAAATTTAatg                     <  1:626592/239‑1 (MQ=255)

                                                                                                                                                                                                                     cTGCATCTCCCAGTGGAACAGGAGGCGGAATGGCCACAGGATGTGCATCTTCAGGTGGGGGCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCTTTCGGTACAACAGTGTCAAATTTAatgat                   <  2:1340814/238‑1 (MQ=255)

                                                                                                                                                                                                                     cTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCTTTCGGTACAACAGTGTCAAATTTAatgat                   <  1:1521455/238‑1 (MQ=255)

                                                                                                                                                                                                                        cATCTCCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGGA‑TTTCT‑CCAGCGGGAAGCACGGCCTCTCTAAAGGG‑GATC‑AATTTTGGTAATGTTTTTCTTCTTCG‑GAAAATATTCCTGCACGCCCAAAGG‑AATTCCCCGTCCCG‑CTCGCCAGCGGTAAGGCGCGCCTTCTCAAAAACTTTTGCGTCAAAAATGTCACATTTAATGATGttt               >  2:1285354/1‑237 (MQ=255)

                                                                                                                                                                                                                           ctcCCAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCa            <  1:343073/239‑1 (MQ=255)

                                                                                                                                                                                                                             cccAGTGAAACAGGAGGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTaa                                                                                                                                           <  1:950493/113‑1 (MQ=255)

                                                                                                                                                                                                                             cccAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGGT‑TTTTT‑CCACCGGCAAGCACGGCCTCTTTAAACGG‑AATC‑AATTTGGCTAATTTTTTTTTACCGCG‑AAAAAAATCCCCCCCCCCCAAACGG‑ACTTCCCGGTCCGG‑GCCACACGGGTTACGACCCCCCACCTCAAACACTTTTCGTACAAAACTGTCAAATTTAatgtgttctgtaaa          >  2:938445/1‑228 (MQ=255)

                                                                                                                                                                                                                                  tGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTGCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCttt                                              <  1:1317939/198‑1 (MQ=255)

                                                                                                                                                                                                                                     aaCAGGAGGCGGAATGGCAACAGGCTGAGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTTT‑CCAGCGGGAAGCACCTCCCCTATAAGCGG‑AATC‑CATTTTGTTACTGTTTTAATCCTTCG‑CAAAATATCCCTGCACGCCACACGG‑ACCTCCCGGGCCGG‑CCCACCAAGGGTACGACCCGCCCTCTCAAAAGACTTCGGTCACACCGCGGCAAAATTAAATATGTCTGCAAAATCCTaaa  >  2:99087/1‑239 (MQ=255)

TTCCGTATTCGTTGCCCATGCCATCACTACATTGCCTTCTTCCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTA‑TTTCT‑CCAGCGGCAAGCACGTCCTCTATAAGCGG‑AATC‑AATTTGGCTAATGTTTTACTACTGCG‑AAAAATATCCCTGCACGCCAAACGG‑ACTTCCCGGTCCGG‑CTCACCAGGGTTACGACGCGCTATCTCAAAAGCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAA  >  NC_007779/2877315‑2877782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`