BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,645,110	A→T	100%	L140Q (CTG→CAG)	cyaA ←	class I adenylate cyclase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,645,110	0	A	T	100.0%	932.3 / ‑6.7	253	L140Q (CTG→CAG)	cyaA	class I adenylate cyclase
Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (116/134); minor base C (2/0); total (118/135)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 255 total aligned reads displayed.

AGCGTCATCACATAGTCGTCGTAATGCTCTTCTTCGTCGCACGGCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCAGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATACAGTTCAAGCTCGTTCAGGTAGTGGCGTTGAGTTTCATCAGGCGTGTA  >  NC_007779/3644876‑3645339

aGCATCATCACATAGTCGTCGTAATGCTCTTCTTCGTCGCACGTCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCctgcag                                                                                                                                                                                                                                   <  1:91088/239‑1 (MQ=255)

 gCGTCATCACATAGTCGTCGTACTGCTCGTCTTCGTCGCACGGCCCCATATTCAAAAGAATACGCTTACCGGCGAGTCGCCCGGCGGTACGATAAAATTCGTCAAGCAGCCAT‑ATATACTGGGGGGGTACACAATCTTCACCCCCCAGGCTGCAGACTTCATTATGACCGAAGCGGATTTCATCACTCAGGAAGCAGCTGGCATCCACCACCAGCGCAGCGTCCAACTTTTCctgcaa                                                                                                                                                                                                                                   >  2:188359/1‑237 (MQ=255)

      atcaCATAGTCGTCGTAATGCTCTTCTTCGTCGCACGGCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACa                                                                                                                                                                                                                             >  1:742650/1‑239 (MQ=255)

               tcgtcgTAATGCTCTTCTTCGTCGCACGGCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGc                                                                                                                                                                                                                                 <  1:1561843/226‑1 (MQ=255)

               tcgtcgTAATGCTCTTCTTCGTCGCACGGCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTg                                                                                                                                                                                                                    >  1:1248400/1‑239 (MQ=255)

               tcgtcgTAATGCTCTTCTTCGTCGCACGGCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTg                                                                                                                                                                                                                    >  2:518752/1‑239 (MQ=255)

                      aaTGCTCTTCTTCGTCGCACGGCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAAt                                                                                                                                                                                                             <  2:248404/239‑1 (MQ=255)

                             ttcttcGTCGCACGGCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGgcgc                                                                                                                                                                                                       >  1:118088/1‑238 (MQ=255)

                             ttctacGTCGCACGGCACCATATTCGACAGAATACGCTTAACGGCGAGACGCACGGCGGTACGAAAAAATTCGACAAGCAGCACT‑ATATGCAGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGCCGGAAGCGGATTTCATCACTCCGCACGAAGCGGACTTCAACACCCACCGAGGCGGCACCGTTTTCCCGCAGGCTACATTTACGTTGTAGCAATTggtcc                                                                                                                                                                                                       >  2:1138408/1‑235 (MQ=255)

                               cttcGTCGCACGGCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGctct                                                                                                                                                                                                    >  1:2039736/1‑239 (MQ=255)

                                      gCACGGCACCATATTCCACAGAATACGCTTACCGGCGAGGCGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTAt                                                                                                                                                                                             <  2:858199/239‑1 (MQ=255)

                                      gCACGGCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTAt                                                                                                                                                                                             <  1:1958663/239‑1 (MQ=255)

                                         cGGCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGa                                                                                                                                                                                          <  2:44750/239‑1 (MQ=255)

                                         cGGCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGGTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATGGGGCCTCTTCGCTATcca                                                                                                                                                                                          >  2:1499099/1‑237 (MQ=255)

                                             aCCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCa                                                                                                                                                                                      <  2:515916/239‑1 (MQ=255)

                                                 tataCCACGGAATACGCTTACCGTCGAGACGCCCGGCGGTCCGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGc                                                                                                                                                                                        <  2:1864044/233‑1 (MQ=255)

                                                 tatTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGAt                                                                                                                                                                                  >  1:800814/1‑239 (MQ=255)

                                                   ttCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCa                                                                                                                                                                                      <  1:764828/233‑1 (MQ=255)

                                                        caGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTAAGTTGTAGCAATTGGCGCTCTTCCTCATCGAGCCAGGATtgattaa                                                                                                                                                                           >  2:2072399/1‑236 (MQ=255)

                                                         gaaggccccTTACCGGCGAGCCGCCCGGCGGAAACAGAAAAGTCGTCAAGGAG‑AGTGATATGCTGGGGGGAGCCACAATCGTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAGGCGGTTTTCATCGATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGGTTTCCTGCAGGCTACTTTTACGTTGTAGCAATTTGCGCTCGTCGCTATCGAGCCAGGATtgatga                                                                                                                                                                            <  2:1264449/229‑1 (MQ=255)

                                                         aGAATACGCTTACCGGCGAGACGCACGGCGGAACGATAAAATTCGCCAAGCAACAGT‑ATCCGCTTGGTAGCGCCCCAATTCTCGCCCCCCAAGCAGCCGCTTTCATTATGACGGAAGCGGTTTTCATCCATCAGGAATGAGCTGACTTCCCCACCCACCCAGGCGGCCCCCTTTTCCCTCAGGCTACATTTCATGTGTAGCCATTGGCGCTCTTCGCCATCGACCCAGGAAtgatgaaa                                                                                                                                                                          >  2:1698634/1‑237 (MQ=255)

                                                           aaTACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATtgatga                                                                                                                                                                            >  1:2082767/1‑235 (MQ=255)

                                                           aaTACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATtgat                                                                                                                                                                              >  1:1864044/1‑233 (MQ=255)

                                                           aaTACGCTTACCGGCGAGACGCACGGCGGTAAGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGAAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAg                                                                                                                                                                         >  1:1677536/1‑238 (MQ=255)

                                                             tACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGGAGT‑ATATGCTGGGTGGAGCCACAATCCTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGCCTTTCCCACCCAACGAGGCGGCCCAGTTTTCCTGCAGGCCACCTTTACGTTGTAGCAATTGGCCCCCTTCCCTATCGAGCCAGGATtgatgt                                                                                                                                                                            >  2:764828/1‑232 (MQ=255)

                                                             tACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTa                                                                                                                                                                                              >  1:1943438/1‑215 (MQ=255)

                                                                     ccGGCGAGACGCCCGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCAGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACCCCCAGCGAGGCGGCCCAGTTTTCCTCGAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGATATCGAGCCAGGATTTATGACAGACCCaaaaat                                                                                                                                                               >  2:131139/1‑233 (MQ=255)

                                                                     ccGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATtgatga                                                                                                                                                                            >  1:1222666/1‑225 (MQ=255)

                                                                     ccGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATtgatga                                                                                                                                                                            >  1:1894/1‑225 (MQ=255)

                                                                     ccGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACa                                                                                                                                                                          <  1:722346/227‑1 (MQ=255)

                                                                     ccGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACa                                                                                                                                                                          >  2:722346/1‑227 (MQ=255)

                                                                     ccGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGatat                                                                                                                                                               >  1:273428/1‑238 (MQ=255)

                                                                     ccGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCCCTTCGCTATCGAGGCAGGGTTGATTAGCGACCCAGatat                                                                                                                                                               >  2:1089505/1‑238 (MQ=255)

                                                                                        tACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACCACtt                                                                                                                                           >  2:838442/1‑239 (MQ=255)

                                                                                                     gTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCGGACTTCCCCACCCAGCGGGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACg                                                                                                                              <  2:1616881/239‑1 (MQ=255)

                                                                                                       cAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAg                                                                                                                            >  2:1801493/1‑239 (MQ=255)

                                                                                                         agcagcAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGt                                                                                                                          <  1:1698634/239‑1 (MQ=255)

                                                                                                            agcagT‑ATATGCTGGGTGGAGCCACAATCTTCTCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGtgc                                                                                                                        <  1:2122689/238‑1 (MQ=255)

                                                                                                            agcagT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGtgc                                                                                                                        <  1:518752/238‑1 (MQ=255)

                                                                                                            agcagT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGtg                                                                                                                         <  1:63025/237‑1 (MQ=255)

                                                                                                                  aatagtcTGGTTGGAGCCGCAAGCTTCGCCCCCCAGGTTGCCGCTGTCATGATTACGGAACCGGTTTTCTGCAATCAGGAAGAAGCGGTCTGCCACACGCAGCGAGGGGGGCCAGTTTTACTGCAGGAAACGTTTGCGATGTAGCAATTGGTGTTCTTCGCTATCGAGCCAGGATTGATGACGGACCGAGCGATCCACGTGAGGGGAACAGCTTTGCCCTACGGACGGGGTGTTGcccc                                                                                                                  <  2:23764/233‑2 (MQ=255)

                                                                                                                   atatGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCAt                                                                                                                 <  1:728531/239‑1 (MQ=255)

                                                                                                                    tatGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGCAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACGCCCAGCGAGGCGGCCCAGTTTCCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATg                                                                                                                <  2:1488562/239‑1 (MQ=255)

                                                                                                                      tGCGGGGAGGAGCCACAATCTTCGCCCCCCAGGCTGCCGATTTCATTATTATGGAGGCGTTTGTCATCAATCAGGAAGAAGCTGACGTCCACACGCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTAGGATGTAGCAATTCACGCGCTGCGCTATCGTGCCGGGATTGATGACAGACCCAGATATCCAGGGCAGAGGAACGAATAAACCGTAAGGACGAGGGGCTGccgagtgc                                                                                                              >  2:1552448/1‑233 (MQ=255)

                                                                                                                         tGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATtgatga                                                                                                                                                                            <  2:77436/174‑1 (MQ=255)

                                                                                                                         tGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGa                                                                                                                                                                        <  1:1003598/178‑1 (MQ=255)

                                                                                                                         tGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCGGGTCAGAGGAACAACTTTGCCCTACGGACGAGGtg                                                                                                                         <  2:409333/225‑1 (MQ=255)

                                                                                                                         tGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGtg                                                                                                                         >  1:409333/1‑225 (MQ=255)

                                                                                                                         tGGGTAGAGCCACAATCTTCCCACCCAAGGCTGCCGCTTTGATTACGACGGAAGCGGTGTTGATCAAACAGGAAGAAGCTGACTTCCACACCAGGCGAGGCGGCGCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGATATCGAGCCATGATTGACGACAGACCAAGACATACAGGTCAGAGGCACAATTTTGCCCTACGTACGAGGagatgcaaatgatatc                                                                                                           >  2:1027144/1‑229 (MQ=255)

                                                                                                                          gggTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCg                                                                                                                                                                                                 >  1:688599/1‑152 (MQ=255)

                                                                                                                          gggTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCg                                                                                                                                                                                                 <  2:688599/152‑1 (MQ=255)

                                                                                                                          gggTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGtat                                                                                                          <  1:1401444/239‑1 (MQ=255)

                                                                                                                           ggTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGgcg                                                                                                                                                                                                        >  1:1729861/1‑144 (MQ=255)

                                                                                                                           ggTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCAt                                                                                                                 <  1:296585/231‑1 (MQ=255)

                                                                                                                            gTGGAGCTACATGCTGAGCCCCCCGGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACGCCCAGCGAGGCGGCCCAGTGGTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGCGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCGATGGTGtatt                                                                                                         <  2:1248400/238‑2 (MQ=255)

                                                                                                                            gTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCCGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCAAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGACGCCCATGGGGTATac                                                                                                        >  2:2031385/1‑239 (MQ=255)

                                                                                                                            gTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGc                                                                                                                                                                                                                                 >  1:1519674/1‑118 (MQ=255)

                                                                                                                            gTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATac                                                                                                        >  1:898263/1‑239 (MQ=255)

                                                                                                                            gTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGACCTACGGACGAGGGGCTGCCCATGGTGTATac                                                                                                        >  1:655189/1‑239 (MQ=255)

                                                                                                                            gTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGATGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGAGCTGCCCAGGGTATATac                                                                                                        >  2:669651/1‑239 (MQ=255)

                                                                                                                              ggAGGCACAAGCTTCGCACCCCAGGCTGCCGCTTTCATTAGGACGGACGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACTCCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATacac                                                                                                      <  2:1807089/239‑1 (MQ=255)

                                                                                                                                aGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACATACCCAGATATCCAGGGCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCACATGGTGAAAACACCa                                                                                                    >  2:1953041/1‑239 (MQ=255)

                                                                                                                                aGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACg                                                                                                                              <  1:851834/213‑1 (MQ=255)

                                                                                                                                aGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCa                                                                                                    >  1:1849074/1‑239 (MQ=255)

                                                                                                                                aGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGAGCTGCCCAGGATTGATACACCa                                                                                                    >  2:1189211/1‑239 (MQ=255)

                                                                                                                                            cGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGaa                                                                                          >  1:1778654/1‑237 (MQ=255)

                                                                                                                                            cGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCCTCGCTATCGAGCCAGGATAGATGACAGACCCAGATATCCAGGCCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGaa                                                                                          >  2:1530599/1‑237 (MQ=255)

                                                                                                                                                  ccAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGGGTATACACAAGTAATTGGAAGCTCACCt                                                                                  >  1:527612/1‑239 (MQ=255)

                                                                                                                                                  ccAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGAAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACAAGTAATTGGAAGCTCACCt                                                                                  >  1:1996122/1‑239 (MQ=255)

                                                                                                                                                        tGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATTGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTcggc                                                                            <  1:127612/239‑1 (MQ=255)

                                                                                                                                                        tGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTcggc                                                                            <  2:118088/239‑1 (MQ=255)

                                                                                                                                                        tGCCGCTGTCATTATGACGGAATCTGGTTTCATCAATCAGGAAGAAGCTGACGTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTcggc                                                                            <  2:1394090/239‑1 (MQ=255)

                                                                                                                                                              tttCATTCTGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATc                                                                       <  2:1749082/238‑1 (MQ=255)

                                                                                                                                                                     aTGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGtg                                                                                                                         <  1:1533652/181‑1 (MQ=255)

                                                                                                                                                                            aaGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCa                                                                                                                                                                                      >  2:736322/1‑113 (MQ=255)

                                                                                                                                                                            aaGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGaa                                                                                                                                                 <  2:596570/150‑1 (MQ=255)

                                                                                                                                                                            aaGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGaa                                                                                                                                                 <  1:1494262/150‑1 (MQ=255)

                                                                                                                                                                            aaGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGaa                                                                                                                                                 >  1:596570/1‑150 (MQ=255)

                                                                                                                                                                             agaggTTTTCATCAATCAGGAAGAAGCTTAGTTCGACACCCAGCGAGGCTGCCCATTGTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCGATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACCCCAGTAATTGGAAGCTCGCCTTTCGGCGGATCCTGTACTGACATTcgt                                                       <  2:307799/236‑3 (MQ=255)

                                                                                                                                                                                   tttCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATa                                                  <  2:1778654/238‑1 (MQ=255)

                                                                                                                                                                                   tttCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATa                                                  <  1:369125/238‑1 (MQ=255)

                                                                                                                                                                                    ttCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGa                                                                                                                                                                        >  1:517841/1‑119 (MQ=255)

                                                                                                                                                                                         caatcaGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATACAGTTCa                                           <  2:287798/239‑1 (MQ=255)

                                                                                                                                                                                          aatcaGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGc                                                                                                                                                                                                                                 <  2:1933923/56‑1 (MQ=255)

                                                                                                                                                                                           atcaGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTTGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATACAGTTCAAg                                         <  2:898263/239‑1 (MQ=255)

                                                                                                                                                                                                          aCTTCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGtgct                                                                                                                       <  1:1923702/146‑1 (MQ=255)

                                                                                                                                                                                                            ttCCACACCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTTGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATa                                                  <  1:970105/213‑1 (MQ=255)

                                                                                                                                                                                                               cacaCCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATACAGTTCAAGCTCGTTCAGGTAGTGGCGtt                     <  1:1189211/239‑1 (MQ=255)

                                                                                                                                                                                                                 cacCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATACAGTTCAAGCTCGTTCAGGTAGTGGCGTTGa                   <  2:1579305/239‑1 (MQ=255)

                                                                                                                                                                                                                 cacCCAGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATACAGTTCAAGCTCGTTCAGGTAGTGGCGTTGa                   <  1:1089505/239‑1 (MQ=255)

                                                                                                                                                                                                                      aGCGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATacac                                                                                                      <  1:1042489/151‑1 (MQ=255)

                                                                                                                                                                                                                        cGAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCCGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATACAGTTCAAGCTCGTTCAGGTAGTGGCGTTGAGTTtca             >  1:512269/1‑238 (MQ=255)

                                                                                                                                                                                                                         gAGGCGGCCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCCCGATACAGTTCAAGCTCGTTCAGGTAGTGGCGTTGAGTTtcat            <  1:1138408/238‑1 (MQ=255)

                                                                                                                                                                                                                           ggcggcCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATACAGTTCAAGCTCGTTCAGGTAGTGGCGTTGAGTTTCATCAg         >  1:444333/1‑239 (MQ=255)

                                                                                                                                                                                                                             cggcCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACTCCAGTCATTGGAAGCTCACCTTTCGGAGGATCCTGTACTGACATTCCACGATACAGTTCAAGCTCGTTCAGGTAGTGGCGTTGAGTTTCATCAg         <  1:1647197/237‑1 (MQ=255)

                                                                                                                                                                                                                             cggcCCAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATACAGTTCAAGCTCGTTCAGGTAGTGGCGTTGAGTTTCATCAgg        <  1:1349880/238‑1 (MQ=255)

                                                                                                                                                                                                                             cggcCCAGTCTTCCTGCAGGTTACATTTACGGTGTAGCAATTGGGGCACGTCGCTATCGATGCTTGATTGATGACAGACCCAGATATCGAGGTCAGAGGAACAAAGTTGCCCTACGTACGAGGTGCTGCCCATTGTGTATACACCAGTAATTAGTAGCTCCCCTTTCGGCGGATCTTGTACTGACATTCCACGATACAGTTCAAGCTCGTTCAGGTAGTGGCGTTGAGTTTCATCAGGc       <  2:2000672/239‑1 (MQ=255)

                                                                                                                                                                                                                                cccAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGAt                                                                        >  1:710428/1‑171 (MQ=255)

                                                                                                                                                                                                                                cccAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATACAGTTCAAGCTCGTTCAGGTAGTGGCGTTGAGTTTCATCAGGCgtg    >  1:2022463/1‑239 (MQ=255)

                                                                                                                                                                                                                                  cAGTTTTCCTGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATACAGTTCAAGCTCGTTCAGGTAGTGGCGTTGAGTTTCATCAGGCGTGTa  <  2:121465/239‑1 (MQ=255)

AGCGTCATCACATAGTCGTCGTAATGCTCTTCTTCGTCGCACGGCACCATATTCCACAGAATACGCTTACCGGCGAGACGCACGGCGGTACGATAAAATTCGTCAAGCAGCAGT‑ATATGCTGGGTGGAGCCACAATCTTCGCCCCCCAGGCTGCCGCTTTCATTATGACGGAAGCGGTTTTCATCAATCAGGAAGAAGCTGACTTCCACACCCAGCGAGGCGGCCCAGTTTTCCAGCAGGCTACATTTACGTTGTAGCAATTGGCGCTCTTCGCTATCGAGCCAGGATTGATGACAGACCCAGATATCCAGGTCAGAGGAACAACTTTGCCCTACGGACGAGGTGCTGCCCATGGTGTATACACCAGTAATTGGAAGCTCACCTTTCGGCGGATCCTGTACTGACATTCCACGATACAGTTCAAGCTCGTTCAGGTAGTGGCGTTGAGTTTCATCAGGCGTGTA  >  NC_007779/3644876‑3645339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`