New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	555285 =	39 (0.920)	3 (0.070)	3/520	5.2	7.2%	coding (675/1386 nt)	cysS	cysteinyl‑tRNA synthetase
	?	NC_000913	= 555281	39 (0.940)					coding (671/1386 nt)	cysS	cysteinyl‑tRNA synthetase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCGTGCGTTACTTCCTGATGTCGGGCCACTATCGCAGCCAGTTGAACTACAGCGAAGAGAACCTGAAGCAGGCGCGTG  >  NC_000913/555020‑555550                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                              cGGACAGCTGCGACGTGATGTTCCACGTCCCCACCGATCCACCTTGTGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCTAATGGACTTCGTTCTGTGGAAGATTTCGAAAGAGGGCGAACCGCGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAg                                                                                                                                                                                                                                                                 <  1:170930/276‑1 (MQ=255) cGGACAACGGCGCCGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCa                                                                                                                                                                                                                                                                  <  1:62104/275‑1 (MQ=255) cGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAg                                                                                                                                                                                                                                                                 >  1:312103/1‑276 (MQ=255)   gACCACGTCTACGTGATTGTCGACGGTCCGACCTATCCAACGTATGGCCTGCTGTCGCGTCAGTATCTCGACCATCTGCAGGCAGGCGCGCGCTTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGTGCGAACCGAGCTTGCCGTCTCCGTGGGTCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGTTAACCACTTTGATATCCACGGCGGCGGTTCAGAc                                                                                                                                                                                                                                                               <  1:56095/276‑1 (MQ=255)   gACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGTCCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACAGAGCTGGCCGTCTCCGGGGGGGGCGGGTCGGCCTGGCTGGCACCTTGAATGTTCGGCCAGGAACTGCAAGCAGCTGGGTAACAACTTTGATCTCCAcggcggggggtacgac                                                                                                                                                                                                                                                               >  2:319528/1‑269 (MQ=255)   gACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGGGCTGGCCGGCGTCGTTGGGCGCGGGTCGTCCTGGCTGGCCGCTTTCAGGTTAGGCCATGCACTGCAGGACGCTTGCTCACCACCTTGAAACCCCCGGCGGTGGTGCAgc                                                                                                                                                                                                                                                                >  2:320910/1‑274 (MQ=255)                         aCGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCacgaaa                                                                                                                                                                                                                                         >  1:229628/1‑276 (MQ=255)                          cggcccGACCGATCCAACTTATGGCGTCGTGTCGCGTCAGGATCTCGACCAGCTTCAGGCAGGCGCGCGCGTTGACTTGGTCGACGAAAAACGCAACCCAAGTGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCacgaaa                                                                                                                                                                                                                                         <  1:392449/272‑1 (MQ=255)                                     agccAACTTATGGCGGACTGGCGCGTCAGGAGCGCGACCAGCGGCAGGCAGGCGCGCGCGTTGACGGGGTCGACGACAAACGCAGCCCAATGGACTTCGTTCGGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGGCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATcgcg                                                                                                                                                                                                                              <  2:128757/273‑1 (MQ=255)                                               tGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCt                                                                                                                                                                                                                    <  1:46946/275‑1 (MQ=255)                                                      cTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGGTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCTCCCCACGAAACAGAAATCGCGCAGTCCACCTGTGCCCat                                                                                                                                                                                                            >  2:257434/1‑276 (MQ=255)                                                       tGTCGCGTCGGGATCTCGACCAGCTGCAGGCAGGCGCGGGGGTTGACGTGGTCGACGGCAAACGCAACCCAATGGACTTCGTTGTGTGGAGGATGTCGAAAGAGGGCGAACCGGGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCatg                                                                                                                                                                                                           <  2:340144/276‑1 (MQ=255)                                                              tCAGGATCTCGTCCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTc                                                                                                                                                                                                     <  1:319528/275‑1 (MQ=255)                                                                   agctcGACCAGCTGCAGGCAGGCGCGCGCGTTGACGAGGTCGACGAAAAACGCAACCCAATGGACTTCGTGCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTAt                                                                                                                                                                                                <  1:380380/273‑1 (MQ=255)                                                                   aTCTCGACCAGGTGCAGGGAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGTACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTAt                                                                                                                                                                                                <  1:324999/275‑1 (MQ=255)                                                                         aCCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCGCCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCatgatg                                                                                                                                                                                                        >  1:220986/1‑261 (MQ=255)                                                                            aGCGGCGGGCATGCGCGCGCGTTGGCGTGGTCGGCGACAAACGCAACCCAATTGACTTCGTTCTGTGGAAGATGTCGAAAGGGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTc                                                                                                                                                                                                     <  2:220986/261‑1 (MQ=255)                                                                              cTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCCGCTGGGTAACCACTTTGATATCCA‑‑‑CGGCGGTTCAGACCTGATGTTCCCGCACCCCGAAAACGAACTCGCGCAGTCCCCCTGTGCCCATGATGGTCAGTACGGGAACTACTGGGTg                                                                                                                                                                                 >  2:75446/1‑276 (MQ=255)                                                                              cTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAg                                                                                                                                                                                                   >  1:260043/1‑261 (MQ=255)                                                                                 caggcaggCGGGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTAt                                                                                                                                                                                                <  2:260043/261‑1 (MQ=255)                                                                                                       tGGTCGACGACGAAGGCAACCAAAGGGACGTGATGCTGGGGAAGAGGTGGACAGCGGGGTAACCGGGCTGTACGTCTCCGTGGGGCGTGGGTAGTCCTGGCTGGCACATTGAATGGTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGAGCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTg                                                                                                                                                           <  2:198691/276‑1 (MQ=255)                                                                                                        ggTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGCGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGATGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGCATGTGAACTACTGGATTCACTCGGGGATGGTGATGGTTGa                                                                                                                                                          >  1:308982/1‑276 (MQ=255)                                                                                                                              aTGGACGTCGTGCAGTGGAAGGTGGCGAAAGAGGGGGAACCACGCTGGCCGGCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCg                                                                                                                                    <  1:330136/276‑1 (MQ=255)                                                                                                                                    ttCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGACGATGTCCAAATCGCTGGGt                                                                                                                              >  1:337364/1‑276 (MQ=255)                                                                                                                                     tggTTCTGTGGGAGATGGCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTGTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACTAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGt                                                                                                                              <  1:266696/273‑1 (MQ=255)                                                                                                                                      ggTTCGGGGGAAGAGGGCGAAAGAGGGCGACCCGAGCTGGCCGTCTCCGGGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGGTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTaa                                                                                                                            <  2:98391/275‑1 (MQ=255)                                                                                                                                        tccTGTGGAGGATGTCGAATGAGGGCGCACCGGGTTGGCCGTCTCGTTGGGGCGTGGGTCGTCCTGGCTGGTCCATTTAATGTTCGGCAATGAACTGCAAGCCGCTGGTGAACCACTGTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTaa                                                                                                                            <  2:402351/272‑1 (MQ=255)                                                                                                                                                  gATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTggg                                                                                                                               >  1:98391/1‑261 (MQ=255)                                                                                                                                                     gTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGCTGACCGCGAGAAGATGTCCAAATCGTTGGGTAACTTCTTTACCGTgcg                                                                                                             >  1:338447/1‑276 (MQ=255)                                                                                                                                                       gacatgagGGCGAACCGAGCCGGCCCGCGCCGTGGGGCTCGGTGCTGCCTGGCTGGCACATTGAATGGTCGGCAATGAACTTCAAGCAGCTGGGTAACCACTTTGATACCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCTCCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGcgcg                                                                                                           <  2:188298/271‑1 (MQ=255)                                                                                                                                                               ggCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCAACTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGAAGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTCACTTCTTTACCGTGCGCGCtgtgat                                                                                                    >  1:82365/1‑273 (MQ=255)                                                                                                                                                                tcGAGCCGAACTGGCCGGCTCCGGGTGGCGCGGGTAGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTg                                                                                                   <  1:343924/274‑1 (MQ=255)                                                                                                                                                                           ggctggtagcgcgggggCGCGGGGCGTCCTGGCTGGGAAATGGAATGTGCGGAGATGAACGGGAAGAAGCTGGGTAACACCCTAGAGATCGACGGCGGCGGTTCAGACCTACTGTTCCCGCACCACGACAACGAAAGCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTacga                                                                                        <  2:2823/262‑1 (MQ=255)                                                                                                                                                                                      gTGGGGCGAGGGTGTCCCTGGCTGGCACACGGAATGGTCGGCAAGGAACTGCAAGAAGCTGGGTAACCACGTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCg                                                                             <  2:155621/275‑1 (MQ=255)                                                                                                                                                                                         gggCGCGGGTCGTCCTGGCTGTCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCA‑‑‑CGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCGTGCGTTa                                                                      <  1:75446/276‑1 (MQ=255)                                                                                                                                                                                            ggcgGGTGGTCCGGGCGGGAACATTGAATGTTCGGCAATGAACTGCAAGCAGCGGGGTAACCACTTTGATATCCACGGCGGCGGGTCAGACCTGATGTGCCCGAACCACGAAAACGAAAGCGCGCAGGCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCGTGCGTTa                                                                      <  2:229628/275‑1 (MQ=255)                                                                                                                                                                                            cgcgGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCGTGCGTTa                                                                      >  1:60180/1‑276 (MQ=255)                                                                                                                                                                                                               cacaTTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGGTGAAATAATACGACGCGGAAACCGTGCGTTACTTCCTGATGTCGGGccct                                                   >  1:207529/1‑274 (MQ=255)                                                                                                                                                                                                                        tGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGAT‑CACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCGTGCGTTACTTCCTGATGTCGGGCCACTATCGCAGcc                                         >  1:326518/1‑276 (MQ=255)                                                                                                                                                                                                                            cGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCGTGCGTTACTTCCTGATGTCGGGCCACTATCGACGCCAGt                                      >  2:399303/1‑276 (MQ=255)                                                                                                                                                                                                                                aaTGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCGTGCGTTACTTCCTGATGTCGGGCCACTATCGCAGCCAGTTGaa                                  <  1:10193/276‑1 (MQ=255)                                                                                                                                                                                                                                                                 tatCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCGTGCGTTACTTCCTGATGTCGGGCCACTATCGCAGCCAGTTGAACTACAGCGAAGAGAACCTGAAGCAGGCGCGTg  <  1:227317/275‑1 (MQ=255)                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                              CGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCGTGCGTTACTTCCTGATGTCGGGCCACTATCGCAGCCAGTTGAACTACAGCGAAGAGAACCTGAAGCAGGCGCGTG  >  NC_000913/555020‑555550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.