Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 2344215 | 2344591 | 377 | 34 [21] | [27] 28 | yfaL/nrdA | adhesin/ribonucleoside‑diphosphate reductase 1, alpha subunit |
GCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTG‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTTGATGAATAATATCAGTGCGTCATAATTCAAGTTAATAACCTTCAGGGATATCA > NC_000913/2343926‑2344337 | gCAAAAATACGTCCCCACCGCTGGCCTTATTGGTCCTATCCGAAAAAACCATCCCATGCCCAGCAGCTATACTCCAGTCCTGCGTAATGCCAGAAAGGCTTTGCCTGCTGGCCTGACAGCTCGCTTTGACATCATAGCCCTGGCATGAAACAGTG‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa < 2:536316/289‑1 (MQ=255) tACGGCCCCACCTCTGGCTTTATTGGTCATATCCGAAAAAACCCGCCATTGCCCATCAGCGATACTCCAGTCCTTCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTG‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACg < 1:34035/289‑1 (MQ=255) cGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTG‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGat < 1:559846/289‑1 (MQ=255) cACCGCTGGCTTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTG‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGaa < 1:466978/289‑1 (MQ=255) acccATTGCCCAGCCGCCATTCTCCAGGTCTGCGTAATGCCTGCAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTT‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCaa < 2:452488/287‑1 (MQ=255) ccATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTG‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTAttt < 1:491078/289‑1 (MQ=255) aCTCCAGTCCTGCGTAATGCCTGAAAAGCTTTTCCTGCTTGCCTGACCACTCGCTTTGACATCATATCCCTGGCATGAATCAGTG‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTAttt < 1:188471/289‑1 (MQ=255) cTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTG‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa < 1:589315/218‑1 (MQ=255) cTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTG‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATAATCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa > 2:589315/1‑218 (MQ=255) ccTGCGTAATGCCTGAAAGGCGTTGCCTGCTGGCCTGACAACTCGCTTTTACATCATATCCCTGGCATGAATCAGTG‑ACCGCCGCGACACCGTTTGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTTGATGaat < 1:414462/288‑1 (MQ=255) tAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTG‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGAGTAGTTAATCGCATTATACGATATGGAAGATATTTCTTTTGTAAATTGTTCAAACCGGTGCAATGGCTATTTTTTATTTATTTGATGAATAGTAACa > 2:414462/1‑289 (MQ=255) gCTGTGCCTTCTTGCCTGACAACTCTCTTTGAAATCATATCCCTAGCAGGAATCAGTG‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTTGATGAATAATATCAGTGCGTCATAAtt < 2:487061/289‑1 (MQ=255) gttggacgtactaCTAGCTTTGACAAAGTAACCCTGGATTGAAT‑AGTGAACCGCGTGGACACCGATAGAAGAGAAAAGAGATGAAATCATTGACTGGAGTAAAGAGAAATAATCCTTTCGTATAAAGATAATCCGCATAGTATTCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGGTATGGAATATCTTTCTTTTGTAAGTTGTTCAACCCGGTGCAATGGCTATTTTGTTATAATTTGATGAATAATATCAGTGCGTCATAATTAAAGTtaat < 2:525561/277‑1 (MQ=255) cgccgcGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa > 1:727247/1‑132 (MQ=255) cgccgcGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa < 2:727247/132‑1 (MQ=255) cgcgACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTTGATGAATAATATCAGTGCGTCATAATTCAAGTTAATAACCTCCAGGGATATCa > 1:62082/1‑252 (MQ=255) cGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAAATAAATACTCCATGCGGAGAAAGATAATCCGCAGATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa < 1:672652/121‑1 (MQ=255) gaAAAGAGATGCAATCATTGACGGGCGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCCAACCATCATTTTCTATAAGACGGCGTATTTACTCGCATTACACGatc > 2:672652/1‑120 (MQ=255) aGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa < 1:654655/86‑1 (MQ=255) aGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa > 2:654655/1‑86 (MQ=255) aaaTACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTTGATGAATAATATCAGTGCGTCATAATTCAAGTTAATAACCtt < 1:77544/189‑1 (MQ=255) aaaTACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTTGATGAATAATATCAGTGCGTCATAATTCAAGTTAATAACCtt > 2:77544/1‑189 (MQ=255) aaTACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa > 1:79207/1‑76 (MQ=255) aaTACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa < 1:583392/76‑1 (MQ=255) aaTACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa > 2:583392/1‑76 (MQ=255) aaTACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCa < 2:79207/76‑1 (MQ=255) tGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACg < 2:262856/74‑1 (MQ=255) tGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACg > 1:262856/1‑74 (MQ=255) tAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTTGATGaat < 2:80646/140‑1 (MQ=255) tAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTTGATGaat > 1:80646/1‑140 (MQ=255) aCCATCATTTTCTATAAGACGGCGTATTTAATCGCa < 1:113474/36‑1 (MQ=255) catTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATAtct > 2:224260/1‑51 (MQ=255) catTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATAtct < 1:224260/51‑1 (MQ=255) tCTATAAGACGGCGTATTTAATCGCATTATACGata > 2:113474/1‑36 (MQ=255) | GCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTG‑ACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAATTGTTCAACCCGGTGCAATGGCTATTTTGTTATTATTTGATGAATAATATCAGTGCGTCATAATTCAAGTTAATAACCTTCAGGGATATCA > NC_000913/2343926‑2344337 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |