| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_007779 | 3,261,134 | Δ1,199 bp | 100% | Y75_RS16205–[tdcD] | Y75_RS16205, [tdcD] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_007779 | 3261134 | 3262332 | 1199 | 213 [0] | [0] 213 | Y75_RS16205–[tdcD] | Y75_RS16205,[tdcD] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 3261133 | 0 (0.000) | 196 (1.300) | 88/374 | NT | 100% | intergenic (‑59/‑33) | tdcE/Y75_RS16205 | 2‑ketobutyrate formate‑lyase/pyruvate formate‑lyase/IS5‑like element IS5 family transposase |
| ? | NC_007779 | 3262333 = | 0 (0.000) | pseudogene (1183/1185 nt) | tdcD | propionate kinase | |||||
Only 100 of 213 total aligned reads displayed.
AATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCG > NC_007779/3260902‑3261369 | aaTTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAAGCGCGGACATTAATTTCGTTTTTCCAGTCCGTTCCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcc < 1:1284834‑M1/239‑8 (MQ=255) cGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaat < 2:1641662‑M1/239‑13 (MQ=255) ttCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagca < 1:439‑M1/238‑30 (MQ=255) aTTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcg > 1:1075578‑M1/1‑195 (MQ=255) ttCATCGCCTTCATTCCGTGTATAGTTATGTTGAATAAAATCGCGGTCATTATTTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAATCCACGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATACTCTCTCTACAATACCTCAACTAAATTATGCAAATGCTGCGGGCGCGTTATctttgcctgaatgattggcatccaaagcaatcattttttcttcg < 2:434059‑M1/238‑45 (MQ=255) cGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacgg < 1:99540‑M1/239‑61 (MQ=255) tgtATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcac > 1:665163‑M1/1‑176 (MQ=255) tgtATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacgg < 1:935093‑M1/236‑61 (MQ=255) aGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatg > 1:1450275‑M1/1‑171 (MQ=255) tGTTGAATAAAATCGCGGACATTATTTTCGTTTTTCCAGTCTGTACCTTTAAAGAAAAGCCATGCGTCTGCGTACAGCTTATCGCTGGTATCAATCTCTACCTTCATGAAAAATAATCTCTCTACACTACTTCACCTATATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacac > 2:1919924‑M1/1‑166 (MQ=255) tGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacac > 2:1428982‑M1/1‑166 (MQ=255) tGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagt > 1:1032340‑M1/1‑166 (MQ=255) tGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagt < 2:1032340‑M1/215‑50 (MQ=255) tGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagt < 1:1417273‑M1/215‑50 (MQ=255) tGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaat < 2:1795460‑M1/197‑32 (MQ=255) tGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCACGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccacagcaatcattttttcttcgctcgtcggaataacggcacaaatgacac > 2:132816‑M1/1‑166 (MQ=255) ttGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTATCTTTAAAGCCAAGCCATGCGACGGCGTACAGCTTAGCGGTGGTCTCAATATCTACATTAATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCTTTCActttgcttaattgaatgtcatcaaaagcaatcattttttcttcgttagtcggaataacggcccacatgacacgc > 2:595941‑M1/1‑164 (MQ=255) ttGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgc > 1:1009920‑M1/1‑164 (MQ=255) ttGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgc > 2:1484657‑M1/1‑164 (MQ=255) aaTAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcat > 1:1718270‑M1/1‑161 (MQ=255) aaTAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataa < 2:679282‑M1/218‑58 (MQ=255) aaTAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataa > 1:679282‑M1/1‑161 (MQ=255) tAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattt > 2:1971075‑M1/1‑159 (MQ=255) tAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattt > 1:1132352‑M1/1‑159 (MQ=255) cATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaaca < 1:1344017‑M1/239‑93 (MQ=255) aTTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcg < 1:1484657‑M1/239‑98 (MQ=255) ttCTTTTTTCCAGTCCGTACCTTGAAAGTCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgct < 1:1973479‑M1/239‑100 (MQ=255) tACCTTTAAAGCCAAGCCATGCGTCGACGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaattgcatccaaagcaatcattttttcttcgttagtcggaataacgg < 2:167254‑M1/183‑61 (MQ=255) cTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATGCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgcgcaccacaggagttagagcga < 2:310052‑M1/239‑120 (MQ=255) ttAAAGCCAAGCCATGCGTCGGCGTACAGCTTATAGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagcgcgatt > 2:113085‑M1/1‑118 (MQ=255) tAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgatta > 1:2029225‑M1/1‑117 (MQ=255) tAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgatta > 1:1528125‑M1/1‑117 (MQ=255) aagccaagccATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattatt < 1:1805756‑M1/239‑125 (MQ=255) aagccaagccATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcattagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattatt < 2:205880‑M1/239‑125 (MQ=255) aagccaTGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattt > 2:1447542‑M1/1‑110 (MQ=255) aagccaTGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAAct > 2:207586‑M1/1‑110 (MQ=255) gccaTGCGTCGGCGTACAGCTTATCGCCGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatt > 1:1166517‑M1/1‑108 (MQ=255) gCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatc > 1:1407230‑M1/1‑97 (MQ=255) gTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctct < 1:1059641‑M1/238‑144 (MQ=255) aTCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaata < 2:1176880‑M1/239‑154 (MQ=255) aTCGCTGGAATTAATATCTACCTTCATGATACATAATCTCTCTACAATACTTCAAATAAATTATGCAATTTCTGCGTGCGAGTTAActatgcttaaatgactgacatccaaagcaatcattttttcttcgttagtcagaataaaggcacaaatgacacgcacattttcaccggaaacaattcgctcaccacaggagttagagcgattattcatttcagcatcaatctctaagccgaata > 2:1245902‑M1/1‑86 (MQ=255) gTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaa > 1:1701291‑M1/1‑79 (MQ=255) gTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctct < 2:509922‑M1/222‑144 (MQ=255) gTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatca < 2:2035810‑M1/216‑138 (MQ=255) gTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccac < 2:141214‑M1/184‑106 (MQ=255) gTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgatcaccacaggagttagagcgattattcatttctgtatca > 2:1454644‑M1/1‑79 (MQ=255) aTCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaa < 1:123965‑M1/238‑162 (MQ=255) aTCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaa < 2:1778672‑M1/238‑162 (MQ=255) cTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatg > 1:2094734‑M1/1‑69 (MQ=255) cTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcac < 2:369487‑M1/153‑85 (MQ=255) tACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgatcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatg > 2:528646‑M1/1‑68 (MQ=255) ccTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaag < 1:12335‑M1/212‑147 (MQ=255) cATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagac > 1:174700‑M1/1‑62 (MQ=255) aTGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaatcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacg < 2:1144325‑M1/239‑179 (MQ=255) tGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacg > 2:1282168‑M1/1‑60 (MQ=255) aataatCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaat > 1:452131‑M1/1‑55 (MQ=255) atCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaa > 1:1880547‑M1/1‑51 (MQ=255) tctACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttga > 1:1787161‑M1/1‑46 (MQ=255) ctACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcg < 1:602985‑M1/89‑45 (MQ=255) aCAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaatt < 2:1536900‑M1/239‑197 (MQ=255) tACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatccttttttcttcgttagtcggaataacggcacacatgacacgcgccttttcactggaaacaattcgctcaccacaggagtta > 2:1606469‑M1/1‑39 (MQ=255) tACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagtta < 1:1606469‑M1/152‑114 (MQ=255) tACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccac > 2:815825‑M1/1‑39 (MQ=255) ttCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttccctggaaacaattcgctcaccac < 2:272596‑M1/141‑106 (MQ=255) ttCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaataccgccaaatgttccatgaccagacgacgaattacgcttgacttctctcct > 2:942818‑M1/1‑36 (MQ=255) ttCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcct > 2:1233726‑M1/1‑36 (MQ=255) ttCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccac > 1:2061964‑M1/1‑36 (MQ=255) ttCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccac > 1:272596‑M1/1‑36 (MQ=255) ttCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgct < 2:760394‑M1/135‑100 (MQ=255) ttCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgct > 1:760394‑M1/1‑36 (MQ=255) cgactAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctct > 1:1447166‑M1/3‑34 (MQ=255) cAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctat > 2:608450‑M1/1‑34 (MQ=255) cAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctat > 1:1323885‑M1/1‑34 (MQ=255) cAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagac > 2:331697‑M1/1‑34 (MQ=255) aCTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcga < 1:5722‑M1/151‑120 (MQ=255) cTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatca < 2:1992470‑M1/168‑138 (MQ=255) tAAATTATGCAAATTCGGCGGGTGCGTTAAcgttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccg < 2:1323885‑M1/239‑210 (MQ=255) tAAATTAGTCAACTTCGTCGGACGCGTTAAatttgcctaaatgaatggcatccaaagcaatcattttttcttcgtaagtcggaatatcggcacaaatgacacccgtattttcactgtaagcaattcgctcaccacatgatttagagcgattattcatttctgtatcaatatctaagcctaatacagccaaatgttcctggaccagacgacgaattaagcttgaattctctcctattccg < 2:1809231‑M1/239‑210 (MQ=255) aaaTTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacagtagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgc < 2:452131‑M1/239‑211 (MQ=255) aTTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccg < 1:2037631‑M1/239‑213 (MQ=255) aTTATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccg < 1:1261678‑M1/239‑213 (MQ=255) ttATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgaca < 1:199862‑M1/97‑72 (MQ=255) tATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccggt < 1:973910‑M1/239‑215 (MQ=255) tATGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccggt < 1:1652057‑M1/239‑215 (MQ=255) tGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccggtga > 1:1809231‑M1/1‑23 (MQ=255) tGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcgg < 2:952442‑M1/75‑53 (MQ=255) tGCAAATTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcgg > 1:952442‑M1/1‑23 (MQ=255) aaaTTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccggtgaata < 2:1073466‑M1/239‑220 (MQ=255) aTTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccggtgaatata > 1:482123‑M1/1‑18 (MQ=255) aTTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccggtgaatata > 1:304398‑M1/1‑18 (MQ=255) aTTCTGCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccggtgaatata > 1:52152‑M1/1‑18 (MQ=255) gCGGGCGCGTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctct < 2:1999266‑M1/156‑144 (MQ=255) cGGGCGCGTTAActttgcctaaatgaagggcatccaaagcaatcattttttcttcgttagtcggattaacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatatctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagattgaaatctctcctattccgccgttgaatataattcca > 2:1523692‑M1/1‑12 (MQ=255) cgTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcga > 1:1562103‑M1/1‑6 (MQ=255) gTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctttatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccggtgaatataattccatccagg < 2:1701291‑M1/238‑234 (MQ=255) gTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccggtgaatataattccatccagg < 1:1842076‑M1/238‑234 (MQ=255) gTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccggtgaatataattccatccagg < 2:1880547‑M1/238‑234 (MQ=255) gTTAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagctggaattctctcctattccgccggtgaatataattccatccagg < 2:1718270‑M1/238‑234 (MQ=255) tAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccggtgaatataattccatccaggcga < 1:346138‑M1/239‑237 (MQ=255) tAActttgcctaaatgaatggcatccaaagcaatcattttttcttcgttagtcggaataacggcacaaatgacacgcgcattttcactggaaacaattcgctcaccacaggagttagagcgattattcatttctgtatcaatctctaagcctaatacagccaaatgttccatgaccagacgacgaattaagcttgaattctctcctattccgccggtgaatataattccatccaggcga < 1:1919924‑M1/239‑237 (MQ=255) | AATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAGCCAAGCCATGCGTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCG > NC_007779/3260902‑3261369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |