Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	4,446,876	T→A	9.6%	intergenic (‑20/‑186)	msrA ← / → tamA	peptide‑methionine (S)‑S‑oxide reductase MsrA/autotransporter assembly complex protein TamA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	4,446,876	0	T	A	9.6%	299.9 / 2.5	94	intergenic (‑20/‑186)	msrA/tamA	peptide‑methionine (S)‑S‑oxide reductase MsrA/autotransporter assembly complex protein TamA
Reads supporting (aligned to +/- strand):  ref base T (17/66);  new base A (8/2);  total (25/69)
Fisher's exact test for biased strand distribution p-value = 3.23e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATCCGACAGTTATGCTGTGTAAGCTTAC  >  NC_007779/4446639‑4447098                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                  taGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATc                                                                                                                                                                                                                                  <  1:1239986/239‑1 (MQ=255) taGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATc                                                                                                                                                                                                                                  <  1:1772459/239‑1 (MQ=255)       gcggcgGTGCTGTAAACGCCGGGTAACTGCCAGACCAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCAt                                                                                                                                                                                                                            <  2:959749/239‑1 (MQ=255)       gcggcgGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCAt                                                                                                                                                                                                                            <  1:291778/239‑1 (MQ=255)       gcggcgGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCAt                                                                                                                                                                                                                            <  1:260842/239‑1 (MQ=255)         ggcggTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCAtt                                                                                                                                                                                                                           <  1:856707/238‑1 (MQ=255)               gCTGTAAACGCCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGtt                                                                                                                                                                                                                    <  1:573926/238‑1 (MQ=255)               gCTGTAAACGCCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTa                                                                                                                                                                                                                   <  1:72146/239‑1 (MQ=255)               gCTGTAAACACCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGtt                                                                                                                                                                                                                    <  2:938955/238‑1 (MQ=255)                        gCCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑GAAACAGAGGGTTTTTTTTAAAAAAACTC‑ATGGTGTCGCTTCCCCGCAAAACGGGCATTT‑GGGTTAAGGGTGTaa                                                                                                                                                                                                          >  1:1918308/1‑239 (MQ=255)                          cGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGAGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑GAAGCCGAGGCGTTTTTTCATATAAACAC‑AAGGGGGCGCGCTCCCGAAACACGGTCATTG‑CGGTTATGGGTGTaaaa                                                                                                                                                                                                        >  2:1846002/1‑237 (MQ=255)                               aaCTGGCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCAGTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAgg                                                                                                                                                                                                   <  2:348870/239‑1 (MQ=255)                               aaCTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAgg                                                                                                                                                                                                   <  1:1846002/239‑1 (MQ=255)                                      aGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAAACAGATGCTTTTTTTTAAAAAAAATC‑ATGGGTGCGCCCTCCCGAAAATCCGTCATTA‑GGGGTAAAGGTGTAACAAAAGGGGTAttt                                                                                                                                                                                            >  1:1473549/1‑239 (MQ=255)                                        aaCAGTCGATCCACCCCCCAGAAAGATCCCAGTGCATGAATGTTAATCTGCATTCCGTCCGGTTCAGTGGTCAGTGAGTGACCGCTGAGCGCATGCAGCGTGGCTTCGGGCAACGGAGTAGTACGTCCAGGCAGGACATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCATTCTCCCGTAAAGCGGGCAGTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGc                                                                                                                                                                                          <  2:10473/239‑1 (MQ=255)                                         aCAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGc                                                                                                                                                                                          <  1:2075736/238‑1 (MQ=255)                                         aCAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGc                                                                                                                                                                                          <  1:878283/238‑1 (MQ=255)                                              cacTCCGCCCCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGCGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGcac                                                                                                                                                                                        <  2:1811032/233‑1 (MQ=255)                                              cGCTCCACACCCCAGAAGCAACCCATCGGAAAAATGGCAATCGCCATTCCGGCAGTTACATTGGTCCTTGAGTTACCGTTGAACGCATGCATCGTGGATACGGGAATCGGGGTGTTACGTCCAGGCAGGGCATTGGC‑GGGGG‑AATCCAGATGCTTTTTATCAAATAAACTC‑CTGGTGTGGCTCTACCGAAAATCGGGCATCG‑GGGTTAATGTTGTAACAAGAGGCGTTTTTGcac                                                                                                                                                                                        <  2:1192860/235‑1 (MQ=255)                                              cGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑TGGTTAAGGTTGTAACAAGAGGCGTATTTGcac                                                                                                                                                                                        <  1:400774/235‑1 (MQ=255)                                              cGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGcac                                                                                                                                                                                        <  1:1681405/235‑1 (MQ=255)                                              cGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGcac                                                                                                                                                                                        <  1:349469/235‑1 (MQ=255)                                               gcgtcacaCCCCAGAAACAAGCCAACGCAAAAATGGCATTCTCCATTCCGTCAGGTACGTTGGTCATGTGGTGACCGGTGACCGCACACAGCGTGGCTACGGGCATCGGGGTGTTACCTCCAGGCAGGACATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGGAAATCGGTCATTG‑GGGTTAAGGTTGTAACAGGAGGCGTATTTGCACACAAt                                                                                                                                                                                   <  2:191129/235‑1 (MQ=255)                                               gCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAAt                                                                                                                                                                                   <  1:1474084/239‑1 (MQ=255)                                                 tCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAAc                                                                                                                                                                                                         <  1:1580385/215‑1 (MQ=255)                                                    acacCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGCCGTATTTGCACACAATAacca                                                                                                                                                                              <  1:334922/239‑1 (MQ=255)                                                        cccAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCAt                                                                                                                                                                                                                            <  1:435611/190‑1 (MQ=255)                                                              aacaacCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGaa                                                                                                                                                                       <  1:522704/236‑1 (MQ=255)                                                              aacaacCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGaa                                                                                                                                                                       <  1:1338547/236‑1 (MQ=255)                                                                 aacCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTc                                                                                                                                                                 <  1:1211026/239‑1 (MQ=255)                                                                  acCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCCAATGCTTTTTTTCAAATAAAATC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTT‑GGGTTAAGGTTGTAACAAAAGGCGGATTTGCACACAATAAACACCGTGGATAGGTCt                                                                                                                                                                >  1:475833/1‑239 (MQ=255)                                                                              aaTGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAt                                                                                                                                                    <  1:1839221/239‑1 (MQ=255)                                                                                   cAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGa                                                                                                                                               <  1:1753062/238‑1 (MQ=255)                                                                                       ctcCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGaa                                                                                                                                                                       <  1:377413/211‑1 (MQ=255)                                                                                         ccATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCAGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATAttt                                                                                                                                        <  1:493418/239‑1 (MQ=255)                                                                                          cATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTc                                                                                                                                                                 <  1:1318539/214‑1 (MQ=255)                                                                                                   aGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGtt                                                                                                                                                                                                                    <  1:1233697/154‑1 (MQ=255)                                                                                                    ggTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTTTCAAATAAAATC‑ATTGGGTCGCTCTCCCCAAAATCGGTCATTG‑GGGTTAAGGGTTTAACAAGAGGCGGATTTTCACACAATAAACACCGTGAATAGGGCTTAAGTAAAACAT‑AAGAAATATTTT‑GGGttttg                                                                                                                              >  1:947150/1‑235 (MQ=255)                                                                                                     gTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCAtt                                                                                                                                                                                                                           <  1:1234042/146‑1 (MQ=255)                                                                                                      tACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAag                                                                                                                                                                                                      <  1:726449/165‑1 (MQ=255)                                                                                                       tcATTGGGCATTGAGTGACCGTTGCCCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCGCTACCGAAAATCGGTCATTG‑GGGTCAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTg                                                                                                                          <  1:1641525/237‑1 (MQ=255)                                                                                                       aCATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGTGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTg                                                                                                                          <  1:975325/238‑1 (MQ=255)                                                                                                             gTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCAGCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAAt                                                                                                                                                                      <  1:592355/190‑1 (MQ=255)                                                                                                              tCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTa                                                                                                                   <  1:1672571/238‑1 (MQ=255)                                                                                                                aTTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGAGG‑GAAACAAAGGCGTTTTTTCCAATTAAATCAATGGTG‑CGCTCTCCCCAAAAACGGTCGTTGTGGGTTAAAG‑TGTGACAAGAAGCAGATCTTCAAACAATAAACAACCTGAATACATGTTAAGAAAAAAAA‑AAAAAAAACTTT‑GGGTTGGTAGTGCTTTTTAAt                                                                                                                 >  2:27225/1‑238 (MQ=255)                                                                                                                  tGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCa                                                                                                              <  1:1036829/239‑1 (MQ=255)                                                                                                                  tGAGTGACAGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGca                                                                                                                                                                                         <  1:2001681/166‑1 (MQ=255)                                                                                                                       gACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGCGGGGGG‑AAACCAGA‑GGTTGTTTTTAAATAAACTG‑ATGGTGGCGTCCTACCGGCAATCCGTGGATT‑GGGTGTAGGGTGAATGAAGAGGCGGATTTACAGACAAAAACCAACGGTACAAGGTGAAAAGGAAAAAAA‑AAAGAAAATTTT‑GGGGTTAGGGTGGTTTTTTATcaaaatca                                                                                                         >  2:1111024/1‑232 (MQ=255)                                                                                                                         ccGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATaa                                                                                                                                                                                 <  1:1679159/167‑1 (MQ=255)                                                                                                                                ccGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTaaaa                                                                                                                                                       <  1:308388/186‑1 (MQ=255)                                                                                                                                    aTGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAAAACAACGCCTTTTTTTCAAAAAAAC‑C‑CTGGTGGTGCCGCCCCGAAAAACCGCCTCTG‑GGGTTAACATTGTTACAAAAGGAGACTTTTCACACAATAACCACCCGGAAAAGAGCTAAAGTAAAAAAA‑AAAGAATATTTGTGGGTTCAG‑CGTATTTTTAATTCTAATTACTgataccttttt                                                                                            >  2:1156955/1‑229 (MQ=255)                                                                                                                                        ggCGTGGCTTCGGGCATCGGGGTGTTACGTCCAGCCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTACCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAg                                                                                         <  2:1473549/237‑1 (MQ=255)                                                                                                                                        aGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAg                                                                                         <  1:350768/238‑1 (MQ=255)                                                                                                                                            tGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATaa                                                                                                                                                                                 <  1:689060/148‑1 (MQ=255)                                                                                                                                                  cGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑GAACCAGATGCTTTTTTTCAAATAAACTC‑CTGGTGGCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGGATTTTCACACAATAACCACCGGGAATAGGTCTAAAGAAAAACAA‑AAGAAATATTTG‑GGGGTTAGTCTGCTTTTTAATCCAAATTACTTGATTTTTTTTAAGCCGTTTAACg                                                                               >  1:833460/1‑238 (MQ=255)                                                                                                                                                  cGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑GAAACAGATGCTTTTTTTTAAATAAACTC‑ATGGTGTCGCTCTCCCGCAAAACGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGGATTTGTACACAATAAACACCGGGAATAGGGCTAAAGTAAAACAT‑AAGAAAAATTTT‑GGGGGTAGTCTTCTTTTTAATCCATATTACTGGATTTTTGTTTAGCCGttttatgg                                                                              >  2:1048898/1‑234 (MQ=255)                                                                                                                                                             gtgtTACGTCCAGGCAGGGCATCGGC‑GGGGG‑CAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTAt                                                                                                                                                                                              <  2:1232013/118‑1 (MQ=255)                                                                                                                                                                ttACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATc                                                                                                                <  1:406903/191‑1 (MQ=255)                                                                                                                                                                    gTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GTGTTAAGGTTGTAACAAGAGGCGTATTTGc                                                                                                                                                                                          <  2:701601/115‑1 (MQ=255)                                                                                                                                                                       caggcaggGCATCGGC‑GGGGG‑GAAACAGATGCTTTTTATCAAATAAAACC‑ATTGTGTCGCTCTCCCGAAAAACCGGCATTG‑GGGGTAAAGTTGTAACAAGAGGCGTATTTGCACACaa                                                                                                                                                                                    >  1:1232013/1‑118 (MQ=255)                                                                                                                                                                        aggcaggGCATCGGC‑GGGGG‑AAAACAGATGCTTTTTATCAAATAAAATC‑ATGGTGTCGCTCTCCCGAAAAACGGTCATTG‑GGGTTAAGGGTGTAACAAGAGGGGTATTTGCACAGAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTT‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAg                                                        >  1:1572150/1‑239 (MQ=255)                                                                                                                                                                          gcaggGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGGCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGa                                                      >  1:606972/1‑239 (MQ=255)                                                                                                                                                                              ggCATCGGC‑GGGGG‑AAAACAGAAGCTTTTTTTCAAAAAAAACC‑ATGGTGTCGCTCTCCCGGAAATCGGTCATTG‑GGGGTAAGGTTGTAACAAGAGGCGTATTTGCACACAAAAac                                                                                                                                                                                >  1:701601/1‑115 (MQ=255)                                                                                                                                                                                cATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTc                                                 <  1:1048898/238‑1 (MQ=255)                                                                                                                                                                                         gggg‑AAACCCGATGCCTTTTATCAAAAAAACTC‑CTGGTGGCGCCCTCCCGCAAAACGGTCATTG‑GGGTGAAAGTTGTAAAAAGAGGCGTATTTTTAAAAAATAAAAACCGTGCATAAGTCTAAAAAAAAAAATAAAGAAAAATTCG‑GGG‑TTATACTTCCTTTTAATCCATATTAATGGATTTTTGTTAAGCCGTTTAACGGCGTTTCCGGGGGAAGAAAAAAAGATATTCAGGCAaaaa                                        >  2:1043110/1‑239 (MQ=255)                                                                                                                                                                                                aCCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCTGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTgcg                                  <  1:294545/239‑1 (MQ=255)                                                                                                                                                                                                aCCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTgcg                                  <  2:1918308/239‑1 (MQ=255)                                                                                                                                                                                                         tttttATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATcc                          <  1:1824775/238‑1 (MQ=255)                                                                                                                                                                                                         tttttATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATcc                          <  1:27225/238‑1 (MQ=255)                                                                                                                                                                                                         tttttATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATcc                          <  1:339897/238‑1 (MQ=255)                                                                                                                                                                                                         tttttATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATcc                          <  2:475833/238‑1 (MQ=255)                                                                                                                                                                                                          ttttATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACAGAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATCCGa                        <  1:772556/239‑1 (MQ=255)                                                                                                                                                                                                          ttttATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATCCg                         >  2:821421/1‑238 (MQ=255)                                                                                                                                                                                                          ttttATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATCCGa                        <  1:444867/239‑1 (MQ=255)                                                                                                                                                                                                            ttATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATCCGACa                      <  1:1043110/239‑1 (MQ=255)                                                                                                                                                                                                                  aaTAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATaa                                                                                                                                                                                 >  2:769754/1‑80 (MQ=255)                                                                                                                                                                                                                  aaTAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATaa                                                                                                                                                                                 <  1:769754/80‑1 (MQ=255)                                                                                                                                                                                                                  aaTAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATCCGACAGTTAt                 >  1:858244/1‑238 (MQ=255)                                                                                                                                                                                                                  aaTAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATCCGACAGTTATg                <  1:437507/239‑1 (MQ=255)                                                                                                                                                                                                                       tagc‑ATGGTGTTGTTTACCCCAAAAACCGTCATTC‑GGATTAAGGTTGTATCAAGTGACGTATTTGGACACAATTACCACCGTGATTAGGTTTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCAGATTAATGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCCGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTGTATCCGACAGTTATGCtgtg           <  2:2093990/236‑1 (MQ=255)                                                                                                                                                                                                                       aCTC‑ATGGTGTCGCTCTCCCGAAAAACGCTCATTG‑GGGTTTAGAATGTAACAACAAGCGTATTTGCACACAATAGCCACTGTGAATCGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAATCTGCTTTTTAAACCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATAGTCAGGCGAAAATGTGCGCTATATCCGACCGTTATGCtgtg           <  2:1884246/239‑1 (MQ=255)                                                                                                                                                                                                                            aTGGTGTCGCTCTCCCGAAAATCTGGCATTT‑GGGTTAAGGTTGTAACAAGAGGCGCATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATCCGACAGTTATGCTGTGTAAg       <  2:1504944/239‑1 (MQ=255)                                                                                                                                                                                                                            aTGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGcac                                                                                                                                                                                        <  2:482390/64‑1 (MQ=255)                                                                                                                                                                                                                            aTGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGcac                                                                                                                                                                                        >  1:482390/1‑64 (MQ=255)                                                                                                                                                                                                                              ggTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTAAGGAGAAAATGTGCGCTATATCCGACAGTTATGCTGTGTAAGCt     >  2:1182947/1‑239 (MQ=255)                                                                                                                                                                                                                                    gCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTAt                                                                                                                                                                                              <  2:2064182/50‑1 (MQ=255)                                                                                                                                                                                                                                    gCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTAt                                                                                                                                                                                              >  1:2064182/1‑50 (MQ=255)                                                                                                                                                                                                                                    gCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATAttt                                                                                                                                        >  2:107898/1‑103 (MQ=255)                                                                                                                                                                                                                                    gCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATAttt                                                                                                                                        <  1:107898/103‑1 (MQ=255)                                                                                                                                                                                                                                    gCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATCCGACAGTTATGCTGTGTAAGCTTAc  >  1:492507/1‑236 (MQ=255)                                                                                                                                                                                                                                             aaaaTCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGa                                                                                                                                               >  2:1162043/1‑87 (MQ=255)                                                                                                                                                                                                                                             aaaaTCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGa                                                                                                                                               <  1:1162043/87‑1 (MQ=255)                                                                                                                                                                                                                                                aTCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTgcg                                  <  2:1269860/192‑1 (MQ=255)                                                                                                                                                                                                                                                aTCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTgcg                                  >  1:1269860/1‑192 (MQ=255)                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                  TAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGG‑AAACCAGATGCTTTTTATCAAATAAACTC‑ATGGTGTCGCTCTCCCGAAAATCGGTCATTG‑GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACAT‑AAGAAATATTTG‑GGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGTTCCAGGGGCAGGAAAAAAGGATATTCAGGAGAAAATGTGCGCTATATCCGACAGTTATGCTGTGTAAGCTTAC  >  NC_007779/4446639‑4447098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑