New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 668008 =56 (0.670)3 (0.040) 3/526 9.8 4.8% coding (210/1902 nt) mrdA penicillin‑binding protein 2, transpeptidase involved in peptidoglycan synthesis
?NC_000913 668030 = 63 (0.750)coding (188/1902 nt) mrdA penicillin‑binding protein 2, transpeptidase involved in peptidoglycan synthesis
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTAACTTCGACACCCGGAAAACGGTACTGATTGACGGCAAAGCGAGCTACTTGTACTTCGGTCAGGTTAGTTTTCACCGGAATAGAGGTGAAACGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCA  >  NC_000913/667742‑668312
                                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                            
ttAACTTCGACACCCGGAAAACGGTACTGATTGACGGCAAAGCGAGCTACTTGTACTTCGGTCAGGTTAGTTTTCACCGGAATAGAGGTGAAACGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGACAg                                                                                                                                                                                                                                                                                              >  2:554026/1‑289 (MQ=255)
    cTTCGAAACCCGGAAAACGGGACGGATTGACGGCAAAGCGAGCTACTTGTACTTCGGTCAGTTTAGTTTGCACCGGAATAGAGGTGAAACGGGGTGAACGTGCGCGCGCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCAc                                                                                                                                                                                                                                                                                          <  2:510314/289‑1 (MQ=255)
                 aaaaCGGTAATGATTGAAGGCAAAGCGAGCTACTTGTACTTCGGTCAGGTTAGTTTTCACCGGAATAGAGGTGAAACGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCg                                                                                                                                                                                                                                                                              <  2:258824/288‑1 (MQ=255)
                   aaCGGTACTGATTGACGGCAAAGCGAGCTACTTGTACTTCGGTCAGGTTAGTTTTCACCGGAATAGAGGTGAAACGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGtt                                                                                                                                                                                                                                                                           <  1:202340/289‑1 (MQ=255)
                         aCTGAGTGAAGGCAAAGCGGGCTACTTGTACTTCGGGCAGGTTAGTTTTCAACGGAATAGAGGTGAAACGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCAt                                                                                                                                                                                                                                                                      <  2:508779/288‑1 (MQ=255)
                             agtGAAGGCAAAGGGAGTGTGTTGGAATTCGGTCAGGTTAGTTTGCACCGGAATAGGGGTGAAACGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCAGTCAGTTCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTagag                                                                                                                                                                                                                                                                 <  2:123210/287‑1 (MQ=255)
                              ttGACGGCAAAGCGAGCTACTTGTACTTCGGTCAGGTTAGTTTTCACCGGAATAGAGGTGAAACGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGc                                                                                                                                                                                                                                                                <  1:147185/289‑1 (MQ=255)
                              tggACGGGCAAGCGAGCTATGTGTAGTTCGTGCAGGTTCTTTTTCACCGGAATAGAGGTTAAAGGGTGGGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGc                                                                                                                                                                                                                                                                <  2:456009/287‑1 (MQ=255)
                                       aaGCGAGCTACTTTTACTTCGGTCAGGTTAGTTTTCACCGGAATAGAGGTGAAACGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGt                                                                                                                                                                                                                                                       <  1:346276/289‑1 (MQ=255)
                                             gCTACTTGTACTTCGGTCAGGTTAGTTTTCACCGGAATAGAGGTGAAACGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAAATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCACCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTCGTCgg                                                                                                                                                                                                                                                 >  1:323655/1‑289 (MQ=255)
                                                                      ttttCACCGGAGTAGTGGTGAAACGTTGTGAACGTGCGCGCCCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCTTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATtata                                                                                                                                                                                                                        <  1:544396/289‑1 (MQ=255)
                                                                       tttCACCGGAATAGAGGTGAAACGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATtata                                                                                                                                                                                                                        <  1:181847/288‑1 (MQ=255)
                                                                           aCCGGAATAGAGGTGAAACGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGGGATAGGCACCAGGTTAATGCGGTTTTCATTAAGGCGGGTCTGGTCGTCGGTAAAGCGAACCATGTGCAGCtttaaacggt                                                                                                                                                                                                                   >  2:507962/1‑281 (MQ=255)
                                                                                          aaaCGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCCGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTACTGCGGGTTTCATTATAGCGGGTCTGGTAGTCGGTACAGCGAACAATTTGCAGATTATACAGGTTGGCGTTAAGCACg                                                                                                                                                                                                    >  1:560775/1‑288 (MQ=255)
                                                                                                  tgAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCa                                                                                                                                                                                                                               <  1:582364/254‑1 (MQ=255)
                                                                                                  tgAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCa                                                                                                                                                                                                                               >  2:582364/1‑254 (MQ=255)
                                                                                                  tgAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGCcag                                                                                                                                                                                           >  1:162266/1‑288 (MQ=255)
                                                                                                           gcgtgttttcCGGAATGAAGAAATATCGTCATCGGTCAGATCTAACCGGCTGTGCAAAGCGTCCAGCGGTTGCGGCACGTTTTCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGGGCGGTGGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAAt                                                                                                                                                                                  <  2:422070/282‑1 (MQ=255)
                                                                                                                    tCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGGCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAg                                                                                                                                                                        <  1:568698/289‑1 (MQ=255)
                                                                                                                                   tgcgctctCGGTGAAATCTCCCCCGGTGCGCAAACGCTCCCGCGTTGTCTGCAAGTTATCGACTTTCCCCGGCATCATTGCTATCGGGGTGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCgg                                                                                                                                                         <  2:323655/282‑1 (MQ=255)
                                                                                                                                   ctcgtactCGGTCAGATCTACCGCGCTGCGGAAAGCGTCCAGCGTGTGCTGCACGTTATCGACTTTCTCCGTCATCATTTCTATCTTGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATATGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCgg                                                                                                                                                         <  1:498745/282‑1 (MQ=255)
                                                                                                                                    tCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCa                                                                                                                                                                                                                               <  1:433437/220‑1 (MQ=255)
                                                                                                                                    tCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCa                                                                                                                                                                                                                               >  2:433437/1‑220 (MQ=255)
                                                                                                                                         aTCGGTCAGATCTACCACGCCGCGCAAAGCGTCCAGCGTTTGGTTCACGTTATCGACTTTCTCCCGCATCATTTCTATCTGGTAGATAGGGCGGGTGAGGGCCAGAGGGATACCGTTACGATCGTAGGTAATGCCGCGGCTGGGCGCGCGCGGGCCCCGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAATCGGTCAAGCGAAACATTTGCCGATTATACAGGTTGGCGGAAAGGCACCCGGTACAGCGGAAAATCCCCAAAAAGGCAAACAGCACCCGgcagcac                                                                                                                                                   >  2:79822/1‑284 (MQ=255)
                                                                                                                                                 gATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATCGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCCCCAGCTTAATGCGGTTTTCATTAGAGCTGGTATGGTAGTCGGTAAAGCGAACCATTTGCAGATGATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCACAATCACACAAAAGGCGACCAGAGCACGGCCCACAAACcgcga                                                                                                                                           >  1:368117/1‑288 (MQ=255)
                                                                                                                                                     tACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGa                                                                                                                                        >  1:65218/1‑288 (MQ=255)
                                                                                                                                                      aCCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGAct                                                                                                                                      <  1:554026/289‑1 (MQ=255)
                                                                                                                                                            cTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCa                                                                                                                                                                                                                               <  2:371079/196‑1 (MQ=255)
                                                                                                                                                            cTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCa                                                                                                                                                                                                                               >  1:371079/1‑196 (MQ=255)
                                                                                                                                                                         ccAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGGGCGGAATGTGCCGTATAGTCGCGaaa                                                                                                                   >  1:541863/1‑289 (MQ=255)
                                                                                                                                                                             ggttggcgtcACGTTATCGACGTTCGCCGGCATCATTTCTATCTGGTGGATAGTGCGGTGGAGGGCCAGGGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGGTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAagag                                                                                                               <  2:449971/280‑1 (MQ=255)
                                                                                                                                                                                    tgcACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGt                                                                                                         <  1:79822/288‑1 (MQ=255)
                                                                                                                                                                                      cACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGt                                                                                                      >  1:725035/1‑289 (MQ=255)
                                                                                                                                                                                                  tttcttctgctgcatTTCAGTCTGGTGGAGAGGGGGGTGGAGGTCCGTGGGGTGACCGGTACGGTCGTAGGTAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCAGTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGc                                                                                          <  2:541863/277‑1 (MQ=255)
                                                                                                                                                                                                                   acagcTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGc                                                                          <  1:523197/284‑1 (MQ=255)
                                                                                                                                                                                                                      tCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCCAAGCTcc                                                                       >  2:708568/1‑288 (MQ=255)
                                                                                                                                                                                                                           tAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATtata                                                                                                                                                                                                                        >  2:170879/1‑140 (MQ=255)
                                                                                                                                                                                                                           tAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATtata                                                                                                                                                                                                                        <  1:170879/140‑1 (MQ=255)
                                                                                                                                                                                                                                 ggggggTGGAGGGCGAGAGGGATACAGTTACGATGGTAGAGAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGGTTTCATTAGAGCGCGTCTGGTAGTCGGTAAAGCGAACAAGTTGCAGATTATACAGGGTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACGCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTAtcactca                                                            <  1:681689/284‑1 (MQ=255)
                                                                                                                                                                                                                                 gTGCGGTGGGGGGCCCGAGGGAAACCGGTACGATCGTAGATAAGGGCTCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGGTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTAtcactcac                                                           <  2:162266/289‑1 (MQ=255)
                                                                                                                                                                                                                                  tGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGGAACGAGGTCTGTAAGTTCATCCGCTGCGTTTTCTACTCAACGCCCCCTTAacacctgt                                                           >  2:523197/1‑284 (MQ=255)
                                                                                                                                                                                                                                  tGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACg                                                          >  2:325088/1‑289 (MQ=255)
                                                                                                                                                                                                                                  tGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGGATAGTCGCGACAAGGGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCTCg                                                          >  1:133039/1‑289 (MQ=255)
                                                                                                                                                                                                                                   gCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTAtcactcac                                                           <  1:708568/287‑1 (MQ=255)
                                                                                                                                                                                                                                    cGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGGTGGCGATAAGCACGCCGGACAGCAGCAAAATCCCCAAAAAGGCGACCAGTGCCCGGCGCACAAACAACGCGGACTCTGCCGTATAGTCGCGAAAAGAGAGCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCATTATCACTCACGGt                                                        >  1:731710/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 gagGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGCCTCTGCCGTATCGTCGCGAAAAGAGTTCGGTAGTTTCATCCTCTGCGTTTTCTACTCACAGCTCCATTATCACTACCTGTGATCAGGAcggtt                                           >  2:507354/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  ggggATCCCGGTAGGGTCGTAGAGAAGGCAGCGGCTGGGCGCGATAGGCACCAGCTGAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtggtt                                           <  2:725035/287‑1 (MQ=255)
                                                                                                                                                                                                                                                       tACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTAtcactca                                                            >  1:125497/1‑266 (MQ=255)
                                                                                                                                                                                                                                                       tACCGTTACGATCGTAGATAATGCCGCGGCGGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTAtcactca                                                            <  2:125497/266‑1 (MQ=255)
                                                                                                                                                                                                                                                            ttACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCa                                                                                                                                                                                                                                                                                           >  1:10989/1‑40 (MQ=255)
                                                                                                                                                                                                                                                            ttACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCACAGCTCCCTTATAACTCACGGTGATAAGGAAGGTTGGGGGTGATGc                                >  1:370368/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               cGATCGGAGCTATGGCCCAGGCTGGGGGCGATAGGGCCCCGCTCAATGCTGTTTTCATTAGGGCGGGTCTGGTATGCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATCAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTcc                             <  2:133039/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tAGATAATGGCGGGGCTGGGCGCGATAGGACCCAGCTTAATTCGGTTTGCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGcc                        <  1:662755/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                       gATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGCGTTCTGTAGGTTCATCCGCTGCGTTTTCTACTCAAAGCCCCCTTATCCCTCCCGGTGATAATGATGGTTGGTGGTGATGCTCCACGCCCgg                     >  2:83400/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            tGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAAc                                                                                                                                                <  2:190630/161‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAAc                                                                                                                                                >  1:190630/1‑161 (MQ=255)
                                                                                                                                                                                                                                                                            tGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTTGCGAAAAGAGCTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGCTGGTTGGTGGTGTTGCTCCACGCCCGGTAccg                >  1:123161/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                            tGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCACAGCTCCCTTATCACTACCGGTGATAAGGCTGGTTGTTGGTGATGCTCCACGCCCGGTAccg                >  2:268964/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                            tGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAg                >  1:383341/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            tGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCCCCCGGCGCACAACCAGCCCGGACTCCGCCGTATAGTCGCGAAACGAGTTCTGTAGCTTCCTCCGCTGCGTTTTCTACTCCAAGCCTCCTTATCACTCACGGTTCTACTTCTTGTTGGTGGTCATGCTCCTCTCCCGGtcccg                >  2:319707/1‑285 (MQ=255)
                                                                                                                                                                                                                                                                                       ggCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCg                                                                                              <  1:350735/200‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       ggCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATACg                                                                                              >  2:350735/1‑200 (MQ=255)
                                                                                                                                                                                                                                                                                          gcgATCGGGACCAGCGTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGAcc   <  2:383341/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                          gccattggCACCCGCTTAATTCGGTTTGCATTAGAGCGGGTCTTGTAGTCGGTAAAACGCACAATTTGCAGATTATACAGGTTGGCGCTAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCa  <  1:452975/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                            
TTAACTTCGACACCCGGAAAACGGTACTGATTGACGGCAAAGCGAGCTACTTGTACTTCGGTCAGGTTAGTTTTCACCGGAATAGAGGTGAAACGGTGTGAACGTGCGCGCTCTTTTCGGAATGCAGCAATATCGTCATCGGTCAGATCTACCACGCTGCGCAAAGCGTCCAGCGTTTGCTGCACGTTATCGACTTTCTCCGGCATCATTTCTATCTGGTAGATAGTGCGGTTGAGGGCCAGAGGGATACCGTTACGATCGTAGATAATGCCGCGGCTGGGCGCGATAGGCACCAGCTTAATGCGGTTTTCATTAGAGCGGGTCTGGTAGTCGGTAAAGCGAACAATTTGCAGATTATACAGGTTGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCA  >  NC_000913/667742‑668312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.