Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,205,094	G→A	17.1%	intergenic (‑182/‑25)	ttdR ← / → ttdA	DNA‑binding transcriptional activator TtdR/L(+)‑tartrate dehydratase subunit alpha

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,205,094	0	G	A	17.1%	177.7 / 11.5	95	intergenic (‑182/‑25)	ttdR/ttdA	DNA‑binding transcriptional activator TtdR/L(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base G (12/59);  new base A (6/8);  total (25/70)
Fisher's exact test for biased strand distribution p-value = 6.62e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TGAACGATTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTC  >  NC_007779/3204857‑3205332                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                    tgAACGATTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑GAATTTT‑TCAGa                                                                                                                                                                                                                                                    >  1:1254350/1‑239 (MQ=255)    aCGATTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACa                                                                                                                                                                                                                                                  <  1:451198/238‑1 (MQ=255)        tttCTACCAGTTCCTGCAAGTCGTTGGCTAAAGGCCAGCTATTCCGCATCGTTAATTCTCCGCAGTTGTGTTTAGCGAAGTGTATTTCGAAAAACATTGCCATTCCCTGCACTGGCGCAATATTCATCCTTATTTTCGCGTTGATTCACTAACTGTTAATTACGTATTCGCGGTGGGAAAAAATATCAAACCACATCTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTG‑CCAGACAAAT‑Ac                                                                                                                                                                                                                                            <  2:1330412/239‑1 (MQ=255)                  tACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑TAATTTT‑TTTGAAAAAA‑ACAAACACAGGa                                                                                                                                                                                                                                  >  2:1135704/1‑239 (MQ=255)                   aCCTGGAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAAGTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCGCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTgg                                                                                                                                                                                                                                   <  2:911860/237‑1 (MQ=255)                   aCCTGAATGGCTTTGGCTAAAGGCCAGCTAGTCAGCATCGTTAATTATCCGCAGTTGTGGTAAGCGCAGTGTATTTCGCAAAACATGGCCATTCCCTGCTCTGGCGCGATATTCAGTCTTATTTTCGCGTTGATTCACGGACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGGTTGTGGCGGT‑G‑AATTTGT‑CCAGACAAAT‑TCAAAAACTgg                                                                                                                                                                                                                                   <  2:1928725/237‑1 (MQ=255)                            tCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACaaa                                                                                                                                                                                                                                                <  2:2030832/216‑1 (MQ=255)                            tCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AAATTTT‑TCATACaaa                                                                                                                                                                                                                                                >  1:2030832/1‑216 (MQ=255)                                   cttaaGGGCAGCTATTCAGCATCATTAATTCTCCACATGTGTGATAATCGCAGTTTATTTCGCAAAACATTGCCACGCCCTGCCCTGGCCCAACAATCATTCTTAATGTCGCTTTGATTCACGAACTGTTGAATGCATATTCACGGTAGCAAAAAATATAAAACCACATTTTTAGTAGTAGTATGTGGCCGT‑G‑AATTTTT‑CCAGACCAAT‑ACAAAAACTGTAGTTG‑CCacgatgttgga                                                                                                                                                                                                                <  2:1130495/236‑6 (MQ=255)                                   cTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCg                                                                                                                                                                                                                 <  1:649215/238‑1 (MQ=255)                                    tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGTCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGa                                                                                                                                                                                                                <  2:282178/238‑1 (MQ=255)                                    tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGGGCGa                                                                                                                                                                                                                <  2:462953/238‑1 (MQ=255)                                    tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGa                                                                                                                                                                                                                <  2:1338815/238‑1 (MQ=255)                                    tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGa                                                                                                                                                                                                                <  1:1258731/238‑1 (MQ=255)                                    tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGa                                                                                                                                                                                                                <  1:1558025/238‑1 (MQ=255)                                    tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGa                                                                                                                                                                                                                <  1:1923314/238‑1 (MQ=255)                                      aaGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGG‑AATTTTT‑CC‑CAAAAAA‑AAAAAAAATTGAGGTG‑TCATGAAGAGCGGAAg                                                                                                                                                                                                             >  1:1069243/1‑239 (MQ=255)                                       aGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGG‑T‑AATTTTT‑TTAAACAAAA‑ACAAAAAATAGAGGTG‑TCATGATGAGCGAAAgg                                                                                                                                                                                                            >  1:1373723/1‑238 (MQ=255)                                          ccAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGTGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGta                                                                                                                                                                                                           <  1:352405/237‑1 (MQ=255)                                            aGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑TCAGACAAAA‑AAAAAAAAAAGAGTTG‑TCATGATTTGAGGAAGtaataa                                                                                                                                                                                                       >  1:836446/1‑239 (MQ=255)                                            aGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AAATTTT‑TTAGAAAAAT‑AAAAAAAATGGAGTTG‑CCATGATGAGCGGAAGgaataa                                                                                                                                                                                                       >  1:314352/1‑239 (MQ=255)                                                 ttCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAg                                                                                                                                                                                                                                 <  1:1540455/209‑1 (MQ=255)                                                      cATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGG‑G‑AATTTTT‑TCATACAAAA‑AAAAAAAAAAGGGATG‑TCACTATGAGCGGAAGgaataaaaaaaaagca                                                                                                                                                                                             >  1:1948786/1‑229 (MQ=255)                                                         cGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTg                                                                                                                                                                                          <  1:1617468/239‑1 (MQ=255)                                                           ttAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑TCAAAAAAAT‑AAAAAAAAAGGAGTTT‑TCATGATGAGCGGAAGAAATAAAAAAAAAGAAGTGaa                                                                                                                                                                                        >  1:1087580/1‑239 (MQ=255)                                                                tATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGt                                                                                                                                                                                   <  1:206293/239‑1 (MQ=255)                                                                    cGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑TAATTTT‑TCACACAAAA‑AAAAAAAATAGAGTTG‑ACATGATGAGCGGAAGTAATAAACAACAAGCAGTGGAAAAgattag                                                                                                                                                                               >  1:685153/1‑234 (MQ=255)                                                                     gccgtggtgATAAGCGCTGTGTATTTCGCAAAACATTGCCATTGCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACAGTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAATCTGGAGTTG‑CCATGATGCGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACa                                                                                                                                                                              <  2:1491590/233‑1 (MQ=255)                                                                     gCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGC‑AAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACag                                                                                                                                                                             <  1:194369/239‑1 (MQ=255)                                                                       aGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTATTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGc                                                                                                                                                                                              <  1:1621641/221‑1 (MQ=255)                                                                          tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAAGCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTGGACAGAGAt                                                                                                                                                                         <  1:1589681/239‑1 (MQ=255)                                                                               tAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTc                                                                                                                                                                     <  1:1289353/238‑1 (MQ=255)                                                                                 ctcgcCGTGTTTTTCGCAAAACATTGCCTTTCCCTTCTCTGGCGAATTTTTCATTCTTATTTTCGCGTTTATTCGCTAACTTTTATTTACATATTCGCGGTGGCAATAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑A‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGATTTG‑CCATGATGAGCGAATATAATAAGCAACAGGCAGTGAATAAGTTGACAGATGTTGTCgtt                                                                                                                                                                  <  2:1214721/237‑3 (MQ=255)                                                                                 aGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCt                                                                                                                                                                  <  1:544507/239‑1 (MQ=255)                                                                                      aGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑TCAGACAAAA‑AAAAAAAATTGGGGTT‑CCCTGATTAGGGAAAATAATAAAGAACAAGGAGGGAAAAAAGTTACAGAGATTGTAGccgacat                                                                                                                                                             >  1:1214721/1‑233 (MQ=255)                                                                                        tgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAg                                                                                                                                                                                                                                 <  1:358491/170‑1 (MQ=255)                                                                                          tATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑TCAGACAAAT‑AAAAAAAATGGAGTTG‑CCATGATGAGCGAAAATAAAAAACAACAAGCAGGGAATAAATTGAGAGAGATTTTTGCTAACTTTA‑c                                                                                                                                                         >  1:1525075/1‑238 (MQ=255)                                                                                          tATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGta                                                                                                                                                                                                           <  1:911554/189‑1 (MQ=255)                                                                                             ttCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑TTTTACAAAA‑ACAAAAACTAGAGATG‑CCCTGATGAGCGAAAGTAATAAACAACAAGCAGGGAATAAAGTTACAGAGAGTGTCGGTATATTTA‑cacc                                                                                                                                                      >  1:1728890/1‑235 (MQ=255)                                                                                             ttCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑TCCGCCAAAA‑ACAAAAAATTGAGTTG‑CCATGATGAGCGAAAGGAATAAGAAACAAGCAGTGAAAAAGTTGACAGAGAATATCGCTAACTTTA‑CCGc                                                                                                                                                      >  1:1202113/1‑238 (MQ=255)                                                                                              tCGAAAAACTGTGCCATCCCTTTCTTTGCCACAATATTCATTATTATTTACACATTGATTCACAAACTGTTAATTACATATTACCGGTGGAAAAAAAAATAAAACCACATTTTTAGTGGTAGTGTG‑GGGGGG‑G‑AATTTTTCCCAGACAAAA‑AAAAAAAGGGGAGTTG‑CCAGGATGAGCGAAAATAATAAGCAACAGGAAGTAAATAATTTAACAGAAATTGTCGCTAACTTTA‑CCGCCa                                                                                                                                                    <  2:68478/239‑1 (MQ=255)                                                                                               cGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAg                                                                                                                                                                                                                   <  1:579677/176‑1 (MQ=255)                                                                                                  aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AAATTTT‑TTATACCAAA‑AAAAAAAAAGGAGGTG‑TCAGTGTGTGGGAAAGTAATAATAAACAAGAAATCGAAAAATTGAAAAAGATGGTCGCTAAATTTatagacactgt                                                                                                                                                 >  2:77931/1‑229 (MQ=255)                                                                                                    aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AAATTTT‑TCAAACAAAA‑ACAAAAAATTGAGTTT‑GCCTGATGGGGGAAAGTAATAAAAAAAAAGCAGGGAAAAAATTTGCAGAGATTGTTGCTAACTTTA‑TCCCCCAGAttt                                                                                                                                              >  1:68478/1‑239 (MQ=255)                                                                                                           ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCatga                                                                                                                                                                                                                       <  1:2031050/160‑1 (MQ=255)                                                                                                           ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAg                                                                                                                                                                                                             <  1:1235033/170‑1 (MQ=255)                                                                                                            cATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCg                                                                                                                                       <  1:77931/238‑1 (MQ=255)                                                                                                              ttCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAATAAAAAACCACATTTTTAGGGGTAGTTGGTGGCGGT‑G‑AATTTTT‑CCAGAAAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGAAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AAt                                                                                                                                   <  1:893139/239‑1 (MQ=255)                                                                                                                cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGa                                                                                                                                                                                                                                                    >  1:668175/1‑128 (MQ=255)                                                                                                                cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGa                                                                                                                                                                                                                                                    <  2:668175/128‑1 (MQ=255)                                                                                                                    aaaagagacagatatTAATTCTTATTTTCGCGTTAATTCACGAATTTTTAATTACATATTCACGGTGGAAAAAAATATAAAACAACATTTTTAGTGGTAGTTTGGGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACGGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACGGGCAGTGAATAAGTTGACGGGGATTGGCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCtg                                                                                                                              <  1:2022838/227‑1 (MQ=255)                                                                                                                     ctctGGCCAAATATTCATGTTTATTTTCGCTTTGATTCACGACCTTTTAATTACATATTCACGGTGACAAAAAATATAAACCCAAATTTTTAGTGGTAGTTTGTGGCGTT‑G‑ATTTTTT‑CCAAACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATACGCACCAGGCAGTGAATAAGTTGACAGAGTTTGTCGTTAATTTTA‑CCGCCATGATTTCTACCCG‑AATGCCtgat                                                                                                                            <  1:627795/239‑1 (MQ=255)                                                                                                                      tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑GATTTTT‑TCCAACAAAA‑AAAAAAAAAGGAGTTT‑GCATGATGAGCGGAAATAAAAAACAAAAGACGGTGAATAAAGTGACAGAGAATTTTGCTAACTTTA‑CCGCCCAGATTTTTACCCC‑AAAGCCtgatg                                                                                                                           >  1:6178/1‑239 (MQ=255)                                                                                                                                tatttattCTTATTTCCCGGTTGATTCCCGAACTGTTATTTAATTATGCACGGTGACAAAAAATATAAACCCATATTTGTAGTGGTATTTTGTGGCGGT‑G‑AATTTTC‑CAAGAAAAAT‑AAAAAAAGTGGAGTTG‑CCATGAGGGGAAAAAGTAAGAAGAAACAGGAAGTGAATAAGTTGACAGAGTTTGTCGCTAATTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGa                                                                                                                 <  1:918014/239‑1 (MQ=255)                                                                                                                                          tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAAACCACTTTTTTAGTGGTAGTTTGGGGCGTT‑G‑AATTTTC‑CCAGAAAAAT‑ACAAAAACGGGAGTTG‑CCATGATGAGCGAAAGAAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGTTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                       <  1:58542/239‑1 (MQ=255)                                                                                                                                                atctttaaTTCACGAATTGTTAATTAATTATTCAGGGTAAAAAAAAAAAAAAACCCACATTTTTAGTGGTAGTTTGTGGGGGA‑A‑AATTTTT‑CCAAAAAAAT‑AAAAAATCTGGAGGTG‑CAAAGATGAGCGAAAAAAAAAAACAACAGGGAGTGAATAAGTGGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa                                                                                                 <  2:1087580/232‑1 (MQ=255)                                                                                                                                                       aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGtaat                                                                                                                                                                                                         <  1:639882/130‑1 (MQ=255)                                                                                                                                                              aaCTGTTAATTACATATTCACGGTGGAAAAAAATAAAAAACCACATTTTTAGTGGTATTTTGTGGCGGT‑A‑AATTTTT‑CCAGAAAAAT‑AAAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGa                                                                                                                 <  1:325240/209‑1 (MQ=255)                                                                                                                                                                 tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGa                                                                                                                 <  1:494748/206‑1 (MQ=255)                                                                                                                                                                   ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGa                                                                                                                                                                                                                <  1:1140724/111‑1 (MQ=255)                                                                                                                                                                   ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                               <  1:1190341/128‑1 (MQ=255)                                                                                                                                                                   ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACGGGAGTTG‑CCATGATGAGCGAAAGTAATAAGAAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGa                                                                                                                 <  1:1645686/204‑1 (MQ=255)                                                                                                                                                                   ttAATTACATATTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AA‑TTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGa                                                                                                                 <  1:1638786/203‑1 (MQ=255)                                                                                                                                                                     aaTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑TCAAAAAAAA‑ACAAAAAAAGGAGTTG‑CCATGATGAGGGAAAGAAATAAGCAAAAAGCAGTGAATAAGATGACAGAGATTGTCGCTAAATTTA‑ACACCATGATTTCTAACCG‑AATGACAGATGACGTGGTGGGTAAAATAAAAAAACAAAAGGAAGCCCAAAcaaccgcg                                                                            >  1:491441/1‑232 (MQ=255)                                                                                                                                                                          cATTTTCAGGGTGAAAAAAAATATAAAACCACATTTTGAGGGGTAGTTTGGGGGGTT‑G‑AATTTTC‑CAAGACAAAA‑AAAAAAACGGGAGTTG‑CGAGGAGGAGGAAAAGTAATAAGCAACAGGGAGTAAATAAGTTAACAGAGTGTTTCGCTATCTTTA‑CCGCCATGATTTCTACCCG‑AATGCCtgatg                                                                                                                           <  2:78764/187‑1 (MQ=255)                                                                                                                                                                          cATATTCACGGTGGCAAAAAATATAAAACCCCATTTTTAGTGGTAGTTGGTGGCGGT‑G‑AATTTTT‑CCAGAAAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAATTAATAAGAACCGGGCAGTAAAAAAGTTGACAGAGATTGTCGCTAACTTAA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGATGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATggg                                                                      <  1:707428/239‑1 (MQ=255)                                                                                                                                                                          cATATTCACGGGGGAAAAAAATAAAAACCCACATTTTTAGTGGTAGTTTGTGGGGGT‑G‑AATTTTT‑CAAGAAAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCAAAAGTAATAAGCACCAGGCAGTGAATAAGTTGACAGAGTTTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACgtg                                                                                                                      <  1:1103578/192‑1 (MQ=255)                                                                                                                                                                           atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑TCCAACAAAA‑ACAAAAAATGGAGTTG‑CCATGATGAGCGAAAGGAATAAGAAACACGCAGGGAATAAGTTGAAAGAGATTTTCGCTCAATTTA‑CCGCCCTGATTTTTTCCCGAAATGCC‑GGTGACGGGGGGGGTAAACTAAAAAAACTaaaag                                                                                             >  1:462331/1‑214 (MQ=255)                                                                                                                                                                            tatTCACGGTGGCAAAAAATATAAACCCACATTTTTAGTGGTATTTTGTGGCGGT‑G‑AATTTTT‑CAAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTTTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGa                                                                    <  1:1437289/239‑1 (MQ=255)                                                                                                                                                                            tatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTGTTTTGTGGCGGT‑G‑ATTTTTC‑CAAGAAAAAT‑AAAAAAACGGGATTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGAAGTAAATAAGTTGACAGAGTTTTTCGCTAATTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGa                                                                    <  1:1135704/239‑1 (MQ=255)                                                                                                                                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑TCAGACAAAT‑ACAAAAAATTGGGTTT‑TCATGATGAGGGAAAATAATAAACAACAAGCAGTGAATAAATTGGAAGAGATTGTCGCTAACTTTA‑ACCCCATGATTTTTTCCCG‑AATGCCTGATGACGGGGGGGGTAAAATAAAAAAAATAAAAGATGCCGCAACGACGC‑CGGTggggga                                                                   >  1:41744/1‑237 (MQ=255)                                                                                                                                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑A‑AATTTTT‑TTATAACAAA‑AAAAAAAAAAGAGGTG‑GCTTGATGAGGGGAAAAAAAAAGAAAAAAAGAAAGAAATAGATGAACAAGATTTGTGGTAATATTT‑ACACCATTATTTTTAACCG‑AATGCCTGATGATGTGGTGGGTAAACTAAAACAACTAAAGGAAGACGAAACGTCGTCCGATgggag                                                                    >  2:695099/1‑237 (MQ=255)                                                                                                                                                                                 aCGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTGTTTTGGGGCGGT‑A‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGAGGAGCGAAAAAAATAAGCAACAGGAAGTTAATAAGTGGACAGAGATTGTCGCTATTTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAAtt                                                               <  2:314352/239‑1 (MQ=255)                                                                                                                                                                                   ggTGGAAAAAAATAAAAAACCAAATTTTTAGTGGTATTTTGGGGGGGT‑G‑AATTTTT‑CCAAAAAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTAt                                                             <  1:354704/239‑1 (MQ=255)                                                                                                                                                                                    gTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑TCAGACAAAA‑AAAAAAAATGGAGTTG‑GCATGATGAGCGGAAGGAATAAGAAAAAGGCAGGGAATAAGATGACAGAGAATGTCGCTAAATTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGa                                                                                                                 >  1:78764/1‑187 (MQ=255)                                                                                                                                                                                    gTGGAAAAAAATAAAAAACCACTTTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAAAAAAAA‑ACAAAAACGGGAGTTG‑CCATGAGGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGTTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTAt                                                             <  1:964008/238‑1 (MQ=255)                                                                                                                                                                                     tGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGAAAAAT‑ACAAAAACTGGAGTTG‑CCTTGATGAGCGAAAATAATAAGCAACAGGCAGTGAATAATTTGAGAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATc                                                            <  1:1345914/238‑1 (MQ=255)                                                                                                                                                                                     tGGAAAAAAAAAAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑A‑AATTTTT‑CCAGACAAAT‑AAAAAAACTGGAGTTG‑CCTTGATGAGCAAAATTAATAAGCAACAGGCAGTGAAAAATTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATc                                                            <  1:176318/238‑1 (MQ=255)                                                                                                                                                                                      gaaaaaaaaaaTAAAACCACATTTTTGGTGGTGGTTGGTGG‑GGT‑G‑AATTTTT‑TCAAAAAAATAAAAAAAACGGTGGTTG‑CAATGTTGAGAGAAGGAAATAAGCACTTGGTAGTTAATAGGTGAACTGATGTTGTCGATATTTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCt                                                           <  2:112542/235‑1 (MQ=255)                                                                                                                                                                                           aaaaaaaaaaACCACATTTATGTTGGATGTGTGTGTGGGT‑G‑ATTTTGA‑CGAGAAAAAG‑AAAAAGAGTGGAGTTG‑CAATGATGAGAAAAATTAATAAGCCACAGGGAGTAAATAAGTTAACAGATATGGTGGTAAAGTTAA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATa                                                     <  2:2115514/239‑1 (MQ=255)                                                                                                                                                                                           aaaaaaaaaaACCAAATTTTAAGTGGTAGTTTGTGGCTGT‑A‑AATTTTA‑CCACAAAAAA‑ACAAAAACTGGAGTTG‑CCATGAGAAGCGAAAGAAATACGAACCAGGCAGTGAATACTTTGAAAAAGATTGTCCCAAATTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATa                                                     <  1:993308/239‑1 (MQ=255)                                                                                                                                                                                             aaTAGAAACCCACATTTTGAGTGGTATTTGGTGGCGGT‑A‑AATTTTT‑CCAGACAAAA‑AAAAAACCGGGATTTG‑CCATGATAGGCGAAAAAAAAAAGCACCAGGAAGAGAAAAAGTTGAAAGAGTTTTTCGTTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACg                                                   <  1:2126736/239‑1 (MQ=255)                                                                                                                                                                                             aaTAAAAAACCACATTTTAAGGGGTGTTTTGGGGGTGT‑A‑AATTTTT‑CAAGAAAAAA‑AC‑AAAACTGGGGTTGCCCATGAGGGGCAAAAAAAAAAAGCACAAGGCAGTAAAAATGTGAACGGAGATTTGCTTTATTTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACg                                                   <  1:1501819/239‑1 (MQ=255)                                                                                                                                                                                              aagataaaaCAAATTGTTAATTGTTGGTTGGGGGGGT‑GAAATTTTG‑CAAGAAAAAA‑ACAGAAACGGGTGTTG‑CTATGTTGACAGAAAGTAAGAACCACCAGTAGGTGAAGAAGTTGAAGCAGATTGAC‑CCAACGGTACCCGCAAAGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACTTCGT‑CGATGGGGAAAATTATCTCCCATACg                                                   <  2:851422/234‑1 (MQ=255)                                                                                                                                                                                               tataAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                               <  1:160645/100‑1 (MQ=255)                                                                                                                                                                                                 taAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AAATTTT‑TCAGACAAAA‑ACAAAAAATGGAGTTG‑CCATGATGAGCGGAAGGAATAAAAAACAGGCAGGGAAAAAAATGAAAGAGATTGTGGCTAACTTTA‑CCGCCATGATTTTTACCCG‑AAAGCCTGATGACGTGGTGGGTAAACTAAAACAGCTAAAAGATGCCGAAACGACGT‑CGATGGGGAAAATTATCTACCATACGATGt                                               >  1:1673047/1‑239 (MQ=255)                                                                                                                                                                                                        acaTTTTTAGTGGTTGTTTGGGGCGGT‑G‑AATTTTC‑CCACACAAAT‑AAAAAAACTGGAGTTC‑CCGGGATGAGTAAAAGTAATAAGCAACGGGCAGTGAATAAGTTGACAGAGATTGTCGTTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACGATGTTCGacaa                                        <  1:892924/239‑1 (MQ=255)                                                                                                                                                                                                          aTTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCa                                                                                                                                                                                             <  1:526915/91‑1 (MQ=255)                                                                                                                                                                                                              ttAGTGGTATTTTGGTGCTGA‑A‑TATTTTC‑CAACACAAAA‑ACAAAAAATGTTGTTG‑CAATGATGAGAGAAAGTAATAAGAAACAGGAAGTGAATAGTTTGACTGAGATTGTCGCTATCTTCA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCa                                  <  2:1513135/239‑1 (MQ=255)                                                                                                                                                                                                                      attttGGGGCGGT‑G‑AATTTTT‑CAAAAAAAAT‑ACAAAAACTGGAGTGG‑CCATGATGAGGAAAATTAATAAGCACCAGGCAGTAAATAAGTTGACAGAGATTGTCGTTAATTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                          <  1:714960/237‑1 (MQ=255)                                                                                                                                                                                                                      aGTTTGTGGGGGT‑G‑AATTTTC‑CAAATAAAAT‑ACAAAAACGGGAGTTG‑CCATGATGAGCAAAATAAAAAACAAACAGGCAGTGAATAAGTTAACAGAGATTTTCTCAAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                          <  1:268170/239‑1 (MQ=255)                                                                                                                                                                                                                      aGTTTGGGGGGGT‑T‑AATTTTC‑CCAAACAAAT‑AAAAAATCTGGAGTTG‑CGATGATGAGCGAAATTAATAAGCACCAGGCAGTTAATAAGTTGAAAGATATTGGCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                          <  1:584448/239‑1 (MQ=255)                                                                                                                                                                                                                      aGTTGGTGGCGGT‑G‑AATTTTT‑CCAGAAAAAT‑ACAAAAACTGGGGTGG‑CCAGTAGGAGCGAAGGTAATAAGCAACAGGAATAAAATAAGTGGAGAGAGATTGTGCTTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                          <  1:1481691/239‑1 (MQ=255)                                                                                                                                                                                                                        tttGTGGCGGT‑G‑AATTTTT‑CAAGACAAAT‑AAAAAAATTGGAGTGG‑ACATGATGAGCAAAAAAAATAAGCAACAGGAGGGGAATAGGTTGACAGGGGTTGTCGTTACTTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGAtt                        <  2:836446/239‑1 (MQ=255)                                                                                                                                                                                                                            tgGCGGT‑G‑AATTTTT‑TCCGACAAAA‑ACAAAAACTGGAGTTG‑CCATGATGAGCGGAAGAAATAAACAACAAGCAGTGAAAAAGTTGAAAGAGATTGTTGCTAACTTTT‑CCCCCAAGATTTTTACCCG‑a                                                                                                                                     >  1:1191974/1‑127 (MQ=255)                                                                                                                                                                                                                                                 gACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTc  >  1:1599661/1‑239 (MQ=255)                                                                                                                                                                                                                                                 gACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTc  >  1:1455234/1‑239 (MQ=255)                                                                                                                                                                                                                                                 gACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGCGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTc  >  1:1123636/1‑239 (MQ=255)                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                    TGAACGATTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTT‑CCAGACAAAT‑ACAAAAACTGGAGTTG‑CCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTA‑CCGCCATGATTTCTACCCG‑AATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGT‑CGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTC  >  NC_007779/3204857‑3205332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑