New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 3952802 =123 (0.800)4 (0.030) 3/360 NT 2.9% coding (1561/3474 nt) bcsC cellulose biosynthesis protein BcsC
?NC_007779 3953036 = 150 (1.030)coding (1795/3474 nt) bcsC cellulose biosynthesis protein BcsC
Rejected: Frequency below/above cutoff threshold.

GTGGAAGGTGGTTGCTGGCGCAGCATCGCTTCCGCTTCTGCCTCTTTGCCGCTTTCTCGCAGGCGGTTAGCGGTTTCCAGCACCTGATCGCTTTGCAGTCGATTAACCAGCTCCTGAATATTGCTGTTCCACTGCGCACGCGGCAGGCTATTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCGTAAGCGTAAACCTGCTCCGGGTCGTTCGACTTCTGCTGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/3953049‑3952802
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgcgccagCAACCACCTTCCACGCGTATTGACCTCACGCTGGCTGACTGGGCGCAACAACGACGTGATTACACCGCCGCCCGCGCTGCATATCAGAATGTCCTGACGCGGGAGCCAGCTAACGCCGACGCCATTCTTGGTCTGACGGAAGTGGATATTGCTGCCGGTGACAAAGCGGCGGCACGTAGCCAGCTGGCGAAACTGCCCGCTACCGATAACGCCTCGCTGAACACACAGCGGCGCGT  >  NC_007779/3953036‑3953271
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
GTGGAAGGTGGTTGCTGGCGCGGCATCGCTTCCGCTTCTGCCTCTTTGCCGCTTTCGCGCAGGCGGTTAGCGGTTTCCAGCACCTGATCGCTTTGCAGTCGATTAACCTGCTCCTGAATATTGCTGTTCCACTGCGCACGCGGCAGGCTATTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCGTAAGCGTAAACCTGATCCGGGTCGTTCGACTTCTG                                                                                                                                                                                                                                                       <  2:2105945/239‑1
GTGGAAGGTGGTTGCTGGCGCAGCATCGCTTCCGCTTCTGCCTCTTTGCCGCTTTCTCGCAGGCGGTTAGCGGTTTCCAGCACCTGATCGCTTTGCAGTCGATTAACCAGCTCCTGAATATTGCTGTTCCACTGCGCACGCGGCAGGCTATTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCGTAAGCGTAAACCTGCTCCGGGTCGTTCGACTTCTG                                                                                                                                                                                                                                                       <  2:2122269/239‑1
 tgggagggtGTTGGTGGCGCAGCATCGCTTTCGCTGCTGCCTCTTTTCCGCTTTCTCGCAGGCGGTTAGCGGTTTCCAGCACCTGATCGATGTGCAGTCGGTTAACCAGCTCCTGAGTATTGCTGTTCCACTGCGCACGCGGCAGGCTATGGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGGACAGCCCGTAAGCGTAAACCTGCTCCGTGTCGTTCGACTTCTG                                                                                                                                                                                                                                                       <  2:1350145/229‑1
     AGGTGGTTGCTGGCGCAGCATCGCTTCCGCTTCTGCCTCTTTGCCGCTTTCTCGCAGGCGGTTAGCGGTTTCCAGCACCTGATCGCTTTGCAGTCGATTAACCAGCTCCTGAATATTGCTGTTCCACTGCGCACGCGGCAGGCTATTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCGTAAGCGTAAACCTGCTCCGGGTCGTTCGACTTCTGCTGCG                                                                                                                                                                                                                                                  <  1:867867/239‑1
        TGGTTGCTTGCGCGTCGTCGCTTCCGCTTTTGCCTCTTTGCCTCTTTCTCGCCAGCGGTTAGCGGTTTCCCGCACCTGATCGCTTTGCAGTCGATTAACCAGCTCCTGAATATTGCTGTTCCACTGCGCACGCGGCAGGCTATTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCGTAAGCGTAAACCTGCTCCGGGTCGTTCGACTTCTGCTGCG                                                                                                                                                                                                                                                  <  2:1201814/236‑1
                                                        TCGCAGGCGGTTAGCGGTTTCCAGCACCTGATCGCTTTGCAGTCGATTAACCAGCTCCTGAATATTGCTGTTCCACTGCGCACGCGGCAGGCTATTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCGTAAGCGTAAACCTGCTCCGGGTCGTTCGACTTCTGCTGCG                                                                                                                                                                                                                                                  <  1:1138562/188‑1
                                                                                             TGCAGTCGATTAACCAGCTCCTGAATATTGCTGTTCCACTGCGCACGCGGCAGGCTATTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCGTAAGCGTAAACCTGCTCCGGGTCGTTCGACTTCTG                                                                                                                                                                                                                                                       >  1:434190/1‑146
                                                                                             TGCAGTCGATTAACCAGCTCCTGAATATTGCTGTTCCACTGCGCACGCGGCAGGCTATTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCATAAGCGTAAACCTGCTCCGGGTCGTTCGACTTCTG                                                                                                                                                                                                                                                       <  2:434190/146‑1
                                                                                                                                        CACGCGGCAGGCTATTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCGTAAGCGTAAACCTGCTCCGGGTCGTTCGACTTCTGCTGCGCCAGCAACCACCTTCCACGCGTATTGACCTCACGCTGGCTGACTGGGCGCAACAACGACGTGATTACACCGCCGCCCGCGCTGCATATCAGAATGCCCTGACGCGGGAGCCAGCTAACGCCGACCCCATc                                                                                                                >  2:1907890/1‑237
                                                                                                                                        CACGCGGCAGGCTATTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCGTAAGCGTAAACCTGCTCCGGGTCGTTCGACTTCTGCTGCGCCAGCAACCACCTTCCACGCGTATTGACCTCACGCTGGCTGACTGGGCGCAACAACGACGTGATT                                                                                                                                                                                 <  1:477866/173‑1
                                                                                                                                        CACGCGGCAGGCTATTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCGTAAGCGTAAACCTGCTCCGGGTCGTTCGACTTCTGCTGCGCCAGCAACCACCTTCCACGCGTATTGACCTCACGCTGGCTGACTGGGCGCAACAACGACGTGATT                                                                                                                                                                                 >  2:477866/1‑173
                                                                                                                                                      TTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCGTAAGCGTAAACCTGCTCCGGGTCGTTCGACTTCTGCTGCGCCAGCAACCACCTTCCACGCGTATTGACCTCACGCTGGCTGACTGGGCGCAACAACGACGTGATTACACCGCCGCCCGCGCTGCATATCAGAATGTCCTGACGCGGGAGCCAGCTAACGCCGACGCCATTCTTGGTCTGACGGAA                                                                                                 <  1:1907890/239‑1
                                                                                                                                                                                                                                                TGCGCCAGCAACCACCTTCCACGCGTATTGACCTCACGCTGGCTGACTGGGCGCAACAACGACGTGATTACACCGCCGCCCGCGCTGCATATCAGAATGTCCTGACGCGGGAGCCAGCTAACGCCGACGCCATTCTTGGTCTGACGGAAGTGGATATTGCTGCCGGTGACAAAGCGGCGGCACGTAGCCAGCTGGCGAAACTGCCCGCTACCGATAACGCCTCGCTGAACACACAGCG        <  1:838607/238‑1
                                                                                                                                                                                                                                                  CGCCAGCAACCACCTTCCACGCGTATTGACCTCACGCTGGCTGACTGGGCGCAACAACGACGTGATTACACCGCCGCCCGCGCTGCATATCAGAATGTCCTGACGCGGGAGCCAGCTAACGCCGACGCCATTCTTGGTCTGACGGAAGTGGATATTGCTGCCGGGGACAAAGCGGCGGCACGTAGCCAGCTGGCGAAAGTGCCCGCTCCCGATAACGCCCCGCGGAACAacccgcg        >  2:882145/1‑229
                                                                                                                                                                                                                                                     CAGCAACCACCTTCCACGCGTATTGACCTCACGCTGGCTGACTAGGCGCAACAACGACGTGATTACACCGCCGCCCGCGCTGCATATCAGAATGTCCTGACGCGGGAGCCAGCTAACGCCGACGCCATTCTTGGTCTGACGGAAGTGGATATTGCTGCCGGTGACAAAGCGGCGGCACGTAGCCAGCTGGCGAAACTGCCCGCTACCGATAACGCCTCGCTGAACACACAGCGGCGCGT  <  1:413665/239‑1
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
GTGGAAGGTGGTTGCTGGCGCAGCATCGCTTCCGCTTCTGCCTCTTTGCCGCTTTCTCGCAGGCGGTTAGCGGTTTCCAGCACCTGATCGCTTTGCAGTCGATTAACCAGCTCCTGAATATTGCTGTTCCACTGCGCACGCGGCAGGCTATTGATATGCGCCAGCGCCGCTCTGTCCTGGTCATGACCAGAGAGGTACAGCCCGTAAGCGTAAACCTGCTCCGGGTCGTTCGACTTCTGCTGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/3953049‑3952802
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgcgccagCAACCACCTTCCACGCGTATTGACCTCACGCTGGCTGACTGGGCGCAACAACGACGTGATTACACCGCCGCCCGCGCTGCATATCAGAATGTCCTGACGCGGGAGCCAGCTAACGCCGACGCCATTCTTGGTCTGACGGAAGTGGATATTGCTGCCGGTGACAAAGCGGCGGCACGTAGCCAGCTGGCGAAACTGCCCGCTACCGATAACGCCTCGCTGAACACACAGCGGCGCGT  >  NC_007779/3953036‑3953271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.