Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,908,726 G→T 14.9% Q187K (CAA→AAA)  Y75_RS19370 ← D‑xylose ABC transporter substrate‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077793,908,7260GT14.9% 472.6 / 11.8 168Q187K (CAA→AAA) Y75_RS19370D‑xylose ABC transporter substrate‑binding protein
Reads supporting (aligned to +/- strand):  ref base G (44/94);  new base T (26/2);  total (72/96)
Fisher's exact test for biased strand distribution p-value = 1.24e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 171 total aligned reads displayed.

GTTTATACACCGTCATAGTTTGCGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATACGGTCGTAAGCTAATACTTTA  >  NC_007779/3908489‑3908964
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                   
  ttATACACCGTCATAGTTTGCGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑TGT‑c                                                                                                                                                                                                                                                 >  1:604232/1‑239 (MQ=255)
   tataCACCGTCATAGTTTGCGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTTCGCGTTTTTCATAAATTTCAATGAGTTTTTCTGGGACCCG‑CCCT‑CAAACCCTT‑TGT‑c                                                                                                                                                                                                                                                 >  2:1311129/1‑238 (MQ=255)
   tataCACCGTCATAGTTTGCGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTTCTTAATTTTTAATTGGTTTTTCGGTAACCAG‑CCAT‑CAACCCCTT‑TGT‑c                                                                                                                                                                                                                                                 >  2:1765195/1‑238 (MQ=255)
       cacCGTCATAGTTTGCGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCaa                                                                                                                                                                                                                                            <  2:1435306/239‑1 (MQ=255)
          cGTCATAGTTTGCGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGGTTTTCATAATTTTTTATGCGTTTTTCGGTAACCAG‑CCCT‑CAACCCCTT‑GGT‑TACCaaag                                                                                                                                                                                                                                          >  1:501932/1‑236 (MQ=255)
          cGTCATAGTTTGCGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGCTTGCGCGTTGTCTCTAATTTTTAATGCGTTTTTTGGTTATCAG‑CACT‑CAACCCCTT‑GGT‑CATCAACg                                                                                                                                                                                                                                          >  2:862365/1‑238 (MQ=255)
            tCATAGTTTGCGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTGCGCGTTTTTCATAATTTTCAATGCGTTTTTCGGTAACCAG‑CCAC‑TAAACCATT‑TTG‑CACCAAcca                                                                                                                                                                                                                                         >  2:934382/1‑235 (MQ=255)
                   ttGCGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑tt                                                                                                                                                                                                                                <  2:773973/238‑1 (MQ=255)
                      cGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTTCGCGGTTTTCATAAATTTCAATGCGTTTTTCGGTAACCAG‑CCATCCACCCCTTT‑GGT‑CCCAAACAAC‑TTAA‑ttttt                                                                                                                                                                                                                             >  1:413319/1‑238 (MQ=255)
                      cGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTGTGCGGTTTTCATAATTTTTAATGCGTTTTTCGGTAAACAG‑CCAT‑CCACCCCCT‑TGT‑CACCAACGACTTTTA‑tttttt                                                                                                                                                                                                                            >  2:1290053/1‑238 (MQ=255)
                      cGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGGGCGGTTTTCATAATTTTTAATTCGTTTTTCGGTAACCAA‑CCAT‑CAACCCATT‑AGT‑CACCAACGCATTTTA‑ttttt                                                                                                                                                                                                                             >  2:1410544/1‑238 (MQ=255)
                      cGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTTCGGGAACCAG‑CCAT‑CAACCCCAT‑GGT‑CACCAACGAATTTTA‑ttttt                                                                                                                                                                                                                             >  1:1130710/1‑238 (MQ=255)
                      cGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGGTTTCCATAATTTTTAATGCGTTTTCCGGTAACCAG‑CCCT‑CAACCCCTT‑GGT‑CACCCACGACTTTTA‑ttttt                                                                                                                                                                                                                             >  1:395523/1‑238 (MQ=255)
                            ggCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAAt                                                                                                                                                                                                                      <  2:1558090/239‑1 (MQ=255)
                            ggCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAAt                                                                                                                                                                                                                      <  1:1311129/239‑1 (MQ=255)
                            ggCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAAt                                                                                                                                                                                                                      <  1:1183027/239‑1 (MQ=255)
                            ggCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAAt                                                                                                                                                                                                                      <  1:1164644/239‑1 (MQ=255)
                             gcagcaATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGCGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGCTAGCGAGGATTTCAAAATATTTAATGTGTTTTCCCTTAACCAA‑CCCC‑CAACCCCCT‑GTT‑ACCCCACCACCTTTA‑TTTTTCCGTaaac                                                                                                                                                                                                                     >  2:1081177/1‑237 (MQ=255)
                                gcaATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTGCGCGTTTTTCATAATTTTTAATGTGTTTTTCGGTTAACAG‑CCAT‑CAACCCATT‑GGG‑CACCCACGACTTTTA‑TTTTTTCGGAAACaaa                                                                                                                                                                                                                  >  2:356584/1‑238 (MQ=255)
                                   aTACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑Ta                                                                                                                                                                                                              <  1:781437/239‑1 (MQ=255)
                                    tACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑Taa                                                                                                                                                                                                             <  1:920338/239‑1 (MQ=255)
                                           aaTAACTGCGAGATCCGCATCCTGGCAGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTGAACCATATTCCCACTTTTCAATGCGGTTTTCGGTTAACAC‑CCAT‑CAACCCATTCGAT‑CACAAAC‑ACCTTAT‑TTTTTCTCGTAACAACG‑TAACGttt                                                                                                                                                                                                        >  2:1155380/1‑237 (MQ=255)
                                            aTACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTGTGCGTTTTCCCTAATTTTTAATGCGTTTTTCTGTAACCAA‑CCAT‑CAACCCCTT‑GGT‑ATCCAACGACTTTAA‑TTTTTCCGGAAACAACG‑TAAGGTTTTaa                                                                                                                                                                                                     >  2:245144/1‑239 (MQ=255)
                                            aTACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTTCGGAATCAACG‑TAAGGGTTTaa                                                                                                                                                                                                     >  1:618092/1‑239 (MQ=255)
                                             tACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAac                                                                                                                                                                                                    <  1:445378/239‑1 (MQ=255)
                                                cTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGTGCGTTTTTCCTACTTTTTAATGCGTTTTTCTTGAACCAG‑CCCA‑CAACCCATT‑GGT‑CACCACCGACTTTAA‑TTTTTTCGGGAGCAACG‑CAAGGTTTTTacaca                                                                                                                                                                                                 >  2:1766938/1‑238 (MQ=255)
                                                cTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCTTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CCCCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACt                                                                                                                                                                                                 <  1:1030818/239‑1 (MQ=255)
                                                cTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACt                                                                                                                                                                                                 <  1:579821/239‑1 (MQ=255)
                                                cTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACt                                                                                                                                                                                                 <  1:140909/239‑1 (MQ=255)
                                                cTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACt                                                                                                                                                                                                 <  1:1388752/239‑1 (MQ=255)
                                                 tGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCACTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTGCGCGGTTTTCCTAATTTTTAATGCGTTTTTCTGTAAACAA‑CCAT‑CCACCCACT‑TGT‑CACCAACGAATTTTA‑TTTTTTCTGAAACAACA‑TAAAGtttttaaacat                                                                                                                                                                                                >  2:1011825/1‑232 (MQ=255)
                                                  gCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTGTGCGGTTTCCATAATTTTCTATTCGTTTTTCGTTTACCAA‑CCCT‑CCAACCACT‑GGTACACCACCACCTTTAT‑TTTTTCCGCAACAACCG‑TAAGATTTAAaccatt                                                                                                                                                                                                >  2:445378/1‑235 (MQ=255)
                                                  gCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTATCGCGTTTTCCCTAATTTTTAATTCGGTTTTCCGTAAACAG‑CCAT‑CCACCCCCT‑GGT‑CACCAACCACTTTAA‑CTTTTCCGGAATCAACG‑TAAAGTTTTTAAACtt                                                                                                                                                                                                >  2:1122736/1‑238 (MQ=255)
                                                  gCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGGGCGGTTTTCCTAATTTTTTATTCGTTTTTCGGTGACCAG‑CCCT‑CAACCCCTT‑TGG‑CACCACCGAATTTTA‑TTTTTCCGGAATCAACGAAAAGGTTTTaaactt                                                                                                                                                                                                 >  2:1175926/1‑234 (MQ=255)
                                                  gCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGATTGCGCGTATTCCCTAATTTTTAACAGGTTTTTCGCTAACCCG‑CCAT‑CAACCCCTT‑GGT‑CACCAAATTCATTAA‑TTTTTTCGGTATCAACC‑TCAGGTTTTTACACttt                                                                                                                                                                                               >  2:1310380/1‑239 (MQ=255)
                                                          cGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTc                                                                                                                                                                                       <  1:1766938/239‑1 (MQ=255)
                                                          cGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTc                                                                                                                                                                                       <  2:818864/239‑1 (MQ=255)
                                                               ccTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGgcg                                                                                                                                                                                  <  1:961674/239‑1 (MQ=255)
                                                                  ggCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGTGCGGTTTTTATAATTTTTAATTCGTTTTTCGGTAAACAG‑CCAT‑CAACCCATT‑GGT‑CACCAACATATTTTA‑TTTTTCTGGAATACACG‑TAAGGGTTTAACACTTTCATTTTTTCGGCGC‑gg                                                                                                                                                                              >  2:979199/1‑239 (MQ=255)
                                                                     cGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGaa                                                                                                                                                                            <  1:245144/238‑1 (MQ=255)
                                                                            tGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTgg                                                                                                                                                                    <  1:1074760/239‑1 (MQ=255)
                                                                             gCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTGCGCGTTTTCCCTAACTTTTAATGAGTTTTCCGGGAACCCG‑CCAT‑ACACCCAAT‑TGT‑CACCAACGACTTTAA‑TTTTTTCGGAAAAAACG‑TAAGGTTTTAACACTTTCATTTTTCCGGCGC‑GGAACAGCTTGGc                                                                                                                                                                   >  1:1004523/1‑239 (MQ=255)
                                                                              ctccTTTCCCTGTAAAACCTGTCGCGCTTAATGCCTGAATTGCCCCGCCTGCGGTGGCATCGTTTGAGGCGACTACAGCATCAATTTTGTTATTATTGGC‑GCTTAGCTCGTTTTTCGTAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑TGT‑CTCCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCg                                                                                                                                                                  <  2:729532/236‑1 (MQ=255)
                                                                               tACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCg                                                                                                                                                                  <  2:494/238‑1 (MQ=255)
                                                                               tACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCg                                                                                                                                                                  <  2:55022/238‑1 (MQ=255)
                                                                               tACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCg                                                                                                                                                                  <  1:1136955/238‑1 (MQ=255)
                                                                                    tCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTTCATAATTTTTAATGCGTTTTTCGGTAACCAG‑CCAT‑CAACCCCTT‑GGG‑CACCAACGACTTTAA‑TTTTTTCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTTTCCGGCGC‑GGAACAGCTTGGCgttgttt                                                                                                                                                            >  1:389516/1‑238 (MQ=255)
                                                                                         gATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGGTAGTGCGTTTTCCCTAATTTTTAATTCGTTTTTCGGTAACCAG‑CCCT‑CAACCCATT‑TGT‑CCCCAACCACTTTAA‑TTTTTTCGGAATCAAAG‑TAAAGGTTTAAAACTTTTATTTTTTCCGCGC‑GGGAAAGACTGGCgtttttttttt                                                                                                                                                        >  2:1050360/1‑233 (MQ=255)
                                                                                          aTAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCt                                                                                                                                                                       <  1:1282341/222‑1 (MQ=255)
                                                                                             aaCCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTGCGCGGTTTCTATAATTTTTAATGCGTTTTTCTTTGACCAG‑CCAT‑CAACCCATT‑TGT‑CACCCACGGCTTTTA‑TTTTTTCGGAATCAACG‑TAAGGGTTTTACACTTTTATTTTTTCTGCGC‑GGAACAGCTTGGCGGTGTTTTTTAcccg                                                                                                                                                    >  2:621743/1‑236 (MQ=255)
                                                                                                cTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTc                                                                                                                                                                                       <  1:1749241/201‑1 (MQ=255)
                                                                                                  tGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTGCGCGGTTTTCATAATTTTTCATGTGTTTTTCTGGTACCAGCCCAC‑CAACCC‑TT‑GGT‑TCCCAACGAATTTAATTTTTTCCGAAATAACCG‑AAAGTTTTTAA‑ACATTCATTTTTCTTGCGC‑GGGACACATTGGGGTTGTTTTATACCGGGGata                                                                                                                                               >  2:172090/1‑236 (MQ=255)
                                                                                                  tGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCCT‑CCACCCATT‑GGT‑CACCCACGACTTTAA‑TTTTTTCCGGATCAACG‑TAAGGGTTTAACACTTTCATTTTTTCGGCGC‑GGGACAGCTTGGCGTTGTTATCTACCGGCGAgcc                                                                                                                                              >  1:1116446/1‑239 (MQ=255)
                                                                                                   gcgcgcTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑TGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAGCCAG‑CCAT‑CAACCCATT‑GGT‑CGCCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACGCTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAgccg                                                                                                                                             <  1:106165/239‑1 (MQ=255)
                                                                                                    cgcgcTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGGTTTTCATAATTTTTAATGCGTTTTTCGGTAACCAG‑CCAT‑CAACCCCTT‑TGT‑CACCCACGACTTTAA‑TTTTTTCGGAATCAACG‑TAAGGTTTTTACACTTTCATTTTTCCGGCGC‑GGGACAGCTTGGCGTTGTTATCTACCGGCGAgccg                                                                                                                                             >  1:708549/1‑238 (MQ=255)
                                                                                                          tAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGGTTTTCATAATTTTTAATGCGTTTTTCGGGAACCAG‑CCAT‑CAACCCCTT‑TGT‑CACCCACGACTTTAA‑TTTTTTCGGAATCAACG‑CAAGGGTTTAACACTTTCATTTTTTCCGCGC‑GGaa                                                                                                                                                                            >  2:1749241/1‑201 (MQ=255)
                                                                                                           aaTGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAg                                                                                                                                     <  1:643893/239‑1 (MQ=255)
                                                                                                           aaTGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAg                                                                                                                                     <  1:1730753/239‑1 (MQ=255)
                                                                                                            aTGCCTGAATTGCCCCACCTGCGTTTGCATCGTTTGAGTCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAATGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAgg                                                                                                                                    <  2:1786790/239‑1 (MQ=255)
                                                                                                            aTGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAgg                                                                                                                                    <  1:1765195/239‑1 (MQ=255)
                                                                                                            aTGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAgg                                                                                                                                    <  2:934424/239‑1 (MQ=255)
                                                                                                            aTGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAgg                                                                                                                                    <  2:279566/239‑1 (MQ=255)
                                                                                                             tGCCTGAATTGCCCCACCTTCTGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGa                                                                                                                                   <  2:1468189/239‑1 (MQ=255)
                                                                                                                   aaTTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTTGCGCGGTTTCCCTAATTTTTAATGCGTTTTCCGGTAAACAG‑CCAT‑CAACCCATT‑GGT‑CACCCACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAAAACTTTCATTTGTTCGGCGC‑GGAACAGCTTGGCGTTGTTATATACCGGCGAGCCGCGCATCAggaaggaaa                                                                                                                             >  1:1343589/1‑238 (MQ=255)
                                                                                                                   aaTTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTTCATAATTTTCAATGCGGTTTCCGGTAACCAG‑CCAC‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTTCCGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAAt                                                                                                                             >  1:1486678/1‑239 (MQ=255)
                                                                                                                   aaTTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAACGCGTTTTCCATAATTTTCAAAGCGTTTTTCCGTAACCAA‑CCAT‑CAACCCCTT‑GGT‑CACCCACGAATTTAA‑TTTTTCCGGAATCAACG‑TAAGGGTTTAAAAATTTCATTTTTCCGGCGC‑GGAACAGCTTTGCGTTGTTATTTACCGGCGAGCCGCCCATCAGGAAGTAAt                                                                                                                             >  1:130891/1‑239 (MQ=255)
                                                                                                                       gCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGGTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTTTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTa                                                                                                                           >  1:485165/1‑237 (MQ=255)
                                                                                                                         cccACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGGTTTTCATAATTTTTCATTCGTTTTTCTGTAACCAG‑CCAT‑CAAACCCTT‑TGT‑TTCCAACGACTTTTA‑TTTTTTCTGAATCAACC‑TAAGGTTTTAACACCTTCATTTTTTCGGCGC‑GGGACAGCCTGGCGTTGTTTTTTACCCGGGAGCCCCCCGCCCCGGAGTAATTACCtt                                                                                                                       >  2:690093/1‑239 (MQ=255)
                                                                                                                          ccACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTg                                                                                                                      <  1:1410544/239‑1 (MQ=255)
                                                                                                                          ccACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTg                                                                                                                      <  1:348620/239‑1 (MQ=255)
                                                                                                                             ccTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTTCATAATTTTTAATGCGTTTTTCCGTAACCAG‑CCAT‑CAACCCCTT‑GGT‑CACCAACGACTTTAA‑TTTTTTCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCgg                                                                                                                   >  1:1689620/1‑239 (MQ=255)
                                                                                                                                     ggCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAata                                                                                                            <  1:1219035/238‑1 (MQ=255)
                                                                                                                                     ggCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAata                                                                                                            <  2:816032/238‑1 (MQ=255)
                                                                                                                                         tCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGAc                                                                                                       <  1:862365/239‑1 (MQ=255)
                                                                                                                                                aGGCAACTACAGCATCAATTTTGTTATTATTGGCGGGTTAG‑GCGGTTTTCATAATTTTTAATACGTTTTTCTGTAACCCG‑CCCT‑CCAACCATT‑GGG‑TACCAACGACTTTAA‑TTTTTTCGGAATCAACG‑TAAAGGTTTTACAATTTCATTTTTTCGGCGC‑GGGACAGCTTGGCGGTGTTTTTTAACGGCGTAGCGCCCCACAGGAAGTAAATAACCTGCGGTACAATAACGAACCG‑GGCt                                                                                               >  2:1740052/1‑239 (MQ=255)
                                                                                                                                                      cTACAGCATCAATTTTGTTATTATTGGC‑GGTTATCGCGGGTTCCATAAATTTTAATGTGTTTTCCGGGTAACAG‑CCAT‑CAAACCCCT‑TGT‑CACCCAACACTTTTA‑TTTTTTCCGGATCAACG‑TAAGGGTTTTACACCTTCATTTTTCCGGCGCGGGAACA‑CTTGGCGTTGTTTTTTACCGGCGAGGCGCCCATCCGGAAGGAAATATCCTTCGGAACAATATCCACCCGAGGCtttt                                                                                            >  2:1078024/1‑237 (MQ=255)
                                                                                                                                                                                   ggTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCga                                                             <  1:1122736/239‑1 (MQ=255)
                                                                                                                                                                                      tAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCgaaag                                                          <  2:1743318/239‑1 (MQ=255)
                                                                                                                                                                                              tttACATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATaa                                                  <  2:1175939/239‑1 (MQ=255)
                                                                                                                                                                                                          tCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATcc                                      >  2:1837716/1‑239 (MQ=255)
                                                                                                                                                                                                           cAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCg                                     <  2:1228944/239‑1 (MQ=255)
                                                                                                                                                                                                            aaTGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGaa                                                                                                                 >  1:131807/1‑163 (MQ=255)
                                                                                                                                                                                                            aaTGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGaa                                                                                                                 <  2:131807/163‑1 (MQ=255)
                                                                                                                                                                                                            aaTGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGc                                    >  1:952319/1‑239 (MQ=255)
                                                                                                                                                                                                                    ttCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTaa                            <  1:445576/239‑1 (MQ=255)
                                                                                                                                                                                                                          tAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATa                       <  2:1116446/238‑1 (MQ=255)
                                                                                                                                                                                                                          tAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCGTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGACATCCGCATCGTTAATCATa                       <  1:1272659/238‑1 (MQ=255)
                                                                                                                                                                                                                          tAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCAGGAATCAACG‑TAAGGCTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGCTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTACACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATACGCAGCGTTAATCATAc                      >  2:167892/1‑239 (MQ=255)
                                                                                                                                                                                                                          tAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TGTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATa                       <  1:654426/238‑1 (MQ=255)
                                                                                                                                                                                                                          tAACCAG‑CCAT‑CAACCCAGT‑TGT‑CACCAACGACTTTAA‑TTTTTGCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATa                       <  2:102291/238‑1 (MQ=255)
                                                                                                                                                                                                                           aaCCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATAc                      <  1:1011825/238‑1 (MQ=255)
                                                                                                                                                                                                                                   cAT‑CAACCCATT‑GGT‑CACCAACGACTTTTA‑TGTTTCCGGAATCAACG‑TAATGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATACGGTCg                 <  2:1586150/236‑1 (MQ=255)
                                                                                                                                                                                                                                   cAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATACGGTCg                 <  2:389516/236‑1 (MQ=255)
                                                                                                                                                                                                                                   cAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATACGGTCg                 <  1:754329/236‑1 (MQ=255)
                                                                                                                                                                                                                                   cAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATACGGTCg                 <  2:952319/236‑1 (MQ=255)
                                                                                                                                                                                                                                         aCCCATT‑GGT‑CACCCACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATACGGTCGTAAGCTaa         <  2:523146/239‑1 (MQ=255)
                                                                                                                                                                                                                                         aCCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATACGGTCGTAAGCTaa         <  2:395523/239‑1 (MQ=255)
                                                                                                                                                                                                                                             aTT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATACGGTCGTAAGCTAATACt     >  1:1703075/1‑239 (MQ=255)
                                                                                                                                                                                                                                                 ggT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATACGGTCGTAAGCTAATACTTTa  <  1:1155380/239‑1 (MQ=255)
                                                                                                                                                                                                                                                 ggT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGACGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATACGGTCGTAAGCTAATACTTTa  <  2:523532/239‑1 (MQ=255)
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GTTTATACACCGTCATAGTTTGCGTACCGGCAGCAATACGTTTAATACCTGCGAGATCCGCATCCTGGCCGGAGATTGCTACTTTCCCTGATAAACCTTGCGCGCTTAATGCCTGAATTGCCCCACCTGCGGTGGCATCGTTTGAGGCAACTACAGCATCAATTTTGTTATTATTGGC‑GGTTAGCGCGTTTTCCATAATTTTCAATGCGTTTTCCGGTAACCAG‑CCAT‑CAACCCATT‑GGT‑CACCAACGACTTTAA‑TTTTTCCGGAATCAACG‑TAAGGTTTTAACACTTTCATTTGTCCGGCGC‑GGAACAGCTTGGCGTTGTTATCTACCGGCGAGCCGCCCATCAGGAAGTAATTACCTTGCGGAACAATATCGACCAG‑GGCTTTTGCCTGCAGTTCACCGACTTTTTCGTTATCGAAAGAAATATAAAAATCGATATCCGCATCGTTAATCATACGGTCGTAAGCTAATACTTTA  >  NC_007779/3908489‑3908964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑