| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,063,614 | A→C | 13.8% | V195G (GTG→GGG) | cbpA ← | curved DNA‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 1,063,614 | 0 | A | C | 13.8% | 196.2 / 4.2 | 67 | V195G (GTG→GGG) | cbpA | curved DNA‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (47/9); new base C (4/7); total (51/16) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.44e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CACGATTTTCAGTACCGCATACAGATCGCCGGTCTGTTTTTTGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGTACGCTTATGCTCAGTAAGCGTTTCTTCGAGGAATACCGCCACTTCGATTTCAATATCGTGGCC > NC_007779/1063376‑1063849 | cACGATTTTCAGTACCGCATACAGATCGCCGGTCTGTTTTTTGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAACCa < 1:1310241/239‑1 (MQ=255) aCGATTTTCAGTCCCCAATACAGATCGCCGGTCTGTTTTTTGGTCACCAGACCTATGCCTTTAACGCGCGA‑TC‑GTTGCCGGGCATGGCGGCCTGGCGGGATAGTCAGCAAAATCCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCTCCGCTACCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑AAATCAc < 2:14120/239‑1 (MQ=255) aCCGCCTACGTAGCGCCGGTCGGTTGTTTGCTCTACAGACCGTTGCC‑TTAACTGGCAAGTC‑GTTGCCCCGTCTGGCTGCACGGCAGGTTAGACAGCAAATTGCTTTCTTGCAGTGTTGGACCGCGGACTTTAGTACCCAGCGCCGCTTCCCACGCGCTAACCGTGACAACACTTTCCAGAGCCTGGCCGACAATATCAAACAGAGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATc < 2:410500/239‑1 (MQ=255) ccGAATAGAGATCGCCGGTTTGTTTTTTGCTCCCCATAGCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGCTCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAG‑GAATCACCAGCCACAAATCg < 2:278737/239‑1 (MQ=255) cGCATACAGATCGCCGCTCTGCCTTTTTCCAACGAGACTTTTGCCTTTCACGCGCAA‑TC‑GTTCCCCGGCCTGGCAGCCTGACGGGATATTCAGCAAAATGCTTTCTTTCAGTGTTGGCACGGTGACTTGAGCACCTAGCGCCGCTTCCCACGGTCTACCGGGCACCACAATTGCCAGATCCTGGCCGACCCTACCAAACAGCGGATGTGGCGCAACGT‑GAATACACAGCCACAAATca > 2:136440/1‑237 (MQ=255) cATACAGATCGCCGGTCTGTTTTTTGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCa > 1:1156059/1‑239 (MQ=255) cATACAGATCGCCGGTCTGTTTTTTGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCa > 1:722934/1‑239 (MQ=255) cATACAGATCGCCGGTCTGTTTTTTGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCa > 1:85491/1‑239 (MQ=255) aGATCGCCGGTCTGTTTTTTGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGCTGTGGCGCAATAT‑TACTCACCAGCCACAAATCGCCATTTgg > 2:1398162/1‑239 (MQ=255) aTCGCCGGTCTGTTTTTTGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGa > 1:817067/1‑238 (MQ=255) tCTGTTTTTTGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGttt > 1:1852424/1‑239 (MQ=255) tCTGTTTTTTGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGttt > 1:1823324/1‑239 (MQ=255) tCTGTTTTTTGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGttt > 1:1755779/1‑239 (MQ=255) ttttttGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAACCAGCGGATGTGGCGCAATAT‑GAACCCCCAGCAACAAATCGCCATTTGGACCGCCGATTTCg > 2:1432926/1‑238 (MQ=255) ttttttGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCCCCAGCCACAAAACGCCATTTGGACCGCCGTTTTCg > 2:456670/1‑238 (MQ=255) ttttttGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGc < 1:426414/239‑1 (MQ=255) ttGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCg > 1:159996/1‑238 (MQ=255) tGCTCACC‑GGCCTTTTTCTTTAAAGCCCAA‑ACTTTTGCCCGGCCGGGCGGCTTGGGGGGATAGCCAGCAAAATGTTTTTTTCAAGTGTTGGAACGGTGACTTAACCCCCCCGCGCCGCTCCCCACGGGCAACCCGGCCCCACAATTCCCAGTCCCTGCCCGACAATATCAAACAGGGGATGTGGCGAAATAG‑GAACCCCCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGc < 2:1156059/239‑1 (MQ=255) tC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCCCCAGCca < 1:1771267/174‑1 (MQ=255) cTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGAcgcccg > 1:1442782/1‑238 (MQ=255) gATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATc < 1:197864/153‑1 (MQ=255) cAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCtt > 1:652232/1‑231 (MQ=255) aaaaTGCTTTCTTTCAGTGTTGGAACGGTGACTTTAACCCCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGCTGTCTCGCAATAT‑GAATCACCAGCCACAAATCGCAATTTGGa > 2:197864/1‑153 (MQ=255) gcttgcttACACTGATGGTCCGGATACTTGAGCACCCAACGCCGCTTCCCACGGGCTAACCAGCAACACAATTTCCAGATGCTGGCAGACAATATAAAACAGCGGGTGTGGCGCAATAT‑GAAGCCCCAGCCAACAATCGACATATGGACCGCCGTTTTCGCCCGGCGTCCACTGGCCTTTCAGACGGCTGCGTTGGCCAGTGACGATGCCCGCCGGGATCGTCACGTTCAGCGTTTTCg > 2:1090693/1‑239 (MQ=255) gCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCg > 1:634137/1‑239 (MQ=255) tctttcAGTGTTGGAACGGTGACTTTAGCACCCAGTGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCCGACGGATGCGTTGACCATTGCCGACGCCCGCCCGGCTCGTCACATCCAGCGTTTTCGAAAt > 2:442819/1‑239 (MQ=255) gtgtTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGt > 1:1272427/1‑239 (MQ=255) tgtTGGAACGGGGACTTTAGCCCCCAGCGCCGCTTCCCACGGGCGAACCGGCACCCCAATTTCCAGATCCTGCCCGACAATATCAAACAGCGGATGTGGCGCAAGAT‑GAATCACCAGCCACAAAGCGCCATTTGGAccg < 1:936194/139‑1 (MQ=255) ggAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGa > 1:1019426/1‑238 (MQ=255) gggACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGcc > 1:1955947/3‑239 (MQ=255) gTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCCCAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGc < 1:1600840/144‑1 (MQ=255) gTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGc > 2:1600840/1‑144 (MQ=255) gTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTgg > 1:1718724/1‑153 (MQ=255) gTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCgg > 1:762842/1‑218 (MQ=255) gTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCg > 1:379980/1‑217 (MQ=255) gTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGcc > 1:1204614/1‑239 (MQ=255) gTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGcc > 1:775611/1‑239 (MQ=255) gTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGCTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGcc > 2:897702/1‑239 (MQ=255) gctttaagaccccGGCCCCGCTTCCCACGGGCTACCCGGCACCAAAATTCCCAGACCCGGCCCAACAATATCAAACAGGGGATGTGGCGCAATAT‑AAATCCCCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCaa < 1:1849863/229‑1 (MQ=255) gACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCaa > 1:1542007/1‑239 (MQ=255) ttttACCCCCCAGCGCCGTTTCCCAGGGGCAACCCGGCACCACAATTCCCAGATCCGGGCCGACAATATAAAACAGGGGATGTGGCGCAATAT‑GAATCCCCAGCCACAAATCGCCTTTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAg < 1:51202/238‑1 (MQ=255) aGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCgg > 2:1241175/1‑128 (MQ=255) aGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCgg < 1:1241175/128‑1 (MQ=255) aGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGcc > 1:243345/1‑224 (MQ=255) aGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATaaa > 1:294337/1‑238 (MQ=255) cgccgcTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCg > 1:492597/1‑239 (MQ=255) cgccccTTCCCACGGGCAAACCGGCACCACAATTTCCAGATCCTGCCCGACACTATCAAACAACGCATGCGGCGCAATAT‑GAATCACCAACCACAAATCGCCATTTGAACCGCCGTTTTCGCCCTGCCTCGCCTGGCCTTTCAGACGGCTGCGTCGACCATCACCGACGCCAGCCGGGACCTTCACATTCAGCGTTTTCGGAATTTCCCAATCGATCATGCAAGAGGTGGAATAAAGCg > 2:1621287/1‑239 (MQ=255) ttCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCATGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGt > 1:181372/1‑239 (MQ=255) cggacccccaATTTCCCGGTCCGGGCCCAAAATATCAAACAGCGGGTGGGGGCGAATATAGCACCCCCAGCCACAACGCGCATTTTGGCCCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGTa < 2:294337/231‑1 (MQ=255) accacAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGAAGGTACGCtt > 1:1212838/1‑239 (MQ=255) ccaATTTCCAGACCCGGCCCGAAAATATAAAACAGGGGAGGGGGCGCATTAT‑GAATCCCCAGCCAAAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGTACGCTTATg < 1:456670/238‑1 (MQ=255) aGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGCTCTTCACATTCAGCGCTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGTACGCTTATTCTCAGTaa > 2:308973/1‑238 (MQ=255) aGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTcaca > 1:845578/1‑150 (MQ=255) ggCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGTACGCTTATGCTCAGTAAGCGTttct > 1:1587550/1‑239 (MQ=255) ggCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGTACGCTTATGCTCAGTAAGCGTttct > 1:1660580/1‑239 (MQ=255) ccGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGTACGCTTATGCTCAGTAAGCGTttcttc > 1:569812/1‑239 (MQ=255) cAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGACCGCTTATGCTCAGTAAGCGTTTCTTCGAgg > 2:1462809/1‑239 (MQ=255) aaTATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGa > 1:356055/1‑164 (MQ=255) cGGATGTGGCGCAATAT‑GAATCCCCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGTACGCTTATGCTCAGTAAGCg < 1:208491/215‑1 (MQ=255) cGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCg > 1:1331727/1‑137 (MQ=255) cGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATaaa > 1:218434/1‑173 (MQ=255) cGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGTACGCTTATGCTCAGTAAGCg > 2:208491/1‑215 (MQ=255) gATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACgg > 2:1757137/1‑83 (MQ=255) gATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACgg < 1:1757137/83‑1 (MQ=255) gATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGTACGCTTATGCTCAGTAAGCGTttct > 1:1668796/1‑218 (MQ=255) aaTCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGTACGCTTATGCTCAGTAAGCGTTTCTTCGAGGAATACCGCCACTTCGATTTCAATATCGTgg > 1:2057648/1‑238 (MQ=255) aTCACCAGCCACAAATCGCCATTTTGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAGACCGGCAGGTTATAGCTGATTGTCCGCTTATGCTCAGTAAGCGTTTCTTCGAGGAATACCGCCACTTCGATTTCAATATCGTGAcc > 1:625505/1‑239 (MQ=255) aTCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCTGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATCGCTGATGGTACGCTTATGCTCAGTAAGCGTTTCTTCGAGGAATACCGCCACTTCGATTTCAATATCGTggac > 2:157137/1‑237 (MQ=255) | CACGATTTTCAGTACCGCATACAGATCGCCGGTCTGTTTTTTGCTCACCAGACCTTTGCCTTTAACGCGCAA‑TC‑GTTGCCCGGCCTGGCTGCCTGGCGGGATAGTCAGCAAAATGCTTTCTTTCAGTGTTGGAACGGTGACTTTAGCACCCAGCGCCGCTTCCCACGGGCTAACCGGCACCACAATTTCCAGATCCTGGCCGACAATATCAAACAGCGGATGTGGCGCAATAT‑GAATCACCAGCCACAAATCGCCATTTGGACCGCCGTTTTCGCCCGGCGTCCCCTGGCCTTTCAGACGGATGCGTTGACCATTGCCGACGCCCGCCGGGATCTTCACATTCAGCGTTTTCGGAATTTCCTGTTCGATCATGCCAAAGGCGTTATAAACCGGCAGGTTATAGCTGATGGTACGCTTATGCTCAGTAAGCGTTTCTTCGAGGAATACCGCCACTTCGATTTCAATATCGTGGCC > NC_007779/1063376‑1063849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |