Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,441,668 T→G 13.0% C363G (TGC→GGC)  thiC → phosphomethylpyrimidine synthase ThiC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077793,441,6680TG13.0% 469.9 / 5.2 169C363G (TGC→GGC) thiCphosphomethylpyrimidine synthase ThiC
Reads supporting (aligned to +/- strand):  ref base T (44/94);  new base G (26/2);  total (72/97)
Fisher's exact test for biased strand distribution p-value = 1.24e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 170 total aligned reads displayed.

TTTGCGTAACAGCCCGGTGCCGATCGGTACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGC  >  NC_007779/3441430‑3441902
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                   
       aaCAGCCCGGTGCCGATCGGTACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGTTTTT‑TGC‑G‑AACAGGTG‑Ccttc                                                                                                                                                                                                                                              >  2:1722753/1‑236 (MQ=255)
       aaCAGCCCGGTGCCGATCGGTACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTAACCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGAGG‑TTCGATGAT‑AGC‑G‑ACAAGGTG‑ccctc                                                                                                                                                                                                                                              >  2:1477438/1‑235 (MQ=255)
            cccGGTGCCGATCGGTACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑GTCGATTAT‑GGC‑G‑AAAAGGTG‑CCTCTcccct                                                                                                                                                                                                                                         >  1:1175284/1‑236 (MQ=255)
              cGGTGCCGATCGGTACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCcat‑ca‑t                                                                                                                                                                                                                                    <  1:515692/239‑1 (MQ=255)
              cGGTGCCGATCGGTACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCcat‑ca                                                                                                                                                                                                                                      >  1:491276/1‑238 (MQ=255)
                           tACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑GAAAGGTG‑GCTCTTCCCT‑CC‑T‑CC‑GGG‑AAAATTc                                                                                                                                                                                                                     >  1:636234/1‑238 (MQ=255)
                           tACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTcc                                                                                                                                                                                                                                            <  2:1784025/220‑1 (MQ=255)
                           tACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAAttt                                                                                                                                                                                                                      >  1:1576144/1‑237 (MQ=255)
                           tACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGGG‑CCTCTcc                                                                                                                                                                                                                                            >  1:1784025/1‑220 (MQ=255)
                            aCAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTcc                                                                                                                                                                                                                    <  2:896060/238‑1 (MQ=255)
                                tGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCGGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGCTGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTTGGTTTT‑GGA‑G‑AAGATGTG‑CCTCCCCCCT‑CA‑T‑CT‑GGa‑caaatatctcttt                                                                                                                                                                                                               >  2:414521/1‑229 (MQ=255)
                                tGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGGTTTCGTTTAT‑‑GC‑G‑GAAAGGTG‑GCTCTCCCCC‑CA‑T‑CC‑CGC‑AAATTTTctctt                                                                                                                                                                                                                >  1:1636794/1‑237 (MQ=255)
                                tGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑GAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTAt                                                                                                                                                                                                               >  1:1107737/1‑239 (MQ=255)
                                tGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑GAATGGGG‑CCCCTCCCCT‑CA‑T‑CA‑GGG‑AAATTTCCTCTa                                                                                                                                                                                                                >  1:1536453/1‑238 (MQ=255)
                                tGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGCGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAACCGCCTGACCGGTATCGTCTCCCGCGGCGG‑GTCCGTTTT‑TGG‑G‑CAATGGCG‑GCTCTCCCCTCCA‑T‑CT‑GAC‑AAATTTcacca                                                                                                                                                                                                                 >  2:1662683/1‑234 (MQ=255)
                                 gCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCctct                                                                                                                                                                                                                 <  1:753979/236‑1 (MQ=255)
                                  ccGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCCGTTAT‑GGT‑G‑AAAACGTGTCCCCTCCC‑T‑CA‑T‑CA‑GCA‑AAATTTCcttcttca                                                                                                                                                                                                             >  1:396193/1‑233 (MQ=255)
                                  ccGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCCATTCT‑GGT‑G‑AAAAGGTG‑GCTCTCCCCT‑CC‑T‑CA‑GGC‑AAATTTCCTCTATCa                                                                                                                                                                                                             >  1:25188/1‑239 (MQ=255)
                                     aTCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAaca                                                                                                                                                                                                          >  1:152426/1‑239 (MQ=255)
                                          ccAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTTT‑TGC‑G‑GAATGGAT‑GCTCCCCCCT‑CC‑T‑CC‑GGG‑AAATTTTCTCTTTTCACACttt                                                                                                                                                                                                      >  2:1408819/1‑237 (MQ=255)
                                          ccAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑GTTGATTAT‑GGC‑G‑AAAAGGGG‑GCCCTCCCCT‑CT‑TCCA‑GAA‑AAATTCCctcattataacctc                                                                                                                                                                                                       >  2:43110/1‑227 (MQ=255)
                                            aGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGCTTAT‑GGC‑G‑AAAAGGGG‑ACTCTCCCAT‑CA‑T‑CA‑GGG‑AAATTTCCTCTATCCACCCTTCcg                                                                                                                                                                                                    >  1:1067081/1‑238 (MQ=255)
                                            aGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTTT‑GGC‑G‑AAAAGGTG‑CCCCTCCCCT‑CC‑T‑CC‑GGA‑AAAATTCCTCTATCAACACATcccc                                                                                                                                                                                                   >  1:1552398/1‑237 (MQ=255)
                                            aGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑GACGGTTTT‑GGC‑GAAAATGGTG‑CGT‑TCCCCT‑CATT‑CC‑GGA‑AAA‑TTCCTCTTTCCACACTTccc                                                                                                                                                                                                    >  2:786460/1‑237 (MQ=255)
                                                gcTGGAGAAGTTTAACGGGATCGCCGAAGATCTACCCGGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGTATTACTTCGCTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGGATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGaaa                                                                                                                                                                                               <  2:1208484/239‑1 (MQ=255)
                                                  tGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGTTTTT‑GGG‑G‑AAATGGTG‑GCTCTCCCAC‑CA‑T‑CA‑GGA‑AAAATTTCTCTATTAACACTTCCGCGAAAtt                                                                                                                                                                                             >  1:72828/1‑239 (MQ=255)
                                                  tGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGGTTAT‑GGC‑G‑AAAAGGTG‑GCCCTCCCCC‑CA‑T‑CC‑GGG‑AAAATTCCTCTATCAAAACTCCCGCCGAAtt                                                                                                                                                                                             >  2:575087/1‑239 (MQ=255)
                                                      gaAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTtgt                                                                                                                                                                                          <  1:1204120/238‑1 (MQ=255)
                                                      gaAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTtgt                                                                                                                                                                                          <  1:65559/238‑1 (MQ=255)
                                                            tAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAAATGGG‑CCCCCCCCAC‑CA‑T‑CA‑GGA‑AAATTTTCCCTTTCAAACCTTCCCCGGAAATTGTGGAAACt                                                                                                                                                                                   >  2:737772/1‑239 (MQ=255)
                                                            tAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑GTTGATTTT‑GGC‑G‑GAATGGGG‑CGTCTCCCCC‑CT‑C‑CA‑GGG‑CAAATTCCCCTATCTCAACTTTCCCGAAAATTCTGaaact                                                                                                                                                                                    >  2:720743/1‑236 (MQ=255)
                                                            tAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑GTCGGTTAT‑TGC‑G‑AAATGGGG‑GCGCCTCCCT‑CA‑T‑CC‑GGACAAATTTCTTCTATAAAC‑CCTCCGCCAAATTtgttgaaact                                                                                                                                                                                   >  2:65559/1‑232 (MQ=255)
                                                              aCGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGGTTAT‑TGG‑G‑CAATGGTG‑CCTCTCCCCT‑CA‑T‑CC‑GGG‑AAATTTTCTCTATCCACACTTCCGCCCAATTTTTGGAATCtgt                                                                                                                                                                                 >  2:733166/1‑239 (MQ=255)
                                                               cGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGTTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCtgtg                                                                                                                                                                                <  1:132779/239‑1 (MQ=255)
                                                               cGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCtgtg                                                                                                                                                                                <  1:585765/239‑1 (MQ=255)
                                                               cGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCtgtg                                                                                                                                                                                <  2:896743/239‑1 (MQ=255)
                                                                gggATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGc                                                                                                                                                                               <  2:452216/239‑1 (MQ=255)
                                                                    tCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACTCGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATTGTG‑CCTCCCCCCC‑CC‑T‑CA‑GGA‑AAATTTCCTCTATCAAAACTTCCGCCGAAATTCTGAAACCTTTGCCGCt                                                                                                                                                                           >  2:350117/1‑239 (MQ=255)
                                                                    tCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGGTTAT‑GGC‑G‑AAAAGGTG‑GCGCCCCCCT‑CC‑T‑CC‑GGG‑AAATTTTCCCTTTTCAAACCTTCGCGGAATTTTTGAAAACttgtccgct                                                                                                                                                                           >  2:115739/1‑231 (MQ=255)
                                                                      gCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑Cct                                                                                                                                                                                                                                                <  1:1863822/173‑1 (MQ=255)
                                                                        cGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATg                                                                                                                                                                       <  1:922896/239‑1 (MQ=255)
                                                                            gATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGGTTTT‑TGC‑G‑AAAAGGGG‑CCCCCCCCCC‑CC‑T‑CC‑GGG‑AAATTTTCTCCTTCCAACCTTCCCCGCAATTTTTGTAAACTGTGccccctttttcgt                                                                                                                                                                   >  2:834942/1‑228 (MQ=255)
                                                                                  aCCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTTGATTATGGGG‑G‑AAAGGGGG‑CTCCTCCCTC‑CA‑C‑CA‑GGA‑AAATTTCCCTTTTAAAACCTCCCCCGAAATTTTTTAAA‑CTTTTCCCCCTATTACGttttt                                                                                                                                                               >  2:1590112/1‑235 (MQ=255)
                                                                                       ggAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGGG‑CCTCTCCCAT‑CT‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTtctctgtcg                                                                                                                                                         >  1:892943/1‑238 (MQ=255)
                                                                                                           tgctgGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAAt                                                                                                                                                                                     <  1:797813/190‑1 (MQ=255)
                                                                                                           tgctgGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑Gccc                                                                                                                                    <  2:886549/238‑1 (MQ=255)
                                                                                                           tgctgGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑Gccc                                                                                                                                    <  1:834942/238‑1 (MQ=255)
                                                                                                              tgGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCgg                                                                                                                                 <  2:152426/238‑1 (MQ=255)
                                                                                                               ggAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGtt                                                                                                                               <  1:575087/239‑1 (MQ=255)
                                                                                                                gcaCAGGCCGAGCAAGGTGTGGATTACTTCACTATCCGTGCGGGCGTACTGCTGCGCGATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCACGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGGG‑GCTCTCTCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGGTGGGCGACGGTCTGG‑GCCCCGGtt                                                                                                                               <  1:899542/236‑1 (MQ=255)
                                                                                                                         gAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGa                                                                                                                     <  1:733166/239‑1 (MQ=255)
                                                                                                                           gCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGtt                                                                                                                               <  1:690695/227‑1 (MQ=255)
                                                                                                                                  gtgGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGGG‑CCTCTCCCAT‑CA‑T‑CC‑GGG‑GAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATTACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCCGGTCTATTCAGGACGCCCACGa                                                                                                            >  1:603297/1‑239 (MQ=255)
                                                                                                                                          cTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑GTTGATTAT‑GGCGG‑AAAGGGGC‑CCTCCCCCTT‑C‑‑T‑CC‑GGG‑AAATTTTCTCTTTCCACACCTCCCCGAAAATTTTGGAAACTGTGGCGCTTTTGACGTTTTGCTGTCGCTGGGGCACGGGTTGG‑CCCCCGGGTCTTTTCCGGGCCCCCACCATGaaacc                                                                                                     >  2:1627010/1‑235 (MQ=255)
                                                                                                                                               cTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTTGATTTT‑GGC‑G‑AAATGGGG‑CCTCCCCCCT‑CC‑T‑CC‑GGA‑AAAATTTCTCTATCAAAACCTCCGCGGAATTTTGGAAATCTTTGCCGCTTTTTACGTTTTTCTGTCGCTTGGGGGCGGTTTTC‑GGCCCCGTTCTTTTCCGGCACCCAACCCTGGAgcgccggtt                                                                                               >  2:701208/1‑234 (MQ=255)
                                                                                                                                                tATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTTCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGttt                                                                                               >  1:1081620/1‑238 (MQ=255)
                                                                                                                                                  tCCATGCGGGCGTACTGCTGCGCTATGGGCCGATGACCGCGAACCGCCTGACCGGTATCGTGTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGCG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCATCACCTCCGCGAAATTTGCGAAATCTGTGCCGCTTATGACGCTTCGCTGTCGCTTGGCGAGCGTCTGC‑GCCCCGGTTCTAGTCAGGACGCCAACGATGAAGCGCAGTTTGcc                                                                                            <  2:1166974/239‑1 (MQ=255)
                                                                                                                                                    cATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGa                                                                                          <  1:445379/239‑1 (MQ=255)
                                                                                                                                                     aTGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAg                                                                                         <  2:1107737/239‑1 (MQ=255)
                                                                                                                                                     aTGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAg                                                                                         <  2:264831/239‑1 (MQ=255)
                                                                                                                                                     aTGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAg                                                                                         <  1:9379/239‑1 (MQ=255)
                                                                                                                                                            cGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAAAGGGG‑CCTCTCCCCC‑CC‑T‑CA‑GGG‑AAAATTTCTCTTTCAAAACCTCCGCGAAAATTTTGAAAAATGTGCCCCCTATTACGGTTTGCCGTCGCTGGGCGGCGGGCTTCGGCCCCGGTTCT‑TTCAGGGCCCCCACGCAGAAACGCAGTTTGcccgggcgccta                                                                                  >  2:807050/1‑229 (MQ=255)
                                                                                                                                                             gTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATAc                                                                                 <  1:383979/239‑1 (MQ=255)
                                                                                                                                                               aCTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑c                                                                              <  1:1408819/239‑1 (MQ=255)
                                                                                                                                                                 tgctgcGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGcc                                                                                            <  2:93839/224‑1 (MQ=255)
                                                                                                                                                                     gcgcTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTTGGCTAT‑GGC‑G‑CAATGGGG‑CCCCCCCCCT‑CC‑T‑AA‑GGA‑AAATTTTCCCTTTTAGACCTTCCGCGAGATTTTGGGAATCTGTGCCGCCTTTGTCGTTTTTCTTTTGCCGGGGGACGGGTCGC‑CCCCCGGCTCCACTTAGGAAGCCACACAGGAAGGGCAGTTTGCCGAGCGGCacatcatgggcg                                                                         >  2:928677/1‑228 (MQ=255)
                                                                                                                                                                     gcgcTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGGTTGCCGAGCTGCATACG‑CC‑GGGCg                                                                       >  1:995704/1‑239 (MQ=255)
                                                                                                                                                                       gcTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGaa                                                                     <  2:1081620/239‑1 (MQ=255)
                                                                                                                                                                        cTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGt                                                                                                                                             <  1:424610/169‑1 (MQ=255)
                                                                                                                                                                         tATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACt                                                                   <  2:1042303/239‑1 (MQ=255)
                                                                                                                                                                                  aTGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCCT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTTAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAAt                                                          >  1:172919/1‑239 (MQ=255)
                                                                                                                                                                                  aTGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCcg                                                                                                                                                                                                    <  2:242105/104‑1 (MQ=255)
                                                                                                                                                                                   tGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑GTCGATTAT‑TGC‑G‑AAAAGGTG‑CCTCTCCCCT‑CC‑T‑CAGGGA‑AAATTTCC‑CTATTAACACATCCCCGGAAATTTTGAAATCTGTGCCGCCTTTGAAGGTTTGCTGTCTCTGGGCGGCGGGGTTC‑GCCCCCGGTCCCTTTACGACGCCCACGATGGAACGCCGGTTTCCGGGGTGCCTACG‑CTGGGGCGAACTGCCCAAAAt                                                          >  2:1224901/1‑239 (MQ=255)
                                                                                                                                                                                      ccGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGcc                                                      <  1:1677648/239‑1 (MQ=255)
                                                                                                                                                                                      ccGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGcc                                                      <  2:170151/239‑1 (MQ=255)
                                                                                                                                                                                      ccGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGcc                                                      <  1:350117/239‑1 (MQ=255)
                                                                                                                                                                                      ccGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGcc                                                      <  1:43110/239‑1 (MQ=255)
                                                                                                                                                                                      ccGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGcc                                                      <  2:1395643/239‑1 (MQ=255)
                                                                                                                                                                                        gcgAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTg                                                    <  2:216751/239‑1 (MQ=255)
                                                                                                                                                                                              cGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAata                                              <  2:180500/239‑1 (MQ=255)
                                                                                                                                                                                              cGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAata                                              <  1:807050/239‑1 (MQ=255)
                                                                                                                                                                                                 cTGACCGGTATCGTCTCTCGCGGCGG‑TTCGAGTAT‑GGC‑G‑AAAAGGTG‑CCCCCCCCCT‑CC‑T‑CA‑CGG‑AAAATTCCTCTTTCAACACTTCCGCCGAAATTGTGAAAACTGTGCCGCCTATGACGTTTCGCTGTCGCCGGGGGACGGGCTGC‑GCCCCGGTGCTATTTAGGACGCCAACCATGAAACGACGTTTGCCGGGCGCGCTACGCCG‑GGGGGAACT‑ACCAAAAATTCCTGGGAATATgg                                           >  2:1448131/1‑238 (MQ=255)
                                                                                                                                                                                                   gACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACg                                         <  1:170584/239‑1 (MQ=255)
                                                                                                                                                                                                    aCCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGaa                                                                     <  2:284274/210‑1 (MQ=255)
                                                                                                                                                                                                     ccGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTg                                       <  2:491276/239‑1 (MQ=255)
                                                                                                                                                                                                     ccGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTg                                       <  1:203571/239‑1 (MQ=255)
                                                                                                                                                                                                     ccGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTg                                       <  1:708472/239‑1 (MQ=255)
                                                                                                                                                                                                     ccGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTg                                       <  1:1614785/239‑1 (MQ=255)
                                                                                                                                                                                                     ccGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTg                                       <  1:115739/239‑1 (MQ=255)
                                                                                                                                                                                                         tATCGTCTCTCGCGGCGG‑TTCGCTTAT‑TGC‑G‑AAATGGTG‑CCTCTCCCCT‑CA‑T‑CA‑GGA‑AAATTTTCTCTATCAACACTTCCGCGAAATTTGTGAAAACTGTGCCGCTTATGGCGGTTCGCTGTCGCTGGGCGAAGGTCTGC‑GCCCCGGGTCTATTCAGGACCCCAAAGATGAAGCGCAGGTTGCCGAGCCGCa                                                                                    >  1:290009/1‑192 (MQ=255)
                                                                                                                                                                                                           tCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGtg                                 <  1:949934/239‑1 (MQ=255)
                                                                                                                                                                                                            cggtcctcGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGGG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGtga                                <  2:67401/234‑1 (MQ=255)
                                                                                                                                                                                                                            ttCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAAGGCCCa                  <  1:590437/238‑1 (MQ=255)
                                                                                                                                                                                                                            ttCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAAGGCCCa                  <  1:786460/238‑1 (MQ=255)
                                                                                                                                                                                                                                      ggC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTg         >  1:848326/1‑238 (MQ=255)
                                                                                                                                                                                                                                             aaTGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAATGCCCAGGCCACGTGCCGATg   <  2:1847476/239‑1 (MQ=255)
                                                                                                                                                                                                                                             aaTGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGAt    <  2:1271785/238‑1 (MQ=255)
                                                                                                                                                                                                                                             aaTGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGAt    >  1:1271785/1‑238 (MQ=255)
                                                                                                                                                                                                                                              aTGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGc  <  1:13064/239‑1 (MQ=255)
                                                                                                                                                                                                                                              aTGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGc  <  2:1099617/239‑1 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                   
TTTGCGTAACAGCCCGGTGCCGATCGGTACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGG‑TTCGATTAT‑GGC‑G‑AAATGGTG‑CCTCTCCCAT‑CA‑T‑CA‑GGA‑AAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGC‑GCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACG‑CT‑GGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGC  >  NC_007779/3441430‑3441902

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑