New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	781703 =	73 (1.010)	3 (0.040)	3/512	8.2	4.7%	intergenic (+51/‑382)	lysQ/nadA	tRNA‑Lys/quinolinate synthase, subunit A
	?	NC_000913	2521314 =	52 (0.760)					noncoding (62/76 nt)	lysV	tRNA‑Lys
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTAC  >  NC_000913/2521035‑2521596                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                            cAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCTGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGCTGAATTTTAATTA‑ATTTGTCGCCGGTTCGAATCGTTcaccac                                                                                                                                                                                                                                                                                     >  1:542046/1‑288 (MQ=255)      aaTTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACccac                                                                                                                                                                                                                                                                                 <  1:501643/287‑1 (MQ=255)      aaTTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACccac                                                                                                                                                                                                                                                                                 <  1:423680/287‑1 (MQ=255)               gTGGGTGATTACCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGGCATCACCAACCACTTTATCGCCAGAGAAATTTCTGGTAAACAGTTGAAGTCCGCAAGTGGTTGATTAGCACAGCCGGGAGAGCACCGCCATTACAAGCCGGGGGTCGGCGGGTGGATGACGTCACCACCCAAAACTGCGGGACGTTAGCTGAGTAGGTAGAGAAGTTGACGTATACACAGATTGG‑AGCAGGTGCGGATCCGGCACGGACCACAAGTGaaaaaa                                                                                                                                                                                                                                                                      >  2:160510/1‑289 (MQ=16)                 ggttGATTATCTCAGCTCGGATAGCACCTCCCTTACCAGGAGGTGGTCTGCGTTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAg                                                                                                                                                                                                                                                                    <  1:335589/286‑1 (MQ=255)                          gCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCGCGCCAGATAAATGTCGTGTAAAAATGTGAAGTACCGAAGTGGGTTATCAGCTCAGCTGGGAGCGCACCTCACTTACAAGGAGGGGCTCGGCAGTTCGATCTCGTCACCACCCACCATTTTAGCTCGTTAGACCAGGCGGTAGGGCAGGTGACTTTGCAGCA‑ATTGATCGGAGGTTCGCATACTGCACGACCCGACGCTGAAAAAAAgtacaccaac                                                                                                                                                                                                                                                           >  2:111754/1‑280 (MQ=21)                              aGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCa                                                                                                                                                                                                                                                                                         <  1:67257/255‑1 (MQ=255)                                cTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTTGCAGGTTCGAATCCTGCACGACCCACCAATTTACAAAAGCGACCTCCAGgcgca                                                                                                                                                                                                                                                     >  1:336915/1‑288 (MQ=255)                                     agagCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTCAAGGCGCtttttt                                                                                                                                                                                                                                                >  1:688972/1‑289 (MQ=255)                                                         aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAACATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGTGAGCACCTCCCTTACAAGCAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCCGGGTCGTTCGCTCATTTGGTAGAGCAGTTGTCTTTTAATCA‑ATTGGTCGCCGGTTCGCATCCTGCCCGACCCACCAATGTCACAAAGCAGCCTAAATGCACTTTCTTACATCCTGCCATACTccact                                                                                                                                                                                                                            >  2:469744/1‑285 (MQ=21)                                                         aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGGTGGTAGAGCAGTTGACTTTTAATCA‑ATTGTTCGTAGGTTCGACTCCTGCACGACCCACCGACTTACAAAACAGCCCTACCGGCGCTTTTTTACTATCTGCGATACTCACAg                                                                                                                                                                                                                            >  2:158038/1‑289 (MQ=25)                                                         aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTGTTCATCA‑ATTGGTCGAAGGTTCGAGTCCTGCACGACCCACCAATGTAAAAAAGACCCCTAAAGGCACTGTTTAACTATCTGAGATACGCaaat                                                                                                                                                                                                                            >  2:718393/1‑288 (MQ=25)                                                         aggGGGTCGGCGGTTCGATCCCGTCATCACCACCCCCTTTTTCGCCAGGTAAAGTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCaa                                                                                                                                                                                                                              <  1:416678/287‑1 (MQ=255)                                                              gTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGAGTAGCTCAGCTGTGAGAGCACCTCCCTTACCAGGAGGGGGTCGGCGGTTCGATCTCGGCATCACCCACCACTTCGGCTCGTTAGCGCAGTTGGTCGTGCAGTTGACTTTTAATCA‑CTTCGTGGCAGGTTCGACTCCTGAAAGACTCACCACTGTAACACAGCGCCCACAAGGCGATCATTTACTATCTGCGAGACGCaacacatcg                                                                                                                                                                                                                       >  2:730370/1‑282 (MQ=25)                                                                      ttCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGACGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCACAGTTGGTAGAGCAGTTGCCTTCTAATCA‑ATTGGTCGCAGGTTCGAATCCTGAACGAACCACCAACGTAAAAAAGCGCCCTAAGGGCACATTCTTACTACATGCAATACGCAAAGTATCGAAccgtca                                                                                                                                                                                                               >  2:7356/1‑285 (MQ=21)                                                                       tCGATCCCGTCATCACCCACCAATGTCTCGCTAGCGAGATTTCTTGTAAAAGTGTGAAGGACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTgcag                                                                                                                                                                                                              <  1:586161/289‑1 (MQ=255)                                                                                                     ccAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCCGGTTTGATTTGAGCGCAGCGACACAACg                                                                                                                                                                                >  1:449266/1‑289 (MQ=255)                                                                                                        gCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTACCGGCGCTTTTTTACTATCTGCGATACTCAAAGCTTCGCACCTGCAGCAGGTTTGCGTTGAGCGCAGCGCCCCAACGGa                                                                                                                                                                              >  1:210740/1‑288 (MQ=255)                                                                                                                   tGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAgcg                                                                                                                                                                                                                                                                  >  2:291163/1‑193 (MQ=255)                                                                                                                   tGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAgcg                                                                                                                                                                                                                                                                  <  1:291163/193‑1 (MQ=255)                                                                                                                      aaaatcgggAAGTTCGGAAGGGGGTGATTAGTTCAGCTGGGAGAGAACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGAc                                                                                                                                                               <  2:341993/281‑1 (MQ=255)                                                                                                                                               taTTAGCTCCGCTGGGAGAGCACCTCCCTGACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAg                                                                                                                                       <  1:54409/287‑1 (MQ=255)                                                                                                                                                      tCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGTAACCGCCCGCGACGCCGGCCCGAAGGCCGAGCGGAGCGCGTCacacc                                                                                                                                >  2:46010/1‑284 (MQ=255)                                                                                                                                                      tCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCATGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGATTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTAGCGGCGACGGCCCGCAGGGCAGTCGAAGCTAGTCATCCt                                                                                                                                >  1:339567/1‑288 (MQ=255)                                                                                                                                                         gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGcc                                                                                                                             >  1:662816/1‑287 (MQ=255)                                                                                                                                                          cTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGCAACAACGGAGCCGCTCGCGGCGACGGCCCGCAGGGCGAGCGCAGCGAGTCCTCCTGcgc                                                                                                                            >  1:477544/1‑286 (MQ=255)                                                                                                                                                                   cACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGCAAGGAGAGCGAAGCGAGTCATCCTGCGCGACA‑CACCaa                                                                                                                 >  1:201229/1‑289 (MQ=255)                                                                                                                                                                                aggaggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGCGCGAAGCGAGTAATCCTGCACCACC‑CACCAATGTAAAAAAgcg                                                                                                     >  1:606829/1‑288 (MQ=255)                                                                                                                                                                                aggaggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATTTAAAAAAgcg                                                                                                     >  1:425339/1‑288 (MQ=255)                                                                                                                                                                                   aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGGGCAAAGAGAGGCAACCTGCCCGACC‑CACCACTGTAAAAAAACAccca                                                                                                 >  2:519488/1‑288 (MQ=255)                                                                                                                                                                                   aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCt                                                                                                 >  1:626150/1‑289 (MQ=255)                                                                                                                                                                                   aggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGAGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGACCt                                                                                                 >  1:324198/1‑289 (MQ=255)                                                                                                                                                                                     ggggTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCAACCAATGTAAACAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTACAGCCGGTTTGAGTTGCGCCCAGCGAAACAACTGAACCGCTCCCCGACACCGCCCGACGGCCGCGCCAAGCTAGTCAGCCTACCCGACCACACC‑ATGTcaaaaccacccacaa                                                                                               >  2:247648/1‑279 (MQ=14)                                                                                                                                                                                       ggTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGCTTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCCCGACC‑CACCAAAGTAACAAAGCGCCCCAAAg                                                                                             >  2:732057/1‑289 (MQ=255)                                                                                                                                                                                       ggTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAg                                                                                             >  1:265611/1‑289 (MQ=255)                                                                                                                                                                                       ggTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGAAC‑CACCAATCTAAAAAAGCGCCCTAAAg                                                                                             >  1:31795/1‑289 (MQ=255)                                                                                                                                                                                        gTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTgcag                                                                                                                                                                                                              >  1:655401/1‑176 (MQ=255)                                                                                                                                                                                        gTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTgcag                                                                                                                                                                                                              <  2:655401/176‑1 (MQ=255)                                                                                                                                                                                         gcggcggTTCGATCCCGTCAGCACCCACCACTGCGGGTCGTTAGCTCCGTTGGTAGAGCAGTTGACTTTTAAACA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACAAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAgg                                                                                            <  1:594803/287‑1 (MQ=255)                                                                                                                                                                                          cggcggTTCAATCCCGTCATCCCCCACCAGCTCGGGTCGTTCGCTCAGTTGGTAGAGCAGTTGACGTTTAATCA‑ATGGGTCGCAGGTTCGAACCCTGCACGACCAACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGgcg                                                                                          <  2:230016/289‑1 (MQ=255)                                                                                                                                                                                                                    ccacTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGaa                                                                <  1:469744/289‑1 (MQ=39)                                                                                                                                                                                                                             ggcGTTACCTCAGTTGGGAGTGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGAACGACCCACAAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTg                                                        <  1:718393/286‑1 (MQ=255)                                                                                                                                                                                                                               cGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGAt                                                      <  1:7356/288‑1 (MQ=40)                                                                                                                                                                                                                                 ttagcctagtgtgTAGAGCAGTGGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAGGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATgcg                                                   <  2:324198/277‑1 (MQ=255)                                                                                                                                                                                                                                   aGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACAACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCt                                                 <  1:158038/289‑1 (MQ=255)                                                                                                                                                                                                                                              ttaggaaGTTGCCTTTTAAGTA‑ATTGGTCGCAGGTTCGAACCCTGCACGACCCACCATGGTAAAAAAGTGCCCTAAAGGCGCTTTGTTACTATCTGCGATACTCAAAGATTCGCACCTGGAGCGGGTTGTAGTTGCGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCa                                       <  2:495185/282‑1 (MQ=14)                                                                                                                                                                                                                                                  gCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGACGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCACTGTAAAAAAGCGCCCTAAAGGCGCTCTTTTGCTATCTGCGATTTGCGACATTTACTGATGCGCTTCACTTAGCATacc                                   >  2:548749/1‑287 (MQ=255)                                                                                                                                                                                                                                                      ttGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGCTTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTAt                              >  1:48351/1‑289 (MQ=255)                                                                                                                                                                                                                                                      ttGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAAAAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCGTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGAGCTTTTTTGCTATCTTCGATTTGAGAAATTGCATGATGAGTTTCACTTGGAAGCATACTAt                              >  1:373220/1‑289 (MQ=14)                                                                                                                                                                                                                                                                  cA‑AGTGGTAGCAGTTTCGAATACTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACAATCTGGGATACGCAAAGATTCGAGCCTGCAGCAGGGTTGAGTTGAGCGCAGGGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTc                  <  1:422915/289‑1 (MQ=17)                                                                                                                                                                                                                                                                        ggTGGCAGGTTCGAATCCTGCACGAACAACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGCGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGtc             <  1:160510/289‑1 (MQ=255)                                                                                                                                                                                                                                                                          actcAGGTTAGAATCCTACACGACCCACCAATGTAAAAAAGCGCCCTAATGTCGCTTGTTTACTATCTGGGATACTCAAAGGTTCGAACATGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGGGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGtctc           <  1:358869/286‑1 (MQ=18)                                                                                                                                                                                                                                                                           cGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGtctc           <  1:111754/288‑1 (MQ=255)                                                                                                                                                                                                                                                                                gTTCAAATCCTGAAAGACCCAACAAGGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTAGCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCAcc     <  2:626150/289‑1 (MQ=255)                                                                                                                                                                                                                                                                                   cGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTAc  <  1:443283/289‑1 (MQ=255)                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                            CAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCA‑ATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACC‑CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTAC  >  NC_000913/2521035‑2521596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.