Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 3,622,299 | G→A | T1036T (ACG→ACA) | rhsB → | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,622,299 | 0 | G | A | 98.5% | 156.4 / NA | 65 | T1036T (ACG→ACA) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (43/21); minor base C (0/1); total (43/22) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.38e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CGCACGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACGATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAAC > NC_000913/3622063‑3622584 | cGCAAGGGTGATGAGCGGACTCACCGGTACCATGACGACAGTCAGCACCGGGTGGTGCACTACACGCGGACACAATATGAAGGGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCa < 1:88350/289‑1 (MQ=9) aCGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGCCGATTTATCAGCCGGGGAGCTCCACg > 1:529940/1‑288 (MQ=14) cGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGGCGGGGACCGGCTGACCACAATACAGAACGACAGGAGCCGCAGCCAGACGATTTAACAGCCGGGGAGCTTCACGcc > 1:324768/1‑289 (MQ=9) gggCGGACTCACCGGTACCATTACGACAGTCAGAACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCGTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACtcatc < 1:114643/286‑1 (MQ=14) gACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGCCGGCGGCCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCACCCGGGGAGCTTCACGCCCCTCACCCggggc > 1:15465/1‑287 (MQ=9) gACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGATGACCACACTACACAACGACAGGGGCCGCATCCAGACGCTTTAACAGCCGGGGAGCTGCACGCCACACATCAGGGTc > 1:389963/1‑289 (MQ=255) ttACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAAGCAGCAACCAGACGATTTATCAGCCGGGGAGCTTCACGCCACCAATCAGGGTCGGAACTGCCACCGGt > 1:90142/1‑289 (MQ=12) gTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGGCCTGACGGGCTGGATGTCGCTGTCCCGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGAAAGGAGCCGCAGCAAGACGATTTAACAGCCGGGGAGCTACACGACCATCACCAGGGTCGAAAAGGCCCCAGGTGCGCTggg > 2:100754/1‑288 (MQ=11) tCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCg > 1:578319/1‑289 (MQ=21) aGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACAGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGGCGGGGAGCTTCACGCCACTAATCAGGGGCGAACCTGCCACAGGGGAGCTGGCgga > 1:389998/1‑287 (MQ=255) cGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGCCGATTTATCCGCCCGGGAGCTTCACCCCCCTCATCAGGGTTGAAACTGCCACCGGTGAGCTGGCGAAAACg > 1:40873/1‑288 (MQ=12) cTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCCGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAgc > 1:95824/1‑289 (MQ=21) tGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACCGCGACCGGCTGACCACAATACCGAACGACAGGAGCCGCACCCAGACGATTTATCCGCCGGGGACGTTCCCCCCCCGCATCAGGGTCGGAAATGCCCCCGGGGAGCTGGCGAAAACC‑Cacgcgcg > 2:347265/1‑283 (MQ=11) gCACTACACGCGGACACAATATGAAAGGCCGCGGGGCGAAAGTCGCCATCTTTACGACCCGCTGGGCCGCAGGGGGGCAAAACGGGTGGGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGcgccg < 2:196749/288‑1 (MQ=255) cacGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGGTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTGCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CCGCGCCGCAGCCTg > 1:603836/1‑289 (MQ=21) gcgGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGCCGCTTTATCAGCCGGGGAGCTTCACGCCACTCCCCCGGGTCGAACCTGCCCCCGGTTGGCTGGCGAAAACG‑CAgcccacaagccttgcc > 2:453338/1‑275 (MQ=11) ggACAAAATATGAAGAGCCGCTGGTCGAAAGGCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGa < 1:197118/289‑1 (MQ=21) cacaATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATg < 1:439835/288‑1 (MQ=21) caATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCCGACCACAATAAAGAACGACAAGAGCCGCATCCAGACGAATTATAAGCCGGGGAGCTTCACGCCACTCATCAGGGCCGAAACTGCCACCGGTGAGCGGCCGAAAACG‑CAGCCCCCCAGACCCGCGGATGcc > 1:313160/1‑288 (MQ=11) gagCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCAATCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAAAG‑CAGCCGCGCAGCCTGGCGGATGCCCTTtagcaa > 1:317971/1‑287 (MQ=255) gCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGGCGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCACCAGGGTTGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CACAGCCCCAGCCTGGCGGAGGGCATTcagaactc > 2:304543/1‑283 (MQ=11) gCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGACCGACAGGAGCCGCATCCAGACGAGTTATCAGCCGGGGAGCTTCACGCCACCCATCAGGGTCGAAACTGCCACCGGTGAGCCGGCGAAAACG‑CCGCCCCCGCGCCTGGCGGGCGCCCTGcaggaacc > 2:304988/1‑283 (MQ=11) gCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTcc > 1:86621/1‑289 (MQ=25) cTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGGGCCGCAGCCTGGCGGAGGCCACTCAGCAGTCcggcg > 1:280281/1‑289 (MQ=255) cTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGATGACCCCAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGTGGTTCAAGCCCCCCCACAGGGGCGAAACTGCCACCGTTGCGCTCGCGCAAACG‑CAGCCCCCCAGACTGGCGGATGCCCTAcagcagcctcggg > 2:254920/1‑282 (MQ=11) gtcgctagagtgtggACCCGCGGGGCGGAATGGCGGCAAGACGGGTGTGGCGGCGTGAACGGGACCCGACGGGCGGGAGGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACgg < 2:69401/275‑1 (MQ=11) tctgtcttccgagcccGCTGGGCCGGGGGGTGGCAAACCGGGTGGGGCGGCGGGAACGGGACCGGACGGGCTGGATGGCGCCGGAACGCAAACCGCAAGTGACCTGGTACGGCTGGGGCGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTgg < 2:102934/276‑1 (MQ=11) gcgaTCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTgg < 1:680332/286‑1 (MQ=25) gCTATCTTTACGACCCGCTGGGCCGCAGGGTGGAAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATTTCGCTGTCCCGGAAACCGCAATTGCCCCGGTACGGCTGGGACGGCGACCGGCCGACCACAATACAGACCGACAGGAGCCGCCACCAGACGCTTTATCAGCCGGGGAGCTTCCCGCCAACCATCAGGCTCGACAATGACACCGGTGACCGGGAGCAAACGCCGGCGCCACGGCC‑GGCGGATGCACCTCAGCAGTgcggcggcggcgcaggtg > 2:489326/1‑279 (MQ=11) ttACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGtgtg < 1:453338/289‑1 (MQ=25) ttACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGAAGtgtg > 1:261255/1‑289 (MQ=25) aCCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGAATTATCAGCCGGGGAGCTTCACGCCACTCCTCAGGGGCGAAACTGCCACCGGTTAGCTGGCGAACACG‑CAGCGCCGCAGCCTGGAGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGCTGGCAgtgtcgag > 1:685545/1‑283 (MQ=255) ccGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGCAGACGGTGGCAGGGTGGTGTTc > 1:231728/1‑288 (MQ=25) gCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACACTACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACCCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCCGGCGGATGCCCCTCAGCCGTCCGGGGGCGAAGACGGCGGCGGGGGGGTGTTccc > 2:269636/1‑288 (MQ=11) gCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCCGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAAGGTCGAAACTGCCACCGGTGAGCTGGCGACACCG‑CAGCGACGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTTccc > 1:141580/1‑288 (MQ=255) gCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGc < 2:383066/198‑1 (MQ=37) gCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGc > 1:383066/1‑198 (MQ=37) cGCAGGGTGGCAAAACGGGTGTGTCGGGGGGAACGGAACCTGACGGGCGAGATGGCTCTGACACGGAAACCGCAAGTGGCCTGGTACGGCGGGGACGGCACCCGGCTGACCACAATCCAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCGGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTg < 1:34865/288‑1 (MQ=11) cAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGGGTGGTGTTCCCGCCGGTGCTg > 1:28223/1‑289 (MQ=25) cGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGAGTTATCAGCCGGGGAGCTTAACGCCACTCATCAGGGTCGAAACTGCCACCGGGGAGCTGGCGAAAACG‑CAGCGCCCAAGCCAGGCGGACGCCCTTCAGCCGGGCGGCGGCGAAGACGGTGGCGGTGTGGTGTGCCCGCCGGTGCTGGCGCGGagcatcg > 2:411237/1‑283 (MQ=11) tgtgGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTATCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCg > 1:326263/1‑289 (MQ=25) ccTGCCGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCt < 1:553128/288‑1 (MQ=25) aCGGGGTGGATGTCGCTGTCACGGAAACCGCAAGTGACCGGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCt < 1:413527/288‑1 (MQ=25) gCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCg > 1:605596/1‑289 (MQ=25) gCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCg > 1:689895/1‑289 (MQ=25) gCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGCTCCGGCCGGTGCTGGTGCAGAGGCTCGACCGGCCGGAAAGTGAAATCCTGGCTGACCg > 1:439098/1‑289 (MQ=255) tGGATGCGGCGGCCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGAGTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCgg < 2:261255/288‑1 (MQ=255) tGGAGGTCGCAGTAACGGAAAACGCAAGTGACCTGGGACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCGGACGATGTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg < 1:59420/289‑1 (MQ=255) gCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCCCCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCCGATGCGGTGGCAGTGTGGTGGTCCCCCCCGGGCTGGTGCAGTTGCCCGGCCGGCCGGACAGTGAGATCCTGGCGTACCGGGtgcgggag > 2:617473/1‑289 (MQ=11) tCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGCCAGGAGCCGCATCCAGACGATTTATCAGCCGGGGCGCTTCACGCCACTCATCAGGGTCGAACCTGCCACCGGTGCGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGCTGCCCTTCAGCAGTCCGGCGGCGAAGGCGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGGGCAGATGCTCGACCGGCCGGACGGTGACATCCTGGATGACCGGGCGGGCGAGGaaa > 2:337681/1‑289 (MQ=11) tCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:249385/1‑289 (MQ=25) agccggaatgagccTGGTACGGCTTGGGCGGAGCGCGGCGGACCGCAATGAGGACGGGCGGGAGCCGCAGCCGGACGAGTTATCAGCCGGGGGGCTGCAGGCCAGTGTTCAGGGTGGGAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGGGCCGCAGCCTGGCGGGTGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGGGTGAGGAAAGccgccg < 2:313160/277‑1 (MQ=11) aaGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCgctggc < 1:602753/288‑1 (MQ=25) cTGGTACGGCTGGGGCGGCGCCCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCg < 1:269636/289‑1 (MQ=25) cTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTAGAAACTGCCACCGGTGAGCTGGAGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGTCGAAGACGGTGGCAGTGTGGTGTTACAGCAGGTGCTGGTGCAGATGCTCGACCGTCTGGAAGGTGAACTCCTGGCTGCCGGGGTGAGTGAGGAGAGCCGCCGCTGGCTGGAATc > 2:152241/1‑288 (MQ=11) ggaaggacgggACGGGGACCGGCTGACCACAAGCAAGAACGCCAGGGGCCGCAGCCAGACGATTTAGCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGGGAGCGGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTg < 2:86621/280‑1 (MQ=11) gTACGGCGGGGACGGCGACCGGCTGACCACCATACGGAACGACAGGAGCCGCATCCAGGCGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTg < 1:23188/288‑1 (MQ=255) cTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTg > 1:21754/1‑289 (MQ=25) gACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGCCCGGGGGAGTGAGGAAAGCCGCCGCTTGCTGGCCTCGTGCTGCCTgcggg > 2:498408/1‑285 (MQ=255) gACGGCGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGCGCTGGTGCAGGTGCACGACCGGCAGGAAAGGGAAATCCTGGCTGACCGGGGGAGTGGGGAAAGCCGGCGGCGGCTGGCATGGTGGCGCCTGGCCg > 2:205465/1‑289 (MQ=11) cGACCGGCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGGCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTTGTGCAGATGCTCGACCGACTGGACAGTGAAACCCTGGCTGCACGGGTGAGCGGGGAAAGCCGCCGCTGCCTGTGGCGTTGCGGCCTGCCCGGGGAg > 2:382866/1‑289 (MQ=11) gCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAACGTGAAATCCTGGCTGACCGGGTGCGTGAGGAACGCCGACGCTGGCTGGCATCGTGCCGCCTGACCggggggacgag > 1:169547/1‑281 (MQ=255) gCTGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGGGCTGGTGCAGATGCCAGACCGGCTGGAAAGTGAAATCCTGGCTGACAGGGTGAGTGAGGAAAGCTGCCGCTGGCTGGCATCGGGCGGCGTGACCGTGGGGCCGagg > 2:650885/1‑287 (MQ=11) tGACCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTCCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCa < 1:411237/289‑1 (MQ=25) aCCACAATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCaaa < 1:304543/289‑1 (MQ=25) cacaATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAAc < 1:498408/289‑1 (MQ=25) | CGCACGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACGATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACG‑CAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAAC > NC_000913/3622063‑3622584 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |