New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3589138	40 (0.590)	3 (0.040)	3/534	7.5	6.9%	coding (43/1071 nt)	ugpC	sn‑glycerol‑3‑phosphate ABC transporter ATPase
	?	NC_000913	3589143 =	41 (0.610)					coding (38/1071 nt)	ugpC	sn‑glycerol‑3‑phosphate ABC transporter ATPase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGC  >  NC_000913/3588855‑3589427                                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                              tgctTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATccc                                                                                                                                                                                                                                                                                               <  1:368731/289‑1 (MQ=255)     tGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCt                                                                                                                                                                                                                                                                                           <  1:309135/289‑1 (MQ=255)       cccATGTCGCGGATCTTCAGCCCCCACGCTATGTTTCCTATGACCCGCAGTTGCTGCTAGAGCGCGTGGTTCTGGCACACCATGGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTCCGGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACTGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCttt                                                                                                                                                                                                                                                                                         <  2:25730/289‑1 (MQ=255)                          gCCCCCACGCCCGTTTTTCTTCGACACTCCTCTGCGGATAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTCTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAAttt                                                                                                                                                                                                                                                                      <  2:184954/289‑1 (MQ=255)                            cccaACGCCAGTTTGTCGTCGAGATGCATCTGCGGCTAAAGCGGGTAGTTCTGACACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCACTCACGCGCTGGTCGTTGAACCAGATATCGCCGTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCa                                                                                                                                                                                                                                                                    <  2:374467/289‑1 (MQ=255)                                       tttttctgtcacccTCAGATGCTGATAAAGAGCGCAGTTCTGGGACACCATCGCAATCCCGCGATCTGTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATc                                                                                                                                                                                                                                                         <  2:332418/276‑1 (MQ=255)                                          ttcttcGACACTCATATGCGGATAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTa                                                                                                                                                                                                                                                      <  1:383818/289‑1 (MQ=255)                                          tacttcGACGCCCATATGAGGATAAAGCGCTTAGTTCGGGAACACCATCGCAAGCCCGCGAGCTTTTGGCACCATTTCCGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTa                                                                                                                                                                                                                                                      <  1:525581/287‑1 (MQ=255)                                               cGACACTCATATGCGGATAAAAGCCGTAGTTCTGGAACACCATCCCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATAACGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTtct                                                                                                                                                                                                                                                 <  2:32678/289‑1 (MQ=255)                                                               aTAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATACATTCGCCATCCGCCACATCAAGGGTCAGCGGTATAATGACCGAGGTTTCACCATCCCAGGCTGTGGTATCGTCCTGTTATTTCACTCCTGGCATTCTATTTCGCACTTTTGCCCAGGc                                                                                                                                                                                                                                  >  2:425232/1‑288 (MQ=255)                                                                tAAAACGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCcg                                                                                                                                                                                                                                <  1:361292/289‑1 (MQ=255)                                                                            cacTGGAACACCATCGTACTCCTCCTCTCTGTCTGCGCGCTTTCACTCGCGCGCCGGTCTGTGAGCCAGATGACCCCTGCTGTCACCGGCTCCCGCCGGGCGACCATGCGCAGCAGCGTCGACTTCACGCAGCCAGACGGCCCGACCATCAAGCTAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGGCCAGGCCGCGCACGAAGGCa                                                                                                                                                                                                                    <  2:428126/287‑1 (MQ=255)                                                                                  cacacccagccagccccGCGATCTGTTGTCTCCCCGTCAGTCACGCGCTGGTCGTTGAACCAGATTTCGCCTTCGGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCAGCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGc                                                                                                                                                                                                              <  2:587109/275‑1 (MQ=255)                                                                                         tCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTa                                                                                                                                                                                                      <  1:113466/289‑1 (MQ=255)                                                                                                 ccGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATc                                                                                                                                                                                              >  1:646217/1‑289 (MQ=255)                                                                                                    cgATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCCT‑CACTAAAACAATcacc                                                                                                                                                                                           >  1:53293/1‑289 (MQ=255)                                                                                                    cgATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGCAACCGGTTTAATGACCTGGGTTTTCACATCCCAGTTTTTGGTTACTGACTGTAATTTCACTCCTGCCATCTTCTTTCTCCCTTTCGACCAGGCCGCGGACGCCAGCACCCTGCCTCCACTaaccaaccac                                                                                                                                                                                             >  2:533846/1‑280 (MQ=255)                                                                                                     gATCGTTTGGCTCCAGTTCAGTCACGCGCTGGTCGTTGACCCAGAGATCGCCTGCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACAGCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATcacca                                                                                                                                                                                          <  1:486460/289‑1 (MQ=255)                                                                                                              gCTCCCGTTCCGTCACGCGCTGGGCGTTGATCCAGATATCGCCTTCGCTAACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGGCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGa                                                                                                                                                                                 <  2:646217/289‑1 (MQ=255)                                                                                                               cgacatgtcacacACGCGCTTGTCGTTGTTCCAGCTATCCCCTTCCGCCACCCCCTCCAGCCCCGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGAt                                                                                                                                                                                <  2:53293/277‑1 (MQ=255)                                                                                                               cTCCATTTCAGGCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGAt                                                                                                                                                                                <  1:26001/289‑1 (MQ=255)                                                                                                                 ccATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCCAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTCCTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAATGCACCCTGCCT‑CACTTAATACATCACCACCGGAGGGAtca                                                                                                                                                                              >  2:324033/1‑287 (MQ=255)                                                                                                                   aTTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTCAAACAATCACCACCGGAGGGATAAGc                                                                                                                                                                            >  1:216942/1‑289 (MQ=255)                                                                                                                            aCGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCCCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CAATAAAACAATCACCACCCGAAGGATAAGCGTTaacaac                                                                                                                                                                   >  1:239096/1‑289 (MQ=255)                                                                                                                                                   atCTCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCa                                                                                                                                            <  1:558397/289‑1 (MQ=255)                                                                                                                                                               cccccGCCCCAGCCCGCCCACGTAGCTCAGCAGCTTCGATTTCCCCAAGCCAGACGGCCCGACCATCACTATAAACTCGCCATCCGCCACATCAATGGTCAGCGGTTTAATTACCTGGGTTTTGCCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGcc                                                                                                                                <  2:132236/287‑1 (MQ=255)                                                                                                                                                                  ccGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTc                                                                                                                             <  1:243023/289‑1 (MQ=255)                                                                                                                                                                                cacccctGCGCAGCATCGTCGTCTTGCCGCGGCCGGACGGCCCGACCATTACGATAAATTCGTCATCCGCCACATCAAGGGTCAGCGGTTTAATTACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGatca                                                                                                               <  2:89572/283‑1 (MQ=255)                                                                                                                                                                                  aCCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACAATCACTGAGTTCCATTCCGGGGTTCCTTCGCCTGTACCGatcag                                                                                                              >  1:112595/1‑287 (MQ=255)                                                                                                                                                                                             cagcGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTA‑‑‑‑CCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGc                                                                                                                                                              <  2:198445/225‑1 (MQ=255)                                                                                                                                                                                             cagcGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTA‑‑‑‑CCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGc                                                                                                                                                              >  1:198445/1‑225 (MQ=255)                                                                                                                                                                                                                    aCGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGGGGTGCCTCCTCCTGTACCGATCATCCCTTTGTTCCCTCCCACGGTGATGCCGAGCTcc                                                                            >  1:688006/1‑288 (MQ=255)                                                                                                                                                                                                                        cccGACCCTCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACAt                                                                        <  1:490001/288‑1 (MQ=255)                                                                                                                                                                                                                        cccGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACAt                                                                        <  1:324033/288‑1 (MQ=255)                                                                                                                                                                                                                          cGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGACAACATCACTTAGTTCCATTCCGTGGTGCCTTCTCCTGTAGCCATCAACCCTTTGCTCCACGCCCCGGTGGTGGCgacgaccaccgccg                                                                     >  2:281599/1‑277 (MQ=255)                                                                                                                                                                                                                                                   ctcaccaTCAAGTGTCACCGGTTTTAGTACCTGGGTTTTACCATCCCAGCTTTTGGTGACTGCCTTTAAGTGCAGTCCTGCCACCTTCTTTCTCACCACCGACCAGGCCGCGCACGAAGGCAGGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATTGCCACCATCACTGAGTTCCATGCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATa                                            <  2:511897/284‑1 (MQ=255)                                                                                                                                                                                                                                                   cGCCACATCAATGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTTCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATa                                            <  1:422055/289‑1 (MQ=255)                                                                                                                                                                                                                                                                   aGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAg                            >  1:490557/1‑289 (MQ=255)                                                                                                                                                                                                                                                                        tttAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATaa                        <  1:460759/288‑1 (MQ=255)                                                                                                                                                                                                                                                                          tAATGCCCTTGGTTTTACCCTCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAgg                     <  1:425232/289‑1 (MQ=255)                                                                                                                                                                                                                                                                          tAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATGTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCGCCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATGCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAgg                     <  1:597456/289‑1 (MQ=255)                                                                                                                                                                                                                                                                          tAATGACCTGGCTTTTCCCCTCCCTGCTTTTGGTTACGGCCTGTAATTTCAGTCCAGCCATCTTATTCCTCACAACAGACCAGGCGGCGCACGAAGGCAGGCAGCAT‑CACTAAAACCATCACCACCGGAGGGATAGGCGTTAACAACATCGCCACCATCACTGAGTTACATGCCGTGGTGCCTACGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAgg                     <  2:239096/289‑1 (MQ=255)                                                                                                                                                                                                                                                                                              tCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCCCCTGTAGCGATCATCCCTTTGATCCCTGCTCCGGTGGTGCCGAGATCCACATCGGTAATAATAAACAACGGCCACACTTACTGATACCGCACGTAGAGAAAGGTGATAACAAACAgcgcacc  >  1:292381/1‑285 (MQ=255)                                                                                                                                                                                                                                                                                                ccAGCTTTTGGTTACTGCCTGTAATTGCAGTCCTGCCATCTTATTTCTCACTATCCACCAGGCCGCGCACGAAGGCACGCTTCAT‑CACTAAAACAATCACCACCGGAGGGATACGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGcgccgc  <  1:552792/286‑1 (MQ=255)                                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                              TGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCAT‑CACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCCACCATCACTGAGTTCCATTCCGTGGTGCCTTCGCCTGTAGCGATCATCCCTTTGATCCCTGCCACGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGC  >  NC_000913/3588855‑3589427

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.