Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,205,143 C→A 13.7% Q9K (CAG→AAG)  ttdA → L(+)‑tartrate dehydratase subunit alpha

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077793,205,1430CA13.7% 249.9 / 4.4 107Q9K (CAG→AAG) ttdAL(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base C (22/67);  new base A (13/3);  total (35/72)
Fisher's exact test for biased strand distribution p-value = 2.77e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 114 total aligned reads displayed.

TCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCC  >  NC_007779/3204906‑3205381
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                    
tCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACa                                                                                                                                                                                                                                                     <  1:1800672/239‑1 (MQ=255)
 cAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTC‑AGACAAATAAAAAAAAATGAGTTTGC‑ATGATGAGGGGAAGTAATAAAAAACaa                                                                                                                                                                                                                                                    >  1:712037/1‑238 (MQ=255)
  aacATCGGTAAATATGCGCAGTTGTGGTAAGCGCAGTGTATTTCGCAAAACATTGCCAATCCCTGCTCTGGCGCAAGATTCATTCTTATTTTTGCGTTGAGTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                                                   <  1:373142/237‑1 (MQ=255)
  aGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ACGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                                                   <  2:578726/239‑1 (MQ=255)
     aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                                                   <  1:371040/236‑1 (MQ=255)
     aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                                                   <  2:439432/236‑1 (MQ=255)
     aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                                                   <  1:404915/236‑1 (MQ=255)
     aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGc                                                                                                                                                                                                                                                  <  1:437983/237‑1 (MQ=255)
     aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCa                                                                                                                                                                                                                                                 <  1:1465765/238‑1 (MQ=255)
     aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCa                                                                                                                                                                                                                                                 <  2:27715/238‑1 (MQ=255)
          tAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑aa                                                                                                                                                                                                                                          <  1:951785/238‑1 (MQ=255)
           aaTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGc                                                                                                                                                                                                                                                  <  1:945910/231‑1 (MQ=255)
             ttATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACACATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TC‑AATAAg                                                                                                                                                                                                                                      <  2:1120121/239‑1 (MQ=255)
                           gATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTg                                                                                                                                                                                                                        <  1:8325/238‑1 (MQ=255)
                               aGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTC‑AAACAAAAAAAAAAAAATGAGTTGGC‑ATGGTGAGGGAAAGAAATAAAAAAAAAGCAG‑GG‑AAAAAAATGA‑CAGAGATTGTCGCt                                                                                                                                                                                                                   >  1:859721/1‑239 (MQ=255)
                                    aGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTC‑CGACAAAAAAAAAAAAAGGAGGTGCC‑ATGGTGAGCGAAAGTAATAAACAAAAAGCAG‑GG‑AATAAGTTGA‑CAAAGATTGTCGCT‑AAC‑tt                                                                                                                                                                                                            >  1:93664/1‑239 (MQ=255)
                                      tgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTC‑AGACAAAAAAAAAAAAAGGAGTTGCC‑TTGGTGTGCGAAAGAAAAAAACAAAAAGCAG‑AG‑AAAAAGATGA‑AAAAAAATGTAGCG‑AAC‑ttt                                                                                                                                                                                                           >  2:723253/1‑238 (MQ=255)
                                             cgaaaaaCATTGCCATTCCCTGCTCTGGCACAATTTTCATTCTTATTTTCGGTTTGATTCACGAACTTTTAATTAAATTTTCACGGTGGAAAAAAATAAAAAACCACATTTTTAGTGGTATTTTGGGGGGGTAATTTTTTCA‑AGAAAAATACAAAAACGGGAGTTGCA‑ATGATGAGCAAAAGAAATAAGCAACAGGGAG‑TA‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CAt                                                                                                                                                                                                  <  2:86867/236‑1 (MQ=255)
                                                aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGAATTTTTTC‑AGACAAAAAAAAAAACAGGAGTTGCC‑CTTATGAGGGAAAGTAAAAAAAAAAAAGCAA‑TG‑GAAAAAATGA‑CAGAGAATTTTGCTAAAT‑TTTACCCC‑CAtat                                                                                                                                                                                                >  1:86867/1‑237 (MQ=255)
                                                       tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTT‑AGACAAAAAAAAAAAATGGAGTTGTG‑ATGTGGAGGGGAAGTAAAAAAAAAAAAGCAA‑AG‑AAAAAAATGA‑AAGAAAATGTGGCC‑AAA‑TTTACccc‑cccgtgttttaa                                                                                                                                                                                         >  2:1486365/1‑227 (MQ=255)
                                                               ccTTCTCTGGCTAAATATTCATTCTTATTTTCGCGTTGATTCACGAACTTTTAATTACATATTCACGGTGGAAAAAAATAAAAAACCACATTTTTAGTGGTGGTGTGTGGGGGTAAATTTTTCA‑AGAAAAAAACAAAAACGGGAGTTGCC‑ATAATGGGCAAAAGTAATAAGCAACGGACAG‑TG‑AATAAGTGGA‑CAGGGATGGCCGCT‑ACT‑TTAACCGC‑CATGATTTCTACCCGAATGcc                                                                                                                                                                                <  2:712037/239‑1 (MQ=255)
                                                                    tctGGCGCAATATTCATTCTTATTTTCGCTTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCtgatg                                                                                                                                                                           <  1:274494/239‑1 (MQ=255)
                                                                    tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATAAAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCtgatg                                                                                                                                                                           <  1:1082014/239‑1 (MQ=255)
                                                                         cgcAATATTCATTCTTATTTTCGCGTTGATTCACGTACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTT‑AAACAAAAAAAAAAAAATTAGTTTCT‑ATGATGAGGGAAAATAAAAAACAACAAGAAG‑AG‑AATAAAATGA‑CAAAAAATTTTGCT‑AAA‑ATTTCACC‑CCAGATTTCTTCCCGAATAGCATATGACgtg                                                                                                                                                                      >  2:344584/1‑239 (MQ=255)
                                                                             atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGAATTTTTTC‑AGAAAAAAACAAAAAAAGGAGTTTTC‑ATGATTAGAGAAAGAAAAAAACAAAAGGGAA‑AGCAAAAAGTT‑A‑GAGAGATAGTAGCT‑AAA‑TTTACCGC‑CCAAATTTTTACCACAATGCCTACTGACGgggtgg                                                                                                                                                                  >  2:671703/1‑239 (MQ=255)
                                                                              tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGGGGCGGTGAATTTTTCA‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TA‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                                 <  1:570415/239‑1 (MQ=255)
                                                                              tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGGGGAAAAAAATAAAAAACCACATTTTTAGTGGTATTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGAAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                                 <  1:344584/239‑1 (MQ=255)
                                                                              aaagcattcTTATTTTCGCGTTATTTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAACCCACATTTTTAGTGTTAGTTTGGGGCGGTTAATTTTCCC‑AAACAAAAACAAAAAGTGGATTTGCC‑ATGATGGTCGAAAGTAATAAGAAACAGGCAG‑TA‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTCCCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                                 <  1:1289167/235‑1 (MQ=255)
                                                                                  cattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTC‑AGACAAAAAAAAAAAATTGAGTTGGC‑ATGATGAGCGGAAGAAATAAGCAACAGGCAG‑TG‑AATAAATTGA‑AAGAGAATGTCGCT‑AAC‑TTTACCCC‑CATGATTTTTTCCCCAATGCCTGATGACGTGGGGGGTaaa                                                                                                                                                             >  1:92396/1‑239 (MQ=255)
                                                                                       ttATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGGGGCAAAAAATATAAACCCACATTTTTAGTGTTATTTTGTGGCGGGAAATTTTCCC‑TGACAAATACAAAAACTTGAGTTGCC‑TTGTTGAGCAAAAGAAATAAGCACCAGGCAG‑TG‑AATAAGTTGA‑CATATATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaa                                                                                                                                                        <  1:272636/239‑1 (MQ=255)
                                                                                       ttATTTCCGCTTTGATTCCAGAACTTTTAATTATATATTCGGGGGGGAAAAAAATATAAAACCACATTTTGGGTGGGAGTTGGGGGCGGTGAATTTTTCA‑AAAAAAAAAAAAAACCGGGAGTTGCC‑ATGAGGAGAAAAAGAAAAAAGCACCGGGCAG‑TA‑AATAAGTGGA‑AAGAGTTTGTCGCT‑ATC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaa                                                                                                                                                        <  2:227317/239‑1 (MQ=255)
                                                                                        tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGAATTTTTT‑AAACAAAAACAAAAAATGGAGATTGC‑AGGGTGAGGGGAAAAAATAAACAAAAAGCAA‑TG‑AAGAAAATGA‑CAAAGAATGTTGAT‑AAA‑ATTACCAC‑CCAGAGTTGTACCCCAATAGCTCATGAAGCGGGGGAGAaaaaaaaa                                                                                                                                                       >  2:409656/1‑239 (MQ=255)
                                                                                        tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTC‑AGACAAAAAAAAAAAATGGAGGTGGC‑ATGATGAGGGAAAATAAAAAACAACAAGCAG‑AG‑AATAAGTTGA‑CAGAGATTGTTGCT‑CAA‑TTTACCGC‑CCTGATTTTTACCCGAACTGCTGCTGAAGTGGGGGATAAACTaaaa                                                                                                                                                       >  1:1212404/1‑239 (MQ=255)
                                                                                        tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTC‑AAACAAAAACAAAAAATGGAGTTGTC‑ATGATGAGGGAAAGTAATAAGAAACAAGCAG‑TG‑AATAAGTTGA‑CAGAGATTTTCGCC‑ACA‑TTTTCCGC‑CATGATTTCTACCCCAATACCTGATGACGTGGGGGTTAAAACaaaa                                                                                                                                                       >  2:968692/1‑239 (MQ=255)
                                                                                         aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGAATTTTTC‑AAACAAAAAAAAAAACTTGAGGTGGC‑ATGATTAGCGAAAAGAATAAACAACAAGCAG‑TG‑AATAAAATGA‑CAGAGAATGTTGCT‑AAA‑TTTTACGC‑CCTGATTTTTACCCCAATGACTTATGGCGTGGGGGAtaaaataaaaa                                                                                                                                                      >  1:1678100/1‑238 (MQ=255)
                                                                                           tttCGCGTTGATTCACGAACTGTTAATTACATATTAACGGTGGCAAAAAATATAAAACCACATTTTGAGTGGTAGTTTGTGGGGGTAAATTTTTCC‑AGACAAAAACAAAAACGGGAGTTGCC‑ATGATGAGAAAAAGAAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGTTTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAg                                                                                                                                                    <  2:789501/239‑1 (MQ=255)
                                                                                                     aTTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAACCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGAAAAATACAAAAACGGGAGTTGCC‑ATGATGAGCAAAAGTAATAAGCAACAGGCAG‑TA‑AAAAAGTTGA‑CAGAGATTGTCGCT‑ACC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                                 <  1:619926/216‑1 (MQ=255)
                                                                                                               tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTC‑CCAAAAAAAAAAAAAAAGGAGTTTGC‑ATGATGAGGGAAAGTAAAAAACAAAAAACAG‑AG‑AAAAAATTGG‑AAGAAAATGTCGCT‑AAA‑TTTAACGC‑CCAGGTTTTTACCCCAATGCCTGATGACGGGGTGGAGAAAATaaaa                                                                                                                                                       >  2:619926/1‑216 (MQ=255)
                                                                                                                         atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTC‑AGACAAATAAAAAAAATGGAGTTTCC‑ATGATGAGCGGAAGGAATAAACAACAAGCAG‑TG‑AATAAATTGA‑AAGAGATTGTCGCT‑AAC‑TTTACCGC‑CCTGATTTCTACCCCAATGCCTGATGACGTGGTGGGTAAACTAAAACAACTAAAGGAAGCCGAAAAGTCGTCGATgggg                                                                                                                      >  1:1197362/1‑239 (MQ=255)
                                                                                                                          ttgtCACGGTGACAAAAAATAAACACCCATATTTTTAGTGGTGTTTTGGGGGGTAGAATTTTTCC‑AGAAAAATAAAAAATCGGGGGTTGCC‑AAAAGGGGCAAGAGAAATAAGCAACGGGAGA‑GG‑AATATGGAAA‑AATGTTTTGCCGTT‑ATC‑TTATCCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                     <  2:499802/236‑1 (MQ=255)
                                                                                                                          tatTCACGGTGGCAAAAAAAATAAACCCACATTTTTGGTGGTAGTTGGGGGGGGTGAATTTTCCC‑AGAAAAATACAAATAGTGGGGTTGCC‑ATGATGAGCGAAAGGAATAAGAAACAGGCGG‑TG‑AATAAGTTGA‑CAGGGTTTTGCGTT‑AAT‑TTTCCCGC‑CATGATTTCTACCCGAATGTCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                     <  1:1800029/239‑1 (MQ=255)
                                                                                                                          tatTCACGGTGGAAAAAAATATAAACCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGAAAAAAACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGAAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                     <  1:1474637/239‑1 (MQ=255)
                                                                                                                          tatTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTTTTTTGTGGCGGTGAATTTTCCC‑AAACAAATACAAAAACGGGAGTGGCC‑ATGATGAGCGAAATTAATAAGCAACAGGCAG‑TA‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                     <  1:997687/239‑1 (MQ=255)
                                                                                                                           atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTC‑AGACAAAAAAAAAAAATGGAGTTTCC‑CTTATGAGCGAAAGGAATAAACAAAAAGCAGTTG‑AAAAAG‑TGA‑CAGAGATTGTTGCT‑TAA‑TTTTCCGC‑CATGGTTTTTTCCCGAATTCCCGATGACGGGGGGGGTAAACTAAAAAAACCAAAAGAAGGCGAAACGTCGTCGATggggga                                                                                                                    >  1:1321054/1‑237 (MQ=255)
                                                                                                                           atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTC‑AGACAAATAAAAAAAATGGAGTTGCC‑ATGATGAGCGGAAGTAAAAAGCAACAAGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCC‑AAC‑TTTACCCC‑CCTGCATTTTTCCCCAATGCCTGACGACGTGGTGGGTAAAATAAAAAAACTAAAGGATGCCGAAACGCCGTCCATggggga                                                                                                                    >  1:1265265/1‑237 (MQ=255)
                                                                                                                           atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTC‑AGACAAAAAAAAAAAATGGAGTTGGC‑ATGATGAGCGGAAGGAATAAACAAAAAGCAG‑TG‑AAAAAATTGA‑CAGAGATTGTTGCT‑AAA‑TTTTCCCC‑CATGATTTTTACCCCAATGCCTGGTGACGGGGGGGGTAAACTAAAAAAACTAAAAGATGCCGAAAAGTCGGCGCTGGGGaa                                                                                                                    >  1:1167004/1‑239 (MQ=255)
                                                                                                                           atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTC‑AGACAAAAAAAAAAAATGGAGTTGCC‑CTGATGAGCGGAAATAATAAACAAAAAGCAG‑TG‑AATAAATTGA‑AAGAGATTGTCGCT‑AAA‑TTTACCGC‑CCTGATTTTTACCCGAAAGCCTGATGACGGGGGGGGTAAAATAAAACAACTAAAGGATGCCGAAAAGACGTCGGTGGGGaa                                                                                                                    >  1:1795805/1‑239 (MQ=255)
                                                                                                                           atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTC‑AAACAAAAAAAAAAAACGGAGTTGTC‑ATGGTGAGGGAAAGAAAAAAACAAAAAGAAC‑GG‑AAAAAGTTGA‑GACAAATTGTTATG‑AACATTTACCCCACAGTATTT‑ACCCCCAATG‑CTGATGTAGTGGGGGGTAAACAAAAACAACTAAAAAAAACCGAAACGGAGGCGAGgggggc                                                                                                                    >  2:285604/1‑237 (MQ=255)
                                                                                                                            ttCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGAGGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGc                                                                                                                                                                                                                    <  1:112330/145‑1 (MQ=255)
                                                                                                                               aCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTC‑AGACAAATAAAAAAACTGGAGGTGGC‑ATGATGAGCGAAAGTAATAAACAACAAGCAG‑TG‑AAAAAGTTGA‑CAGAGATTGTTGCT‑AAC‑TTTACCGC‑CATGATTTTTACCCGAATGCCTGATGAAGTGGGGGATAAAATAAAAAAACTAAAGGATGCCGAAAAGACGTCGGTGGGGaaaaat                                                                                                                >  1:1136879/1‑237 (MQ=255)
                                                                                                                                  gggagaaaaatTAAAAAACCACATTTTTAGTGGTAGGTTGGGGCGGTAAATTTTTCC‑AAACAAATAAAAAAACGGGAGTTGCC‑AGGATGATCAAAAGTAATAAGCAACAGGCAG‑TA‑AATAAGTGAA‑AGGTGATTGTCGCT‑ATC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTGAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                              <  2:305444/233‑1 (MQ=255)
                                                                                                                                  gggaaaaaaaaaaaaaaACCACATTTTTAGGGGTAGTTTGGGGGGGTGAATTTTTCA‑AAAAAAATAAAAAAACTGGAGTTGCC‑AGGATGAGCAAAAGTAAAAAGCAACAGGCAG‑TG‑AATAAGTTGA‑GAGAGATTGTCGCT‑ATC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                              <  2:93664/233‑1 (MQ=255)
                                                                                                                                  gTGGAAAAAAATATAAACCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGAAAAAAACAAAAACTGGAGTTGCC‑ATGATGAGCAAAAATAAAAAGCAACAGGCAG‑TA‑AAAAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                              <  1:202177/238‑1 (MQ=255)
                                                                                                                                  gTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGGGGTGAATTTTTCA‑AGACAAATAAAAAAACGGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGAAACAGGCAT‑TA‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                              <  1:1356827/238‑1 (MQ=255)
                                                                                                                                   tGGAAAAAAATATAAAACCACATTTTTAGGGGTAGTTGTGGGGGGTGAATTTTTCA‑AAAAAAAAACAAAAACGGGGGTGGCC‑ATGAGGAGCGAAAGTAAAAAGAAACAGGAAT‑TA‑AATAAGTTGA‑CAGAGATTGTCGTT‑AAT‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATc                                                                                                             <  2:1321054/238‑1 (MQ=255)
                                                                                                                                   tGGAAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGGGGCGGTGAATTTTCCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TA‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATc                                                                                                             <  1:516766/238‑1 (MQ=255)
                                                                                                                                                  aacactaTTTTTAGTGGTGTTTTGTGGGGGTGATTTTTACA‑AAACAAATACAAAAACTGGAGTTGCA‑ATAAGGAAGGAAAGTAAAAAAAAAAAGGCAT‑GG‑AAAAAGTGAA‑CAGAGTTTGCCGTT‑AAT‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCg                                                                                             <  2:1201983/233‑1 (MQ=255)
                                                                                                                                                      acaTTTTTAGTGGTAGTTTGTGGCGGTAAATTTTTCC‑AGAAAAATACAAAAACGGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAT‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaa                                                                                         <  1:1111949/239‑1 (MQ=255)
                                                                                                                                                       caTTTTTAGTGTTAGTTTGTGGCGGTGAATTTTTCA‑AGAAAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGTTTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaac                                                                                        <  1:853186/239‑1 (MQ=255)
                                                                                                                                                                tGGTAGTTTGTGGCGGTGAATTTTTCC‑AAAAAAAAAAAAAAACTGGAGTTGCA‑ATGATGAGCGAAAGTAATAACCAACAGGCAG‑TG‑AATAAGTGGA‑CAGAGATTGTCGCT‑AAT‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCaaaa                                                                                <  1:723253/238‑1 (MQ=255)
                                                                                                                                                                    ggTTTGGGGGGGT‑AATTTTTCCAAAAAAAAAAAAAAAACGGGGTTTGCC‑AGGATGAGAAAAATTAAAAACCAACGGACAG‑TA‑AAAAAGTGAA‑CAGAGATTGTCGTT‑ATT‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                           <  2:197434/238‑1 (MQ=255)
                                                                                                                                                                    aGTTTGTGGCGGTAAATTTTTCC‑AGACAAAAACAAAAACGGGAGTTGCA‑ATGATGAGAAAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑AAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                           <  1:1400467/239‑1 (MQ=255)
                                                                                                                                                                    aGTTTGGGGCGGTGAATTTTTCC‑AGAAAAATACAAAAACTGGATTTGCC‑ATGATGAGCAAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTGGA‑CAGAGTTTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                           <  2:92396/239‑1 (MQ=255)
                                                                                                                                                                    aGTTGGTGTGGGGGAATTTTTCA‑AGACAAAGAAAAAATCGGGGGTTGCA‑ATGATGAGGAACAGTATGAAGCAAGAGACAG‑T‑‑AATAATATCATGAGAGAAGACCAGT‑AAC‑TTGACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACATCATGCAAAAAGCGa                                                                           <  1:537661/239‑1 (MQ=255)
                                                                                                                                                                       tggtgGCGGTAAATTTTTCA‑AGACAAATACAAAAACGGGAGTTGCA‑ATGAGGAGCAAAAGAAAAAAGCAACAGGCAG‑TA‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAT‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGAt                                                                          <  1:473104/235‑1 (MQ=255)
                                                                                                                                                                          tgGCGGTGAATTTTTCC‑AGACAAATACAAAAAATGGAGTTGCC‑ATGATGAGCGGAAGTAAAAAGCAAAAAGCAG‑TG‑AATAAATTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGGGGATAAACTAAAACAACTAAAGGATGCCGAAACGTCGTCGGTGGGGGAAATTATCTACCATACGATGTTCGACAACATGCCAAAAACGATTGAc                                                                      >  1:226296/1‑238 (MQ=255)
                                                                                                                                                                                  aaTTTTTCC‑AGAAAAAAAAAAAAACTGGAGTTGCC‑AGGATGAGCAAAAGTAATAAGCAACAGGCAG‑TA‑AATAAGTTGA‑CAGAGATTGTCGTT‑AAT‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGaaa                                                                                                                                    <  2:205260/168‑1 (MQ=255)
                                                                                                                                                                                      tttCA‑AGAAAAATAAAAAAACTGGGGTGGCC‑ATGATGAGCGAAAGTAATAACCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAT‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                                                         <  1:1784224/239‑1 (MQ=255)
                                                                                                                                                                                             gACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGAt                                                                                                                          >  1:205260/1‑168 (MQ=255)
                                                                                                                                                                                               aaaaTACAAAAACTGGAGTTGCC‑ATGAGGAGCGAAAGTAAAAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa                                                  <  1:1120528/237‑1 (MQ=255)
                                                                                                                                                                                                 aaTACAAAAACGGGATTGGCA‑AGGATGAGCGAAAAAAAAAAGAAACGGGAAG‑GG‑AAAAAGTGGA‑CGGAGTTTGTCGTA‑AAT‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGa                                               <  1:297523/239‑1 (MQ=255)
                                                                                                                                                                                                   tACAAAAACTGGAGTGGCC‑ATGATGAGCGAAAGAAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGTTTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGaca                                             <  1:1187682/239‑1 (MQ=255)
                                                                                                                                                                                                    aaaaaacCTGGAGTGGCC‑ATGAGGAGCAAAAGTAATAAGCAACAGGCAG‑TA‑AATAAGTTGA‑CAGAGATTGTCGTT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGacac                                            <  1:285604/237‑1 (MQ=255)
                                                                                                                                                                                                       aaaaCGGGATTTGCA‑ATGATGAGCGAAAGAAATAAGAAACGGGCAG‑TA‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgg                                         <  1:677006/239‑1 (MQ=255)
                                                                                                                                                                                                         aattGGAGTTCCC‑ATGTTGAGCAAAATAAAAAACCAAAGGACAG‑TA‑AATAATTTAC‑GATATTTTGTCCTT‑ATC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                       <  2:432271/236‑1 (MQ=255)
                                                                                                                                                                                                         aaCTGGGGTGGCA‑AGGAGGAGAGAAAGAAAAAAGCAACAGGAAG‑TA‑AATAGGTGGA‑AAGGTATTGTCTCT‑ATC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                       <  2:859721/239‑1 (MQ=255)
                                                                                                                                                                                                         aaCTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGAAACAGGCAG‑TA‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAT‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                       <  1:968692/239‑1 (MQ=255)
                                                                                                                                                                                                         aaCTGGAGTTGCC‑ATAATGAGCGAAAGTAAAAAGAAACAGGAAG‑TA‑AATAATTTGA‑CAGAGTTTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                       <  1:540334/239‑1 (MQ=255)
                                                                                                                                                                                                         aaCGGGAGTTGCA‑ATGATGAGCGAAAGAAAAAACCAACAGGCAG‑TA‑AATAAGTTGA‑CAGAGTTTGTCGCT‑AAT‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                       <  1:1486365/239‑1 (MQ=255)
                                                                                                                                                                                                          aacggAGGTGCCAATGATGAGCAAAAGTAAAAACCAACGGGCAG‑TA‑AAAAAGTTAA‑CGGAGTTGGTCG‑T‑AACTTTTCCCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                       <  2:1841421/236‑1 (MQ=255)
                                                                                                                                                                                                              gAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGAtt                                  >  2:744803/1‑239 (MQ=255)
                                                                                                                                                                                                              gAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGAtt                                  >  1:432271/1‑239 (MQ=255)
                                                                                                                                                                                                                   gCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGt                              >  1:587190/1‑238 (MQ=255)
                                                                                                                                                                                                                   gCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AAAAGTTTAA‑AAGAGATTGTCGTT‑ATC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTa                                                                                                           <  2:752380/161‑1 (MQ=255)
                                                                                                                                                                                                                     c‑ATGATGAGCAAAAGTAAAAAGCAACAGGCAG‑TG‑AATAAGTTGA‑AAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGttct                           <  1:1081368/239‑1 (MQ=255)
                                                                                                                                                                                                                              gCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATg                                                                                                 >  1:752380/1‑161 (MQ=255)
                                                                                                                                                                                                                              gCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTaaa                   >  1:58535/1‑239 (MQ=255)
                                                                                                                                                                                                                               cGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAg                  >  2:450417/1‑239 (MQ=255)
                                                                                                                                                                                                                               cGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAg                  >  1:1664381/1‑239 (MQ=255)
                                                                                                                                                                                                                                 aagaaaaaaaGAAACAGGAAG‑TA‑AATAAGTTAA‑CAGGGTTTGCCCAT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGt                 <  2:149521/230‑1 (MQ=255)
                                                                                                                                                                                                                                     taataaGCAACAGGCAG‑TG‑AATAAGTTAA‑AGGAGATTGTCGCT‑ATT‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATg                                                                                                                         <  2:1466688/130‑1 (MQ=255)
                                                                                                                                                                                                                                     taataaGAAACGGGCAG‑TA‑AATAGGTTGA‑CAGAGTTTGTCGTT‑ATC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                              <  2:1014/141‑1 (MQ=255)
                                                                                                                                                                                                                                      aaaaaGAAAAAGGCAG‑GG‑AAAAGATAGA‑AAAAGATTTTCGTT‑ATC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGTCCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGt             <  1:1198234/234‑1 (MQ=255)
                                                                                                                                                                                                                                       ataaGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTc           >  2:191803/1‑238 (MQ=255)
                                                                                                                                                                                                                                            cAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGCTTATGTTCTTCGTTAAAGTCGGTTCCCGCt      >  1:1791023/1‑238 (MQ=255)
                                                                                                                                                                                                                                               cAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTa                                                                                                               >  1:1466688/1‑130 (MQ=255)
                                                                                                                                                                                                                                               cAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                                    >  1:1014/1‑141 (MQ=255)
                                                                                                                                                                                                                                               cAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTccc  >  1:1262725/1‑239 (MQ=255)
                                                                                                                                                                                                                                               cAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTcc   >  2:650766/1‑238 (MQ=255)
                                                                                                                                                                                                                                               cAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTcc   >  2:960389/1‑238 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                    
TCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCC‑AGACAAATACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAGCAACAGGCAG‑TG‑AATAAGTTGA‑CAGAGATTGTCGCT‑AAC‑TTTACCGC‑CATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCC  >  NC_007779/3204906‑3205381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑