| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,116,546 | T→A | 9.7% | V174V (GTA→GTT) | mdtG ← | multidrug efflux MFS transporter MdtG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 1,116,546 | 0 | T | A | 9.7% | 359.7 / 2.0 | 151 | V174V (GTA→GTT) | mdtG | multidrug efflux MFS transporter MdtG |
| Reads supporting (aligned to +/- strand): ref base T (52/78); new base A (13/3); total (65/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.51e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 157 total aligned reads displayed.
TGACGTTACCCGCCAGTTCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAGATATTTTGTGCCAGCCCCATCAACACCATCACGATG > NC_007779/1116308‑1116783 | tGACGTTACCCGCCAGTTCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAAt > 1:1850041/1‑239 (MQ=255) cGTTACCCGCCAGTTCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATAc < 1:805690/238‑1 (MQ=255) cGTTACCCGCCAGTTCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATAc < 1:807448/238‑1 (MQ=255) aCCCGCCAGTTCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATAc < 1:388558/234‑1 (MQ=255) aCCCGCCAGTTCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAAAACCGGAc > 1:1760380/1‑239 (MQ=255) aCCCGCCAGTTCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAAAATACCGGAc > 1:1138462/1‑239 (MQ=255) cccGCCAGTTCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACg > 1:820569/1‑239 (MQ=255) cccGCCAGTTCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACg < 1:1439349/239‑1 (MQ=255) ccAGTTCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCCAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGGAATAAAGAAAAACGGACGaaaa > 2:1135563/1‑238 (MQ=255) aGTTCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGCAAAAAAAAAAACCgggaggaaacc > 2:1580963/1‑230 (MQ=255) tCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGcc < 2:1693977/236‑1 (MQ=255) tCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCg < 2:802090/237‑1 (MQ=255) ggACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTa < 1:1551921/239‑1 (MQ=255) gCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAAAACCGGACGTAAGCCGTAGATATCGGCGAGc > 1:422688/1‑239 (MQ=255) tCAGAATGGGGGCAATTGCGCCCGTCGCCCCCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGCGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAAAAAAGAATACATGACATAAACCGTAGCTATCGGCGAgaacg > 2:824739/1‑235 (MQ=255) tCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAg > 1:1691689/1‑238 (MQ=255) tCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAACTAACGGCGAGCAg > 1:1270998/1‑238 (MQ=255) tCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAAAAAAAAAAACCGGACGGAAAACCTAGCTAAAGGCGGGGAgg > 2:1206192/1‑239 (MQ=255) tCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGGAATAAAGAATAACGGACGTAAGACCTATATAACGGCGAgagag > 2:103886/1‑235 (MQ=255) aGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAAAAAAAAATACCGGGCGTAAGGCGTAGCTATCGGCGAGGAGgcc > 1:457984/1‑239 (MQ=255) aTGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGgccgcc < 2:820569/239‑1 (MQ=255) ggggCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCgccag > 1:979308/1‑238 (MQ=255) ggggCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGGAATAAAGAAAAACGGAAGGAAGCCGTAGCTAACGGCGAGcgaggcgccca > 2:965528/1‑228 (MQ=255) gggCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATAACGGAAGGAAGACGTAGCTATCGGCGAGGAGGCCgccagc > 2:172796/1‑238 (MQ=255) ggCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCgccagcca > 1:1425374/1‑239 (MQ=255) ccgggtgccgccGGGATGATTAACGTGGGGACTAACAGGTTGGG‑TGCCTGTTTCGTGTTTTTAAGTGATGCCACCGCTCCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTTATGCAAAACA‑GGGTGACGAAAAAGCGGATTATGAGCACACGGGCGGTAATAAAGAATACCGGACTTAAGCCGTAGCTACCGGGGGGCAGGCCGCCAGCGATTGGTCCGAg < 2:1748140/233‑1 (MQ=255) cGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCCCCAGCCATTGGGCCGAGCAAc > 1:1128394/1‑238 (MQ=255) ccTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGcacca < 1:420400/239‑1 (MQ=255) gatTAACTTAGTGACAACCCGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACCCTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTTTCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAAcgc < 2:642995/239‑1 (MQ=255) gatTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAAcgc < 1:1332754/239‑1 (MQ=255) gatTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAAcgc < 1:640570/239‑1 (MQ=255) atTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGACTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAAcgc > 1:285853/1‑238 (MQ=255) ttAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAAcgccg < 1:1865456/239‑1 (MQ=255) tAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCCTTGGGCCGAGCAACGCACCCCCAAcgccc > 1:1586714/1‑237 (MQ=255) agagACAAACGGGCTGCG‑TCCCGTTTTCGGGTTTTTAGGTGATGTCCCCACTTCCCGCAGGTGCGGCACTTTTTTTTTGCTGACCGGTTGAATTTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAACCATAGTATGAGCAACCGGGAGGAAATAATGAATCCCGGGCGTAGCCTGTAGCTATCTGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTgg < 2:1227661/236‑1 (MQ=255) aGTGACAAACAGGCTGAG‑TTCCAGTTTCGGGTTTTTAAGTGATGTCACCATTTCCCGCCTGTGCAGCATCTTTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGAAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGCGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTgg < 2:1290468/239‑1 (MQ=255) aGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTgg < 1:268601/239‑1 (MQ=255) agtcccaaCCGGGTGAGTTACAAGTTCGGGGTTTTTATGGGCTGTCCCCACTCCCCGCGTTGGCAGAATCCCTTTTTTGCTAAACGGCTGGAGTTTTTCTCTGATGCAAAACG‑GGGGGACGAAAAGGCAGAATATGAGCCCGCGGGGGGTAAGAAAGAAACCCGGACGTAAGCCGAAGCTATCGGCGAGCAGGCGCCCAGCCAATGGGCCGAGCAACGCACCACTAACGCCGCCTGTgg < 2:328119/233‑1 (MQ=255) tGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTgg < 1:1019921/237‑1 (MQ=255) tGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAAAACCGGACGTAAGCCGGAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCCCCACCAACGCCGCCCGTGgag > 1:1380991/1‑239 (MQ=255) gCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAACCGTAGCTATCGGCGAGCAGGCCGCCAGCCAATGGGCCGAGAAACGCACCACTAACGCCGCCTGTGGAGAGCGGACCCa > 1:1723470/1‑239 (MQ=255) gCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGGAATAAAAAATAACGGACGGAAAACGTAGCTATCGGCGAGCGGGGCCCCAGGCCATGGGCCGGGCAAAGCCCCACTAAACCCCCCCGGGGGGAGCggaacc > 2:1019921/1‑233 (MQ=255) aCCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGccc < 1:1213294/238‑1 (MQ=255) aGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGGGGAGAGCGGACCCCGCGCCCAGc > 1:235397/1‑238 (MQ=255) gTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGGGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAAAAAAGAAAACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCCTTGGGCCGAGCAACGCACCACTAACCCCGCCTGTGGGGAGGGTACCCAGCGccccccc > 1:1463807/1‑234 (MQ=255) ttttAAGGTAGGTCACCGCTTCCCGCATGGGCAGCATCTTTTTTTTGATGCCCGGGTGGAATTTTTCTCTGAGGCAAACAA‑GGGTGACGAAAAAGCAGAGGATGAGCCCACGGGCGGTAAAAAAGAATCCCGGACGTAAGCCGTAGCTAGCGGCGAGCAGCCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTttatta < 2:1463807/239‑1 (MQ=255) ttttAAGGGATTTACCCCCTTCCCGCATGTGCGGCATCTCTTTTTTGCTGACCGACTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCCCACTGGCGGTAAAAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTttatta < 2:285853/239‑1 (MQ=255) tttAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATAACGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGGGCAACGCACCACCAACGCCGCCTTTGGAGAGCGTACCCCGCGCCCAGCCGCCTttatta > 1:212980/1‑238 (MQ=255) ttAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTAcg < 1:1133040/239‑1 (MQ=255) ttAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTAcg < 1:982134/239‑1 (MQ=255) ttAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAACCGGAGCTATCGGCGAGCAGGCCGCCCGCCATTGGGGCGAGCAACGCACCCCTAACGCCGCCCGGGGGGAGCGTACCCACCGCCCAGCCGCTTTTATTAc > 1:166873/1‑238 (MQ=255) ttAAGGGATGTCCCCACTTCCCGCATGTGCAGCATCTTTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTAcg < 2:1425374/239‑1 (MQ=255) aggggtGTCAACACTGCCGGATTGGGAAGCATCTTTTTTTTGCTCCCGGGTGGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAGGATGAGTATGGGCACCCTGGGGATAAAAAAGAATCCGGGGTGTAAGCCTTAGCTTTCGGGGAGCAGGCGGCCAGCCATTGGGCCGAGCAACGCACCACTACCGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCgg < 2:1324761/234‑1 (MQ=255) ggaggTCCCCCCTTCCCGCATGTCCGATATCTCTTTTTGGCGGACTGGCTGTAATTTTTCTCTGATGCAAAACA‑GGGGGACGAAAAAGGAGAGTATGACCCCCCTGGCGGTAAAAATGAACCCCGGACGAAGGCCTTAGCTTTCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCGCCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCgg < 2:140150/233‑1 (MQ=255) gATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGt > 1:265941/1‑237 (MQ=255) gATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCCGGGGAGAGCGTACCCCGCGCCCCGCCGCTTTTATTAAGCGGt > 1:579086/1‑237 (MQ=255) gATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAAAAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTAc < 2:1721087/239‑1 (MQ=255) cggctacccGTATGTGCGACATCTCTTTTTTGATGACCGGCGGGAATTTTTCTCTGAGGAAAAACA‑GGGGGAAGAAAAAGCAGAGTACGAGCAATCGGGCGGTAATAAAGATAACCGGACGTAAGCGGTGGATATCGGCGAGCAGGCCGCCAGCCATTGGGCCGGGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTtgtgtg < 2:1571478/233‑1 (MQ=255) ccacTTCCCGCATGTGCAGCTCCTTTTTTTTGCTGACGGGCTGGATTTTTTCTCTGATGCAAAACG‑GGGGGACAAAAAAGCAGGTAATGACCACCCGGGCGGTAAAAAAGAACCCCGGACGAAAGCCGTAGCTATCGGCGAGCAGGCCCCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTtgtgtg < 2:1098387/239‑1 (MQ=255) cacTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGcc < 1:343813/162‑1 (MQ=255) tCCCGCATGGGAGACATTTTTTTTTTGCTGCCGGGCTGAAATTTTTTTCTGATGAAAAACA‑GGGTGCGGAAAAAGCAGAGTATGAGCACCCGGGCGGAAATAAAGAATCCCGAGCGAAAGCCGTAGTTATCGGGGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGAt < 2:1760380/239‑1 (MQ=255) ccccGCATGGGCAGCCTCTCTTTTTGGCAAACCGGTGGGAATTTTTTCCGGAGCAAAAACG‑GGGTAACAAAAAGGCAGAGTTGAAGCCCATGGGCGTTAATAAAGAAGCCCGAAGGTAAGCCTTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGAt < 2:212980/238‑1 (MQ=255) cctcttgtgCAGCATCTCTTTTTTGTTGACCGGGTGGAATTTTTCTCGGATGAAAAACA‑GGGTGACGAAAAAGCAGAGTAGGGGCACACGGGCGGTAATAAAGAATCCCGGACGTAGGCCGTGGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATaa < 2:1666901/234‑1 (MQ=255) ccattgtcCAGCATTTTTTTTTTGCGGACCGGTTGGAATTTTTCTTTGATGAAAAACA‑GGGTGACGAAAAGGAAGGGTAAGAGCACACGGGAGGTAATAAAGATAACCGGACGTAAGCCTTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAag < 2:235099/235‑1 (MQ=255) gaTGGGCAGCATTTCTTTTTTGCTGACCGGCTGGAATTTTTCGCTGATG‑AAAACAGGGGTGAGAAAAAGGCAGTGTATGAGCCCACTGCGGGTAATAAAGAATCCCGGACGTAAGCCGTAGCTATCGGCGAGCGGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAagag < 2:431407/238‑1 (MQ=255) aTGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTtgtgtg < 1:210573/228‑1 (MQ=255) tgCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCAATTGGCCGAGCAACGCACCCCTAACGCCCCCCGGGGAGGGCGCAACCCGCGCCCCACCGCCTTTATTACCCGGTACTTTTGGGGGGAGAAAAGCAtt > 2:1224032/1‑239 (MQ=255) cagcaTCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCCGCCATTGGGGCGAGCAAAGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCCGTACTTGTGTGGCGGTAAGAGCATTa > 1:1593588/1‑238 (MQ=255) tctcTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCCGTGGAGAGCGTACCCAGCGCCCCGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGGGTTg > 1:792538/1‑239 (MQ=255) tctcTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAACAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGCTAAGAGCATTAGCGTTg > 1:746668/1‑239 (MQ=255) ttttttGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATCCCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTAcg < 1:1378789/201‑1 (MQ=255) tGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATCCCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATcc < 1:90047/238‑1 (MQ=255) tttCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCaaga < 1:345983/239‑1 (MQ=255) ctctGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGGAAGCCGTAGCTATCGGCGAGGAGGCCGCCAGCCATTGGGGCGAGCAACGCACCACCAACGCCCCCTGGGGAGAGCGTACCCAGCGCCCAGCCGCCTTTATTACGCGGTTCTTGTGGGGGGGTAAAAGCATTAGAGTTTGGGACAAATCCCCCAAGATACCCaagaaa > 2:577802/1‑237 (MQ=255) gCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCa < 1:959017/239‑1 (MQ=255) gCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCa < 1:1042404/239‑1 (MQ=255) aaaaaaa‑GGGTAAAGAAAAAACAGGGTATGAGCACACGGGCGTAAAAAAAAAATCCCGGACGAAAGCCGTAGCTACCGGCGGGCGGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCa < 2:1508736/237‑1 (MQ=255) ggTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCaaaa > 1:1329530/1‑239 (MQ=255) ggTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCaaaa > 1:1508736/1‑239 (MQ=255) ggTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGGGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCaaaa > 1:62859/1‑239 (MQ=255) ggTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGAAGTAAGACGTAGCTATCGGCGAGGAGGGCGCCCGCCACTTGGGCGGGCAACGAACCACCCACGTCGCCCGGGGGAAGGGGAACCAGCGCCCAACCGGCTTTATTACGAGGCACCTGTGTGGCGATAAAAGCCGTAGCGGTGGGGACAAAACCGGCACGGAACCCAAGAAGCGCCCCCAGGGACaaaa > 2:1355078/1‑239 (MQ=255) cGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAAAACCGGACGGAAGCCGTAGCTGTCGGCGAGCAGGCCGCCAGCCATTGGGGCGAGCAACGCCCCCCCAAAGCCGCCCGTGGAGAGCGGACCCAGCGCCCAGCCGCGTTTTTTAAGCGGTACTTTGGTGGCGATAAAAGCAGTATCCGTGTGGTGAAATCCGCCCAGGAACCCCAGAAGCGCCCGCAGGATCAACAACTg > 2:428910/1‑238 (MQ=255) aaaaGCAGAGTATGAGCACACTGGCGGTAATAAAGAATCCCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAg < 1:824739/239‑1 (MQ=255) agagTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCgg < 1:944512/148‑1 (MQ=255) tATGAGCCCACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGt < 1:1784671/193‑1 (MQ=255) acacTGGCGGTAATAAAGAATCCCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAGATATTTTGTGCCAGc < 1:1224032/237‑1 (MQ=255) cacTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGGCGAGCAACGCACCACTAACGCCGCCTGGGGGGAGCGTACCCAGCGCCCCGCCCCCTTTATTAAGCCGGACTTGTGTGGCGGTAAGAACATTAGCGGTGGGGGCAAAACCCCCACGTAAACCAAAAAGCGCCCCCCAGGTCAAAAACCGCCAGAAAATTTTTGccccccc > 2:1738239/1‑233 (MQ=255) acTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGAt < 1:661964/207‑1 (MQ=255) cTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACCGCCAGATATTTTGTGCCAGCCCCa > 1:293067/1‑238 (MQ=255) cTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTAAGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAGATATTTTGTGCCAGccccc > 1:874046/1‑237 (MQ=255) cTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGGGGAGAGCGTACCCCGCGCCCAGCCGCCTTTATTACGCGGTACTTGTGGGGCGATAAGAGCATTAGCGGTGGGGACAAATCCGCCCAGTAACCCAAGAAGAGCCCGCAGGGTCAAAAACCGCCAGATATTTTTTGCCAGCCCCa > 2:80823/1‑238 (MQ=255) cTGGCGGTAATAAAGAATACCCGACGTAAGCCGTAGCTATCGGCGAGCAGGACCCCAGCCAATGGGCCGAGGAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAGATATTTTGTGCCAGCCCCa > 1:532535/1‑238 (MQ=255) tGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAGATATTTTGTGCCAGCCCCATc < 1:1138268/239‑1 (MQ=255) gCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAGATATTTTGTGCCAGCCCCATCa > 1:46058/1‑238 (MQ=255) cGGTAATAAAAAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGGACAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAACCGCTTTTATTACGCGGTACTTTTGGGGGGGTAAGAGCATTAGCGGTGGGGACAAAACCCCCCAAAAAACCAAGAAACGCCCGCAGGAGCAAAAACAGCCAGATATTTTGTGCCAACCCCCTCaaa > 2:537832/1‑238 (MQ=255) aaGAATCCCGGACGTAACCCGTAGCTTGCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAGATATTTTGTGCCAGCCCCATCAACACCATCAc < 1:630313/239‑1 (MQ=255) aGAATACCGGACGTACGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAGATATTTTGTGCCAGCCCCATCAACACCATCACg < 1:697079/239‑1 (MQ=255) tACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGCGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAGATATTTTGTGCCAGCCCCATCAACACCATCACGATg > 2:364411/1‑238 (MQ=255) tACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAGATATTTTGTGCCAGCCCCATCAACACCATCACGATg > 1:488130/1‑238 (MQ=255) tACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAGATATTTTGTGCCAGCCCCATCAACACCATCACGATg > 1:868577/1‑238 (MQ=255) | TGACGTTACCCGCCAGTTCGCGGACATACAGCGTCAGAATGGGGGCAATTGAGCCCGTCGCCACCTGGATGATTAACGTAGTGACAAACAGGCTGAG‑TACCAGTTTCGGGTTTTTAAGTGATGTCACCACTTCCCGCATGTGCAGCATCTCTTTTTTGCTGACCGGCTGGAATTTTTCTCTGATGCAAAACA‑GGGTGACGAAAAAGCAGAGTATGAGCACACTGGCGGTAATAAAGAATACCGGACGTAAGCCGTAGCTATCGGCGAGCAGGCCGCCAGCCATTGGGCCGAGCAACGCACCACTAACGCCGCCTGTGGAGAGCGTACCCAGCGCCCAGCCGCTTTTATTACGCGGTACTTGTGTGGCGATAAGAGCATTAGCGTTGGGGACAAATCCGCCAAGTAACCCAAGAAGCGCCCGCAGGATCAAAAACTGCCAGATATTTTGTGCCAGCCCCATCAACACCATCACGATG > NC_007779/1116308‑1116783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |