| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 432,873 | T→G | 25.5% | G65G (GGT→GGG) | ribD → | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase RibD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 432,873 | 0 | T | G | 25.5% | 95.7 / 8.9 | 77 | G65G (GGT→GGG) | ribD | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase RibD |
| Reads supporting (aligned to +/- strand): ref base T (14/41); new base G (17/4); total (32/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.59e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.25e-01 | |||||||||||
ATTTGGCGAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATGCGCACC > NC_007779/432642‑433110 | gtttGGCGAAGAGATCGCGCGCCGGGAGGACTAAGCCGTGCAGGACTAGTATTACAGGGCGCGGGGTCTAAAGCTGGCGCACCGAGGACGTTTTACCACGAATCCCACCCGGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTCCCACCAACGTGCGGGTGACCCACATGCCGAAGTACACGCGTTGCTTAGGGCGGGTGAAAAAGCCAAAGGTGCGAc < 2:703791/236‑1 (MQ=255) tttGGCGAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGATGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCACCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAAACAAAGAGGCGAccc > 1:454616/1‑237 (MQ=255) gAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGAAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCACCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGt < 1:774049/239‑1 (MQ=255) gcgcgcCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGa < 1:267310/239‑1 (MQ=255) gaggaTAAAGCGGTGCAGGAGAGGTATTACAGGGGGGGGGGGTAAAGGCTGGCGAAACGAGGCGTTTTTCCCACGCAGCCCAACCCGAATGTCGGGTGGGTCATTGTCAAAGAGGGCGAAAG‑TGGCGGTGAAGGTTACCCCGAACGTGGGGGTGACCCAAAGGCGGAAGTACCCGCGTTGCGTATGGGGGGTAAAAACGCAAAGGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTa < 2:1005385/238‑1 (MQ=255) gaggaCTAAGCCGTGCAGGACGAGTATTCCATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGCCTTTTTCCCACGCATCCCAACCCGAAGGTCGGGTGCGTCATTGTAAAAGATGGCAAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTAAAAAAGCAAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTa < 1:1862815/238‑1 (MQ=255) gaggaCTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTa < 1:916215/238‑1 (MQ=255) gaggaCTAAGCCGTGCAGGACGAGTATTACAGGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCACCCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTGGGTGAAGTTTCCCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTGGCGTATGGCGGGTGAAAAACCAAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTa < 1:601268/238‑1 (MQ=255) gagaccgaaGGCGGGCAGGACGAGTATACCAGGGCACGGGCGCTAAGGCGGGCGCAACGAGTACGTTTTACCACGAATCCCAACCGGAATGTCGGGTGCGTCATTGACAAAGATGGGGAAAT‑TGTGGGGGAAGGTTACCACCAACGGGCGGGTAACCCACATGCCGAAGTACCCGCGTTGCGTATGGCGGGTGAAAAAGCGAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTa < 2:1245966/231‑1 (MQ=255) cTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGGAAAAACCAAAAGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCcatc > 1:836491/1‑239 (MQ=255) ggCCGGGCAGGACGGTTATTACATGGCGCGGGCGCAAAAGCTGGCGCAACGAGGACGTTTTCCCCGCCACCCCACCCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAGGGTTACCACCAGCGTGCGGGTGAACCAAATGCCGAAGTACACGGGTTGCTTATGGCGGGTAAAAAAGCCAAAGGGGCGa < 2:865828/202‑1 (MQ=255) aGCCGGGCGGGAGGAGTAGTAGCGGGCGCGGGCGCAAAGGGGGGCGTGACGGGGAGGTTTTACCCCGCATCCCAACCCGAAGGGCGGGTGCGTCCTGGTCAAAGAGGGCAAAAT‑GGGCGGTGAGGTTTACCCCCACAGGGGGGGGAAACCACATGCGGAAGTACCCGCGTCGCGTAGGGCGGGGGAAAAGCCGAAGGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCcatcat < 2:551588/238‑1 (MQ=255) ccGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAACCAAAAGGGCGACCCCCCATTTCACA‑CTCCAACCCAGTTG‑catcatcagg > 1:246032/1‑235 (MQ=255) cGTTCAGGACGATTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACTTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTATCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAATTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTc < 1:1681650/239‑1 (MQ=255) cGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGACCCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATgg < 1:634884/237‑1 (MQ=255) cGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATgg < 1:1087905/237‑1 (MQ=255) tGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGGAAAAGCCAAAAGAGCGGCCGCCTATGTCAAC‑ATCGCACCCCGTAGCCCTCCTGGTCGt > 1:504322/1‑239 (MQ=255) tGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGGAAAAACCAAAAGGGCGACCGCCCATGTCACA‑CCCGAACCCTGTAGCCATCCTGGGCGt > 1:963136/1‑239 (MQ=255) tGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAAACAAAAGGGCGACCGCCCATGTCACC‑CTCGCACCCTCTAGCCATCAATGTCg > 1:2066055/1‑238 (MQ=255) gACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAAGGGCGACCGCCCATGt > 1:865828/1‑203 (MQ=255) cGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCa < 1:1321503/238‑1 (MQ=255) aGTATTACATGGCGCGGGCGCTAAAGCGGGCGCAACGAGAACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCg < 1:1366443/207‑1 (MQ=255) tATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCg < 1:419713/186‑1 (MQ=255) ttACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAACCAAAGGGGCGACCGCCCATGTCACA‑CCCCAACCCTTTAGCCCTCCAGGTCGTACGCCCCCgcggc > 1:1400691/1‑235 (MQ=255) aCATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCACCCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACCCGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGTTGCGACCGCCTATGTCACA‑CTCGa < 1:1745995/202‑1 (MQ=255) aCATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAACCAAAGGGGCGACCGCCCATGTCACA‑CTCCAACCCTGGAGCCATCATGGTCGGACGCCACCGTGCcgt > 1:1040493/1‑239 (MQ=255) ggCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAACCAAAAGTGGGACAGCCCACGTCACA‑CTCGAACCCCGTAGCCATCATAGGCGCACGCCACCCTGCTCTGAc > 1:2089800/1‑238 (MQ=255) gcgcGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAAGTGCGACCGCCTATGTCACA‑CCCGAACCCTGTAGc > 1:1447391/1‑207 (MQ=255) cgcgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAACCAAAAGTGCGACCCCCCATTTCACA‑CCCCAACCCCGTAACCAACATTGTCGTAAGCCCCCGGGCGTTGACGc > 1:1912775/1‑238 (MQ=255) cgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAACCCAAGGGGCGACCGCCTGTGGCACA‑CTCGAACCCTGTAACCATCATGGGCGTACg > 1:1482074/1‑219 (MQ=255) cgcTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCACCCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑GGTCGGTGAGGGTTCCCCCCAGCGTGCGGGTAAACCACATGCCGAAGTACGCGCTTTGCGTATGGCGGGTGAAAAGGCCAAGGGGGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCAt < 1:1597777/238‑1 (MQ=255) cGTTTTCCCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGTTTACCACCAACGTGCGGGTGACCCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTAAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACg < 1:316298/208‑1 (MQ=255) tACCACGCATCCCAACCCGAATGTCGGGGGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGGGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCt < 1:652968/239‑1 (MQ=255) cccccgcccccACCCGAGTGTGGGGGGCTTCTTGGACAAAGA‑GGGGAAATGTGTCGGGAAGGGTTCCCCCCAGGGTGGGGGTGACCCACAGGACGAAGCACGCGTGTTGCGTATGGCGGGTGAAAAACCCAAAGGTCGGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGa < 2:1400691/232‑1 (MQ=255) aTCCCAACCCGAAGGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCACCGTGCGGGTGAACCACATGCCGAAGTACACGCGTGGCGTATGGCGGGTGAAAAAGCAAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCa < 1:856613/238‑1 (MQ=255) cccAACCCGAATGTCGGGTGCGTCATTGTCAAAGAGGGCGAAAT‑TGTCGGTGAAGGTTCCCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGaa < 1:1588335/153‑1 (MQ=255) aCCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGACCCACATGCCGAAGTACACGCGTTGCGTATGGGGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCt < 1:1645709/239‑1 (MQ=255) cGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGTCGGGTGAAAAAGCCAAAGGGGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGGACGCCACCGGGCTGTGACGCACTCATCGCCGCTGGCGGAGCGCGCGTGGGTTCCCCGATGCAAGA‑TCCTAACCCGCAGGTCGCTg > 1:1631617/1‑239 (MQ=255) cGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAACCAAAAGGGCGACCGCCTATGTCACA‑CTCCAACCCTGTAGCCCTCATGGGCGTTCGCCCCCGTGCtgtg > 1:2010111/1‑170 (MQ=255) cATTGTAAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGc < 1:290671/239‑1 (MQ=255) gTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGTGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTgg > 1:1668142/1‑239 (MQ=255) tCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCACCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCtgtg < 1:309157/162‑1 (MQ=255) aaGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGCATGGCGGGGGGAAAAGAAAAAAGGGGGGGCGACCATGTTACA‑CTAGAACACTGAAGCAAACAAGGGCGAAAGGCACCGGGCACGGACGTACTCAACACCGCCGGCGTAGAGGGAGCGGCAGCCTCGATGCAACAGTGCAAACCCACGCGT‑GCTGGGCGTgggcgt > 2:644650/1‑235 (MQ=255) tGGCAAAAT‑TGTCGGTGAAGGTTACCACCACCGTGCGGGTGAACCCCATGCCGAAGTCCCCGCGTTGCGTATGGCGGGTGAAAAAGCAAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTa < 1:734669/237‑1 (MQ=255) cGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGGGCGACCGCCTATGTCACA‑CTCGAACCTTGTAGCCATCATGGGCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAg > 1:1138179/1‑191 (MQ=255) gTGAAGGTTACCACCATCGTGCGGGTGAACCCCATGCCGAAGTCCCCGCGTTTGTTTTGGCGGTTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGc < 1:644650/238‑1 (MQ=255) gTGAAGGTTACCACCAGCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGc < 1:921523/238‑1 (MQ=255) caccaACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGACAAAGGGGCGACCGCCCATGTCACA‑CTCGAAACCTGTAGCCATCATGGGCGTGCGCCCCCGGGCTGTGAAGCACTCATCGCCGCTGGCGTAGCGCGCGGGGGTGCCTCGATGCaaaa > 1:1560898/1‑177 (MQ=255) aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGGAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAAACCTGTAGCCATCATGGGCGTACGCCAcc > 1:2023099/1‑117 (MQ=255) aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGcc > 1:1522324/1‑239 (MQ=255) aCGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGGGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGGGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGc > 1:1822983/1‑238 (MQ=255) cGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATcgc < 1:809955/137‑1 (MQ=255) gCGGGTAAACCACATGCCGAAGCCCACGCGTTGCGTAGGGCGGGTAAAAAACCAAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑g < 1:1185880/238‑1 (MQ=255) aagggTGAACCACATGCCGAAGTACACGCGTTGCGTAGGGGGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑g < 1:1428077/236‑1 (MQ=255) cGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGGAAAAACCAAAAGGGCGACCGCCCATGTCACA‑CACCCACCCCGTAGGCAACATCGTCGGACGCCACCCCGCTGTGTCGCCCCCCACGCCGCCGGCCGAGCCCCCGCGCGTGCCTCCCTGCAAAG‑TCCCAAACCGCCCGCCGCCGCGCGGTGGCTTTTCCGGCTGCCACCGGCTTGCATTGACGTCCACCAC‑gg > 2:952840/1‑238 (MQ=255) accccaaTGCCGAAGTCCGCGGGTTGCGTAGGGCGGGTAAAAAGGCCAAGGGTGCGGCCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCtgatg < 1:952840/233‑1 (MQ=255) aaCCACATGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAACCAAAAGGGGGACCCCCCATGTCACACCCCGAACCC‑GTAGCACTCATGGGCGTACGCCACCCTGCTGTGAAGCACCCCTCCCCGCCCGCGTa > 2:809955/1‑137 (MQ=255) aatgcgaaaGTACTCGCGTGGCGTAGGGCGGGTAAAAAACCCAAGGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAg < 1:2042995/232‑1 (MQ=255) tGCCGAAGTACCCGTGTTGCGTAGGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGt < 1:1992635/181‑1 (MQ=255) tGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGGGACCGCCTATGTCACA‑CTCGAACCCTGTAACCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCCCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGGGGACTTTACCGTCTGCAACAGGCTGGCATTGa > 1:1472278/1‑213 (MQ=255) tGCCGAAGTACACGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGGCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGAc > 1:182395/1‑214 (MQ=255) ccacGCGTTGCGTATGGGGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAg < 1:768768/237‑1 (MQ=255) cacGCGTTGCGTATGGCGGGTGAAAAAACCAAAAGTGCGACCGCCCCTGTTACA‑CACGAACCCCGTAGACATCATGGTCGGACGCCACCGTGCTGTGACGCACTCATCGCCCCCGGCGGAGCGCGCGGGGGTGCCTCGATGCAACA‑ACCTAACCCGCCGGGCGCTGGGGGTGGGCTTTTcc > 2:1992635/1‑181 (MQ=255) cacGCGTTGCGTATGGCGGGGGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGGCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCCTTGACGTCAGCCAC‑GGCCtgatgatga > 1:275320/1‑226 (MQ=255) ccgcgTTGCGTAGGGGGGGTGAAAAAGCAAAGGGGGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCaa < 1:1950715/238‑1 (MQ=255) acggtttgtttATGGGGGTAGAAAAACCAAAGGGTGCGCCCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCaa < 1:1924405/229‑1 (MQ=255) cGTATGGGGGGTAAAAAAGCCAAGGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGc < 1:2112139/155‑1 (MQ=255) atATGGGGGGTAAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCAATTGAATaa < 1:436928/237‑1 (MQ=255) aTGGCGGGTGAAAAAGCCAAGGGGGCGACCGCCTATGTCACA‑CTCGATCCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAg < 1:870471/238‑1 (MQ=255) gCGGGTGAAAAAGCCAAAGGGGGGACCCCCCCTGTCACA‑CTCGAACCCTGTAGGCATCATGGTCGTACGCCACCGTGCTGTGACGCCCTCATTCCCCCTCGCCTAGCGCCCGGGGGTGGCCCGATGCAAAA‑TCCTTACCCCCAGGGCCGGCGGCGTGGGCGTTCCCGTCTGCCACACGCTGGGCTTGACGTCCGCCCCGGGCCTGCTGTGGGGGAAAGCCGAGCAAttaacaaaagtgt > 2:1263858/1‑228 (MQ=255) gTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCaa > 1:869127/1‑170 (MQ=255) aaaaaGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAg < 1:1560960/239‑1 (MQ=255) aaaaaGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAg < 1:1458470/239‑1 (MQ=255) aaaaaCCAAAAGGTGCAACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAg < 1:1247795/239‑1 (MQ=255) cAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATgc > 1:1099479/1‑239 (MQ=255) aaaGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATgc > 1:1064769/1‑238 (MQ=255) gTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATGCGCa < 1:837831/237‑1 (MQ=255) tGCGGCCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATGCGCAcc < 1:1374012/238‑1 (MQ=255) | ATTTGGCGAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAAT‑TGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACA‑CTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGA‑TCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCAC‑GGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATGCGCACC > NC_007779/432642‑433110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |