BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	1,239,439	A→C	10.3%	T98P (ACC→CCC)	Y75_RS06220 →	D‑amino acid dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	1,239,439	0	A	C	10.3%	305.1 / 2.6	118	T98P (ACC→CCC)	Y75_RS06220	D‑amino acid dehydrogenase
Reads supporting (aligned to +/- strand): ref base A (48/53); new base C (2/13); total (50/68)
Fisher's exact test for biased strand distribution p-value = 1.29e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 124 total aligned reads displayed.

TTAAATCAGGCAGGACATGAGGTCACCGTCATTGATCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAGCTGCTGGAATCCAGCCGCCTGGCGGAAGTGGAGCC  >  NC_007779/1239202‑1239677

   aagcgggcgggACATGTGGTCCCCGTGATTTGTCGGGGGCGGGGGGCCG‑CCCTGGAAACCGGTGC‑CGCGAATGCCGGGCAATTCTCCCCCGGATATGCTGCACCGGGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATTT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTGCGTACCTGCGAACCCAg                                                                                                                                                                                                                                              <  2:1190887/234‑1 (MQ=255)

   aaTCAGGCAGGACATGAGGTCACCGTCATTGATCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAg                                                                                                                                                                                                                                              <  1:1087108/239‑1 (MQ=255)

    aTCAGGCAGGACATGAGGTCACCGTCATTGATCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGc                                                                                                                                                                                                                                             <  1:1626057/239‑1 (MQ=255)

         gcaggACATGAGGTCACCGTCATTGATCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCCACGGTACGCAGTTTCAGTTGAAATGGATTGGGCAAATGTTTCGTAACTGCGacacaaccccct                                                                                                                                                                                                                                         >  2:1433984/1‑230 (MQ=255)

          caggACATGAGGTCACCGTCATTGATCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACt                                                                                                                                                                                                                                         <  1:843488/237‑1 (MQ=255)

             gACATGAGGTCACCGTCATTGAGCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACAcc                                                                                                                                                                                                                                                <  1:1460291/227‑1 (MQ=255)

               cATGAGGTCACCGTCATTGATCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGa                                                                                                                                                                                                                                  <  1:1509899/239‑1 (MQ=255)

                      gcACCGTAATTGACCGGGGGCCGGGGGCCG‑CCCGGGAAACCAGTGC‑GGCGAATGCCGGGCAAATCTCCCCCGGTTATGCTGCGCGGGGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATAAAAT‑GGATGT‑TCCGGCGCC‑AGGCGCGGCGGGGGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATTTGGAAAAGGTTCGGTACCTGCGACCCCAGCCACTACATGGAAAACaa                                                                                                                                                                                                                            <  2:721283/237‑1 (MQ=255)

                        aCCGTCATTGATCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCGGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAgg                                                                                                                                                                                                                         <  1:341454/239‑1 (MQ=255)

                        aCCGTCATTGATCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGGGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAgg                                                                                                                                                                                                                         <  1:1269231/239‑1 (MQ=255)

                             cATTGATCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCgg                                                                                                                                                                                                                     <  1:2013048/238‑1 (MQ=255)

                               ttGATCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATg                                                                                                                                                                                                                  <  1:2100979/239‑1 (MQ=255)

                                 gATCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGGGGTTCCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCACCGTTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGGTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGt                                                                                                                                                                                                                <  1:1181949/239‑1 (MQ=255)

                                    cGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAAAAAAGGGCGGATGGTGCg                                                                                                                                                                                                             >  1:1128609/1‑239 (MQ=255)

                                      ggAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGGTCCAGTTGAAATGGATGTGGGAAATGTTACGTAACTTCGACACCAGCCACTACATGGAAAACCAAGGGCGGATGGcgcg                                                                                                                                                                                                             >  1:1810602/1‑237 (MQ=255)

                                       gAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTc                                                                                                                                                                                                           <  1:555646/238‑1 (MQ=255)

                                          ccGGGGGAGC‑CCCTGGAAA‑CAGGGCGCGCAAATGCCGTGAAAAGCTCCCCCGTATATGCTGCACCGGGGGCGGCACCGGGGGTCCTTTAAAAAGGG‑ATTAAAT‑GGATGT‑TCCGGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTGGACGGTACGCAGTTCAAGTTGAAATGGATGTGGCAAATTTTACGTACCGGCGCCACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑gg                                                                                                                                                                                                       <  2:1495275/238‑1 (MQ=255)

                                           ccggggCCGCCCCTGGAAACCGGGGC‑CGCGAATGCCGGGAAAATCTCCCCCGGATGTTCTGCCCCGGGGGCGGCACGAGGTGTGCCTTTAAAGGCG‑ATTAAAT‑GGATGT‑GCCGGCGCC‑ATGGGCCGCGGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGGGGAAAGTGTTACGTAACGGCGACCCCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑gg                                                                                                                                                                                                       <  2:881609/236‑1 (MQ=255)

                                           cGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGTT‑TCGTCTCGACGGTACGCATTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑gg                                                                                                                                                                                                       <  1:245534/237‑1 (MQ=255)

                                           cGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCg                                                                                                                                                                                                     <  1:1364952/239‑1 (MQ=255)

                                                            aaCCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGAt                                                                                                                                                                                      <  1:1464167/238‑1 (MQ=255)

                                                                          aaTGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAAAACAGCCGGGATTGCCTGAAAGCAtt                                                                                                                                                                        >  1:976460/1‑239 (MQ=255)

                                                                                   aaaaaCTCCCCCTGATATAATGCACTGTGGGCGTCGCCGGGTGTGCCTATAAAAGCG‑‑TTAAAG‑TGATTTCCCCGGCGCA‑TGGCGCGGCTGGCGGT‑CCTTCGCGACGTTGAGCATCTCCAGTTTAAATTGATGTGTAAAATGGTCCTAAACTGCGACCCCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGa                                                                                                                                                               <  2:1490527/238‑1 (MQ=255)

                                                                                    aaaTCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGa                                                                                                                                                               <  1:687987/238‑1 (MQ=255)

                                                                                    aaaTCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGa                                                                                                                                                               <  1:605646/238‑1 (MQ=255)

                                                                                       tctcCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAAcc                                                                                                                                                           >  1:1654039/1‑239 (MQ=255)

                                                                                        ctcCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGGGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGGCGGTACGCAGTTCCAGTTGAAATGGATTTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑a                                                                                                                                                         <  1:972658/239‑1 (MQ=255)

                                                                                              ggagtgagcagcACTGTGGGCGGC‑CCCGGTGGGGCGTTTAAAGGC‑AGTAAATGGGATTT‑CCCAGCGCC‑TGGGGCCGGTGGCGGT‑CGGGCTGGAGGGTACGCAGTTCCAGTTGAAAGGGATGGGAAAAGTGTTACGTATCGGCGACCCCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATGCAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTc                                                                                                                                                   <  2:1498860/229‑1 (MQ=255)

                                                                                                       tgcACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGAt                                                                                                                                                                                      >  1:374183/1‑196 (MQ=255)

                                                                                                         cACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACaa                                                                                                                                                                                                                            <  1:1542049/157‑1 (MQ=255)

                                                                                                         cACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCg                                                                                                                                                                                                     <  1:205823/179‑1 (MQ=255)

                                                                                                         cACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGGTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCg                                                                                                                                                                                                     >  2:205823/1‑179 (MQ=255)

                                                                                                          aCCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGAAGGGACGCAGTTCCAGTTGAAATGGATGTGGCCAATGTTATGTCACTGCGACCCCAGGCACTACATGGGAATCAAAAGGTGGGTGG‑GCGGCTGGGCGGAATACAACCGATGTTGCACGAAAACATAGCGTGCCGACACC‑AATATCTAGCATGAAGGGc                                                                                                                                       >  2:992091/1‑239 (MQ=255)

                                                                                                              tGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTTCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACCTGGAAAACAAAGGGCGGATGGTGCGGCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTa                                                                                                                                               >  1:996746/1‑227 (MQ=255)

                                                                                                                     gaCCTGGTGTGTCTTTAAAAGCA‑ATAGAAT‑GGAGGT‑GACGGCGCC‑GTGGGCGGCGGGCGGT‑GCGTCTCGACGGTACGCAGTTCCAGTTGAAAGGGATGGGGCAAAGGTTACGTAACTGCGACCCCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTgg                                                                                                                             <  2:1862595/237‑1 (MQ=255)

                                                                                                                     cACCAGGTGTGCCTTTAAAAGCG‑ATTAAAG‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTgg                                                                                                                             <  1:1719609/238‑1 (MQ=255)

                                                                                                                       tagagaacagcTTTAAAAGGGTATTAGTG‑GGATGT‑TCCATCGAC‑TTCGGCGGCGGGGGTT‑TCGTCGCAGTGTTACGCATTCCCGGTTGAAGGGGGTGTGAAAAGTGTAAAGGAGCTGCCTCCCCAGCCACTACATGGAAAACAAAGGGCGGTGGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGGAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGa                                                                                                                           <  2:375286/229‑1 (MQ=255)

                                                                                                                        cAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTTTCGACGGTAAGCAGTTCCAGTTGAAATGGATGTGGGAAATGTTACGTAACTGCGAAACCAGCCACTACATg                                                                                                                                                                                                                                    >  1:1683917/1‑134 (MQ=255)

                                                                                                                          ggTGTGTCTTAAAGGGCG‑CTTAAAT‑GGATCT‑TGCGGGGCC‑ATCGGTCGGTGGCGGG‑TCGCATAGCCGGTACGCAGTGCGGGTTGAAATGAGTGTGGCACATGTGACGTAAGGGCGTCACCAGCCACTACATGGAAAACAAAGGGCGCGTGGTGCGTCT‑GGCGGAATAAAGCCATGATTGCCTGAAAGCAGTGCGCGCCGAATCC‑AATATTCCCTATGAAGGGCGAAAGGGTGGGACGc                                                                                                                        <  2:1810602/238‑1 (MQ=255)

                                                                                                                          ggTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGAc                                                                                                                          >  1:2003079/1‑236 (MQ=255)

                                                                                                                           gtgtGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCt                                                                                                                       >  1:1910834/1‑238 (MQ=255)

                                                                                                                            tgggCCTTGAAAAGCG‑ATTAAAG‑GTATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGAGGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATAGTCAGTATGAAGGGCGTCAGGGTGGGACGc                                                                                                                        <  1:895622/233‑1 (MQ=255)

                                                                                                                              tgCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCa                                                                                                                    >  1:794282/1‑238 (MQ=255)

                                                                                                                               gcttttAAAGGGG‑ATAAAAT‑GGATGT‑TCCAGCGCC‑AGGCGCCGCTGGCGGT‑TCGTCCCGACGGTCCGCAGTTCCAGTTGAAATGGATGGGGAAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCaa                                                                                                                   <  2:1420552/235‑1 (MQ=255)

                                                                                                                               gcgtgtAAAAGCG‑ATTAAAG‑GTAGAT‑CCCAGCGCG‑AGGCG‑CGCCTGCGGTGTCGTTTCGACGGTTCGCAGTTCCATTTGAAATGAGGGTGGCAACTGGTGCGTACCTGCGATGCCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCaa                                                                                                                   <  2:976460/233‑1 (MQ=255)

                                                                                                                               gCCTTTAAAGGCG‑ATT‑AAT‑GGGGTT‑TCCCGCGCCGATGCGCGGGGGGCGGT‑GCGTCTGCACGGGGCGCAGGTCCAGTTGAAAGGGGGGGGGCAAATTTTGCTAACCTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCaa                                                                                                                   <  2:1096732/238‑1 (MQ=255)

                                                                                                                               gCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCg                                                                                                                                                                                                     >  2:750574/1‑157 (MQ=255)

                                                                                                                               gCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCa                                                                                                                    >  1:1690327/1‑237 (MQ=255)

                                                                                                                               gCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGGCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGGCACTACATGGAAAACAAAGGGCGGATGGTGGGTCT‑GGCGGCAAACAGCCGTTATTGCCCGAAAGCATTTGGCGCCGAAGCC‑AATATTCGGGTTGAAAGGCGTACGGGGGGGACGGTGCac                                                                                                                   >  2:1378510/1‑237 (MQ=255)

                                                                                                                                 cTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGGGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGt                                                                                                                                     <  1:782145/218‑1 (MQ=255)

                                                                                                                                        aGCG‑ATTAAGG‑GGATGT‑TCCGGGGCC‑GTGCGCGGCTGGCGGT‑TTGTCTCGGCGGTACGCAGTTCCGGTTGAAAGGTGTGTGGAAAAGGTTATGTAACTGCCACCCCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTa                                                                                                         <  2:741228/239‑1 (MQ=255)

                                                                                                                                        aGCG‑ATTAAAT‑GGATGT‑GCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTa                                                                                                         <  1:2023114/239‑1 (MQ=255)

                                                                                                                                           g‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCCAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACt                                                                                                                 >  1:375286/1‑228 (MQ=255)

                                                                                                                                           g‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCCACGGTACGCAGTTCCAGGTGAAATGGAATTGGCAAATGTTACGTAACTGCGACAACAGCCACTACATGGAAAACAAAGGGCGGAAGGGGCGGCC‑GGCGGAATACAGCCGGGCGTGCCTGAAAGCAATGCGCGCCGACAGC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGAAGCTGCAACCGGTCCGTACCg                                                                                                      >  2:2023114/1‑239 (MQ=255)

                                                                                                                                             aTTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGacac                                                                                                                                                                                                                                                 <  1:1988101/101‑1 (MQ=255)

                                                                                                                                             aTTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAggg                                                                                                                                                                                                                        <  1:195694/126‑1 (MQ=255)

                                                                                                                                             aTTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAggg                                                                                                                                                                                                                        >  2:195694/1‑126 (MQ=255)

                                                                                                                                             aTTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGAAGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTTCGTAACTGCGacac                                                                                                                                                                                                                                                 >  2:1988101/1‑101 (MQ=255)

                                                                                                                                              ttAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCCGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGAAACCAGCCACTACATGGAAAACAAAGGGCGGATGGAGCGTCT‑GGCGGAACACAGCCGTGATTGCCTGAAAGCATTGCGCGACGAAACC‑AATAtt                                                                                                                                                    >  2:385755/1‑191 (MQ=255)

                                                                                                                                              ttAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTa                                                                                                                                                                                                                                        >  1:1359684/1‑109 (MQ=255)

                                                                                                                                              ttAAAT‑GGATGT‑CCCAGCGCC‑AGGCGCGGTTGGCGGT‑TCTTCTCGACGGTACGCGGTTCCAGTTGAAATGGATTGGGAAAATGTTACGTACCTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGAt                                                                                                                                                                                      <  2:1427725/158‑1 (MQ=255)

                                                                                                                                               tAAAT‑GTATGT‑TCCACCCCC‑ATGCGCCGCTGGCTGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGTCAAATTTTACGTACCTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGaac                                                                                                   <  1:270194/239‑1 (MQ=255)

                                                                                                                                                   aagggagtatCCAGAGCC‑ATGCGCGGCTGCCGGT‑TCGTCTAGACGGTACGCAGTTCCAGTGAAAAGGGATGTGGAAAAGGTTAGGTAAGTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGaacaa                                                                                                 <  1:1965745/230‑1 (MQ=255)

                                                                                                                                                         gT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAg                                                                                                                                                                            >  1:1427725/1‑158 (MQ=255)

                                                                                                                                                            tCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGAt                                                                                                                                                                                      <  1:1076116/146‑1 (MQ=255)

                                                                                                                                                            tCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACGGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAggg                                                                                                                                <  1:1552361/199‑1 (MQ=255)

                                                                                                                                                                       tGCGCCGCTGGCGGT‑TCGTCTCGTCGGTACGCAGTTCCAGTTGAAATGGGTGGGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAAACAAGGGCGGGTGGGGCGTCT‑GGCGGAATACAGCCGTGATTGCACGAAAGGATTGCGGCCCGCAACCAAATATT‑AGGCAGAATGGCCTCAGGGTGGGGCACTGCACCAGTTCCGTACCGAACAACAGATTGAAAATGCgcac                                                                               >  2:1721415/1‑235 (MQ=255)

                                                                                                                                                                       tGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGAccc                                                                              >  1:267502/1‑239 (MQ=255)

                                                                                                                                                                       tGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGAccc                                                                              >  1:1804371/1‑239 (MQ=255)

                                                                                                                                                                              cTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGGAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACa                                                                                                                                                                                                                             >  2:433726/1‑91 (MQ=255)

                                                                                                                                                                              cTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACa                                                                                                                                                                                                                             <  1:433726/91‑1 (MQ=255)

                                                                                                                                                                              cTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGata                                                                        >  1:94734/1‑238 (MQ=255)

                                                                                                                                                                                   ggT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACTTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGcc                                                                   <  1:1809331/238‑1 (MQ=255)

                                                                                                                                                                                   ggT‑TCGTCCCGCCGGTACGCATTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACCCCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGcc                                                                   <  1:1433984/238‑1 (MQ=255)

                                                                                                                                                                                            tcGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTg                                                                                                                                                                                        >  1:915161/1‑114 (MQ=255)

                                                                                                                                                                                               aCGGTACGCAGTTCAGGTTGAAAGGGAGGGGGCAAATGTTACGTAACGGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGa                                                        <  1:1065880/238‑1 (MQ=255)

                                                                                                                                                                                                     cGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGc                                                 >  1:1006563/1‑239 (MQ=255)

                                                                                                                                                                                                        aGTTCCATTGAAAATGGATGTGGCAAATGTTAGGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGt                                               <  1:1084634/238‑1 (MQ=255)

                                                                                                                                                                                                        aGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGaacaa                                                                                                 >  2:839055/1‑188 (MQ=255)

                                                                                                                                                                                                        aGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGaacaa                                                                                                 <  1:839055/188‑1 (MQ=255)

                                                                                                                                                                                                          ttCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGa                                                                                                                                                               <  1:1520331/125‑1 (MQ=255)

                                                                                                                                                                                                          ttCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGc                                                                                                                        >  1:1202227/1‑163 (MQ=255)

                                                                                                                                                                                                          ttCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGc                                                                                                                        <  2:1202227/163‑1 (MQ=255)

                                                                                                                                                                                                          ttCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGGCGTGGAAGAAGCCGGCGGAcc                                            >  2:1033150/1‑239 (MQ=255)

                                                                                                                                                                                                          ttCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCAGTGATTGCCTGAAAGCATTGCGCGCCGa                                                                                                                                                               >  2:1520331/1‑125 (MQ=255)

                                                                                                                                                                                                           tCCAGTTGAAATGGATGTGGAAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTa                                              <  1:1353390/236‑1 (MQ=255)

                                                                                                                                                                                                             cAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTa                                         >  1:878489/1‑239 (MQ=255)

                                                                                                                                                                                                               gTTGAAATGGATGTGGCAAATGTTACGTAACTGCGCCACCAGCCACTACATGGAAAACAAAGGGCGGATGGAGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑CATATTCGGCATGAATGGCGTCAGGGTGGGACGCTGCAACTGTTTCGTACACAACAAAAGTATGAAAACGCCACCCGCGAAATCGCCGCTCTGTAACTTGCCGGAGTAcctcatc                                       >  2:1191076/1‑234 (MQ=255)

                                                                                                                                                                                                                    aaTGGATGTGGCAAATGTTACGTAACTGCGACACCTGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTACCAgctg                                  >  2:428082/1‑239 (MQ=255)

                                                                                                                                                                                                                    aaTGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGa                                                                                                                           >  1:574742/1‑150 (MQ=255)

                                                                                                                                                                                                                          tgtgGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCaa                                                                                                                   >  1:1955954/1‑152 (MQ=255)

                                                                                                                                                                                                                                   tGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAGCTGCTGGAATCCAgccg                    >  2:1777047/1‑238 (MQ=255)

                                                                                                                                                                                                                                       aCGTAACGGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAGCTGCTGGAATCCAGCCGCCTgg               <  1:636509/239‑1 (MQ=255)

                                                                                                                                                                                                                                        cGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAGCTGCTGGAATCCAGCCGCCTGGc              >  1:710581/1‑239 (MQ=255)

                                                                                                                                                                                                                                             cTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAGCTGCTGGAATCCAGCCGCCTGGCGGAAg         >  1:333335/1‑239 (MQ=255)

                                                                                                                                                                                                                                              tGCGCCACCAGCCACTACATGGAAAACCACGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAATGCATTCCGCGCCGAAACC‑AATATTCAGTATGAAGGTCGTCAGTGTGGGACGCTGCACTTGTTCCGTACCGACCAACAGTATGAAACTGCGACCCGCGATATCGCCGTGCTGGAAGATTCAGGCGTACCGTATCAGCTGCTGTCATCCAGCCGCCTGGCGGAAGt        >  2:1520799/1‑239 (MQ=255)

                                                                                                                                                                                                                                                cGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAg                                     >  2:704578/1‑208 (MQ=255)

                                                                                                                                                                                                                                                cGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAg                                     <  1:704578/208‑1 (MQ=255)

                                                                                                                                                                                                                                                 aacacCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAGCTGCTGGAATCCAGCCGCCTGGCGGAAGTgg      <  1:1191076/237‑1 (MQ=255)

                                                                                                                                                                                                                                                    acCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAGCTGCTGGAATCCAGCCGCCTGGCGGAAGTGGAGcc  <  1:507951/239‑1 (MQ=255)

TTAAATCAGGCAGGACATGAGGTCACCGTCATTGATCGGGAGCCGGGGGCCG‑CCCTGGAAACCAGTGC‑CGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCG‑ATTAAAT‑GGATGT‑TCCAGCGCC‑ATGCGCCGCTGGCGGT‑TCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCT‑GGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACC‑AATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAGCTGCTGGAATCCAGCCGCCTGGCGGAAGTGGAGCC  >  NC_007779/1239202‑1239677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`