New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1562837 =	47 (0.770)	4 (0.070)	3/546	NT	8.2%	coding (240/582 nt)	ddpX	D‑ala‑D‑ala dipeptidase, Zn‑dependent
	?	NC_000913	1562864 =	44 (0.740)					coding (213/582 nt)	ddpX	D‑ala‑D‑ala dipeptidase, Zn‑dependent

CTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAAAACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTGTATAAGACAAAAATTGCTGCGCTTTCCGCTTATGCAGATCTCATGCCATGCCGGGATAAGCGC  >  NC_000913/1562567‑1563151                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                catgagatctgcataagcggaaagcgcagcaatttttgtcttatacaggaaccgtttatgtcggataccaccgaactggttgatttagccgtaatcttccctgatctggagatcgaattgaaatacgcctgcgctgataacatcacaggtaaagctatttatcagcaagcgcgttgtctgttacacaaggatgcgattaccgcgctggcgaaaagtatcagcatcgcccagctgtcagggttacaactggtgatttacgatgcgtatcgcCCACAACATCGCCTGTGCTTGTTGTggg                                                                                                                                                                                                                                                                                                 >  1:52279‑M1/271‑298 (MQ=255)       tAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAAAACCGCCACCAGTCATTATCGCATGCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATAc                                                                                                                                                                                                                                                                                           <  1:126530/298‑1 (MQ=255)          ttCGAAGTGCCACCATTCGCTGGAGATACCGACAAAACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCa                                                                                                                                                                                                                                                                                        >  1:473309/1‑298 (MQ=255)               aagcggaaagcgcaggaatttttgtcttatacaggaaccgtttatgtcggataccaccgaactggttgatttagccgtaatcttccctgatctggagatcgaattgaagtacgcctgcgctgataacatcacaggtaaagctatttatcagcaagcgcgttgtctgttacacaaggatgcgattaccgcgctggcgaaaagtatcagcatcgcccagctgtcagggttacaactggtgatttacgatgcgtatcgcCCACAACATCGCCTGTGCTTGTTGTggg                                                                                                                                                                                                                                                                                                 >  2:416637‑M1/257‑284 (MQ=255)                              tGGAGATACCGACAAAACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAAc                                                                                                                                                                                                                                                                   <  1:39683/299‑1 (MQ=255)                               ggAGAGACCGACAAAACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTTCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATAGCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAAcc                                                                                                                                                                                                                                                                  <  1:168789/299‑1 (MQ=255)                                    tACCGACAAAACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGa                                                                                                                                                                                                                                                              <  1:477835/298‑1 (MQ=255)                                              aCCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACCTCAACAACATCTTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTCTTGTGGGCCATACGCCTCGTAAATCACCACTTGTAAccc                                                                                                                                                                                                                                                                 >  2:428576/1‑285 (MQ=255)                                                               tCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGcc                                                                                                                                                                                                                                  >  1:85901/1‑299 (MQ=255)                                                               tCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATAAACAACATATTGCGGGTCCGGGCAGGCTTGCCAACACATCGCCTGGGCTTGTTGTGGGCGATACGCATCGTAACTCACCAGTTGTAACCCTGACAGCTGGGCCATg                                                                                                                                                                                                                                                 >  2:270199/1‑284 (MQ=255)                                                                    ttCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAgccc                                                                                                                                                                                                                             >  1:397923/1‑297 (MQ=255)                                                                       aGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACACCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCCACAGTTGTAACCCTGACAGCTGGGCGATGCTGCTACTTTTCGCCATCGCGGt                                                                                                                                                                                                                          >  1:437398/1‑299 (MQ=255)                                                                       aGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCAAGACGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTACCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGt                                                                                                                                                                                                                          >  1:455619/1‑299 (MQ=255)                                                                        cgaactggttgatttagccgtaatcttccctgatctggagatcgaattgaaatacgcctgcgctgataacatcacaggtaaagctatttatcagcaagcgcgttgtctgttacacaaggatgcgattaccgcgctggcgaaaagtatcagcatcgcccagctgtcagggttacaactggtgatttacgatgcgtatcgcCCACAACAAGCACAGGCGATGTTGTGGGCGATACGCCTCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCCGCccggag                                                                                                                                                                                                                         <  1:524403‑M1/100‑3 (MQ=255)                                                                         cAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTaa                                                                                                                                                                                                                        >  1:280514/1‑299 (MQ=255)                                                                              gCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCCCAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCa                                                                                                                                                                                                                                 >  2:335769/1‑285 (MQ=255)                                                                                   atttagccgtaatcttccctgagctggagatcgaatttaaaaacgcctgcgctgataacatcacaggtaaagcgatttatcagcaagcgcgttggctgttacacaaggatgcgattaccgcgctggcgaaaagtagcagcatcgcccagctgtcagggttacaactggtgatttacgatgcgtatcgcCAACAACAAGCACAGGCGATGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGcgcg                                                                                                                                                                                                                            >  2:457840‑M1/189‑285 (MQ=255)                                                                                              ggcgggcgGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTTCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGa                                                                                                                                                                                                    <  1:192515/298‑1 (MQ=255)                                                                                                           gAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGa                                                                                                                                                                                                    >  2:185309/1‑285 (MQ=255)                                                                                                             aGGGGGATAGGCAGGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGAc                                                                                                                                                                                                   <  2:24256/284‑1 (MQ=255)                                                                                                              gggTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATAGCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACa                                                                                                                                                                                                  <  2:247261/284‑1 (MQ=255)                                                                                                                  gATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAAt                                                                                                                                                                                <  1:357506/298‑1 (MQ=255)                                                                                                                                  cTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGc                                                                                                                                                                             <  2:74723/285‑1 (MQ=255)                                                                                                                                                  aaCCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTa                                                                                                                                                             <  2:60292/285‑1 (MQ=255)                                                                                                                                                        gcgcCCATAGCGAGGATGTTCCCGTGCGCATCAGGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAgc                                                                                                                                                        <  2:413447/284‑1 (MQ=255)                                                                                                                                                              atatCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGAt                                                                                                                                   <  1:383024/299‑1 (MQ=255)                                                                                                                                                                atCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGAtct                                                                                                                                 <  1:560229/299‑1 (MQ=255)                                                                                                                                                                    aGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTc                                                                                                                                           <  2:239355/285‑1 (MQ=255)                                                                                                                                                                                       caCGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAGTTCGATCTCCAGATCAg                                                                                                                        <  2:360482/285‑1 (MQ=255)                                                                                                                                                                                        aCGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTa                                                                                                         >  1:96564/1‑299 (MQ=255)                                                                                                                                                                                         cGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTaa                                                                                                        >  1:111091/1‑299 (MQ=255)                                                                                                                                                                                                tCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGACACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGAAAATCACCAGTTGGAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGAATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGACGATTACGGCTAAATCAAc                                                                                                  >  1:583685/1‑298 (MQ=255)                                                                                                                                                                                                      ctccgggcgggcgaaaagtatcagcatcgcccagctgtcagggttacaactggtgatttacgaggcgtatcgcccacaacatcgcctgtgcttgttgtggGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCg                                                                                           <  1:524403‑M2/199‑1 (MQ=255)                                                                                                                                                                                                      cGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCAGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGGGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTATGGCTAAATCAACCAgctag                                                                                           >  1:336492/1‑295 (MQ=255)                                                                                                                                                                                                       gATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGCTACGCCTCGTCAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGATTTACCTGTGATGTTATCAGCGCAGGCGTATTACAATTCGCACTCCAGCTAAGGGAAGATTACGGCaaa                                                                                                        >  2:249791/1‑285 (MQ=255)                                                                                                                                                                                                        aTCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTaaa                                                                                                       >  2:220782/1‑285 (MQ=255)                                                                                                                                                                                                         cgcgctggcgaaaagtatcagcatcgcccagctgtcagggttacaactggtgatttacgatgcgtatcgcccacaacatcgcctgtgcttgttgttgGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGCTACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGCCAACGCGCTTGCTGATAAATCGCTTTACCTGTGATGTTATCAGCGCAGGCGTTTTTAAATTCGATCTCCAGCTCAGGGAAGATTACGGCTAAAt                                                                                                      >  2:457840‑M2/98‑285 (MQ=255)                                                                                                                                                                                                                 ccACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGCTCGGTGGTATccc                                                                                 >  1:541796/1‑297 (MQ=255)                                                                                                                                                                                                                       cTGTGATTAGAACCGACCGTCACATCAACAACATAGTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCggtg                                                                                        <  2:84436/285‑1 (MQ=255)                                                                                                                                                                                                                          tcttccgatctgaccgTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACgg                                                                       <  1:47873/288‑1 (MQ=255)                                                                                                                                                                                                                              tAGTACCGACCGTCACATCAACAACATTTTGCGGGTCTGGGCAGGCTTGCCACATCATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTAATAACCCTGACAGCTGGGCGATGCTGATACTTTTAGCCAGCGCGGTAATCGCATACTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTcc                                                                   <  1:128839/299‑1 (MQ=255)                                                                                                                                                                                                                                   ccgaccgTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTGtat                                                              >  1:109935/1‑299 (MQ=255)                                                                                                                                                                                                                                    cgaccgTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTGtata                                                             <  1:305880/299‑1 (MQ=255)                                                                                                                                                                                                                                      accgTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAAc                                                                         >  2:41171/1‑285 (MQ=255)                                                                                                                                                                                                                                              aTCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTg                                                                 >  2:455656/1‑285 (MQ=255)                                                                                                                                                                                                                                              aTCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGGAAATCACCAGTTGTAACCCTGACAGATGGGCGATGCAGATACTTTTCGCCAGCGCGGTAATAGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTAACAGCGCAGGCGTATTTCAATTCGATCTCCTGATCAGGGCAGATTACGGCTAAATCAACCAGTTCGGTGGTATGTGACATCAACGGTTCCTg                                                                 >  2:352454/1‑285 (MQ=255)                                                                                                                                                                                                                                               tCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTAACTTCGCTCTCCAGATCAGGGAAGATTACGGCCAAATCAACCAGTTACGTGGTATCCGACCTAAACGGTTCCTGt                                                                >  2:188590/1‑285 (MQ=255)                                                                                                                                                                                                                                                caacaaCATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGAGAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTGTATAAGACAAAAATtg                                                 <  1:322667/299‑1 (MQ=255)                                                                                                                                                                                                                                                       atatTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTGTATAAGACAAAAATTGCTGCGCt                                          >  1:284530/1‑299 (MQ=255)                                                                                                                                                                                                                                                                   tGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTGTATAAGACAAAAATTGCTGCGCTTTCCGCTTATGc                              <  1:250843/299‑1 (MQ=255)                                                                                                                                                                                                                                                                              cccacaacaagcacaggcgatgttgtggGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTGTATAAGACAAAAATTGCTGCGCTTTCCGCTTATGCAGATCTcatg                    >  1:52279‑M2/29‑298 (MQ=255)                                                                                                                                                                                                                                                                              cccacaacaagcacaggcgatgttgtggGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTACTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTGTATAAGACAAAAATTCCTGCGCTTTCCGCtt                                  >  2:416637‑M2/29‑284 (MQ=255)                                                                                                                                                                                                                                                                                CACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTGTATAAGACAAAAATTGCTGCGCTTTCCGCTTAt                                >  2:97335‑M1/1‑284 (MQ=255)                                                                                                                                                                                                                                                                                 ACAACAACCCCTGTGCCGGTTGCGGGCGATACGCATCGCAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCACTTCGATCTCCAGATCAGGGACGATTCCGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTGTATAAGACAAAAATTGCTGCGCTTTCCGCtt                                  <  2:293053‑M1/281‑1 (MQ=255)                                                                                                                                                                                                                                                                                                cTTGTGGTGGGCGATACGCATCATAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATGGCAGCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTGTATAAGACAAAAATTGCTGCGCTTTCCGCTTATGCAGATCTCATGCCATGCCGGGATAAgcgc  <  1:214709/298‑1 (MQ=255)                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                CTGGGGTAATTCGAAGTGCCACCATTCGCTGGAGATACCGACAAAACCGCCACCAGTCATTATCGCATTCAGCAACAGCCGATTGCGCTGAGCGGCGGGCGGGACGGAAGGGTGATAGGCATGGGAGCGCTCGTGCATTTCATCGAACCCTGCGCCCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGATGTTATCAGCGCAGGCGTATTTCAATTCGATCTCCAGATCAGGGAAGATTACGGCTAAATCAACCAGTTCGGTGGTATCCGACATAAACGGTTCCTGTATAAGACAAAAATTGCTGCGCTTTCCGCTTATGCAGATCTCATGCCATGCCGGGATAAGCGC  >  NC_000913/1562567‑1563151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.