Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,881,844 T→G intergenic (‑35/‑68) dmlR ← / → dmlA transcriptional activator of dmlA/D‑malate oxidase, NAD‑dependent; putative tartrate dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,881,8440TG100.0% 228.9 / NA 63intergenic (‑35/‑68)dmlR/dmlAtranscriptional activator of dmlA/D‑malate oxidase, NAD‑dependent; putative tartrate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (31/32);  total (31/32)

GTCCATCATCTGACCGACATCCTGCAAAATCCGCTGCGCCCATTCATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATTAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGACGCCATC  >  NC_000913/1881558‑1882127
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                           
gTCCATCATCTGACCGACATCCTGCAAAATCCGCTGCGCCCATTCATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGCCGCCCCACTACTTCACCAGCGGTAAATGATTCATGATTCGGTTTTTATGTTTACCCAGTTACGGGGATGaa                                                                                                                                                                                                                                                                                           >  2:551795/1‑289 (MQ=255)
       atcTGACCGACATCCTGCAAAATCCGCTGCGCCCATTCATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCttt                                                                                                                                                                                                                                                                                    >  1:57703/1‑289 (MQ=255)
       atcTGACCGACATCCTGCAAAATCCGCTGCGCCCATTCATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCttt                                                                                                                                                                                                                                                                                    >  2:705682/1‑289 (MQ=255)
        tctggacgtcATCCCGCCAAAGCCCCGGCGCCCATCCAGAAATCCCGCCTCCCTCTTCGGTAAGGGTGGCGCGGCGGGTGGTGCGGGGTAACAACACCACGTTTAGCGTTTGCCCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCtttt                                                                                                                                                                                                                                                                                   <  2:37685/280‑1 (MQ=255)
          tGACCGACATCCCTCAAAATCCGCTGCGCCCATTCATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCa                                                                                                                                                                                                                                                                                 <  1:533161/289‑1 (MQ=255)
            aCCGACATCCTGCAAAATCCGCTGCGCCCATTCATAAATCCGCTCTCCGTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGt                                                                                                                                                                                                                                                                               <  1:179633/289‑1 (MQ=255)
            aCCCACATACTGCAAAATCCGCTGCGCCCATTCATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTGTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGt                                                                                                                                                                                                                                                                               <  1:511378/289‑1 (MQ=255)
             ccGACATCCTGCAAAATCCGCTGCGCCCATTCATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGt                                                                                                                                                                                                                                                                               <  2:206409/288‑1 (MQ=255)
                aCATCCTGCAAAATCCGCTGCGCCCATTCATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAAt                                                                                                                                                                                                                                                                           >  1:160348/1‑289 (MQ=255)
                      tGCAAAATCCGCTGCGCCCATTCATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGACCGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGCGCCACCAGCATAAAGACGCGCAAATCATTCCGCCCCGGTAAATCATTCATGATTCCTGTTTTATGTTTCACCAGTTACGCGGCTGAACTCCTTTCCAGCCCATCATAgg                                                                                                                                                                                                                                                                     >  2:268497/1‑289 (MQ=255)
                            aaccGCTCCGCCCATTCATAAGACCGCTCTCCTTGTTGGGTAATGGGGAGGCGGCTGGGGGTGCGGTTGAACAACACCACGTTTAGCGGTGGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTg                                                                                                                                                                                                                                                               <  2:696256/287‑1 (MQ=255)
                                  tGCGCCCATTCATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCCGTCAATTATAGGATGGTGAtgttg                                                                                                                                                                                                                                                         >  2:338644/1‑289 (MQ=255)
                                  tGCGCCCATTCATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCCATTATAGGATGGTGAtgttg                                                                                                                                                                                                                                                         >  1:228342/1‑289 (MQ=255)
                                   gcgcCCATTCATAAATCCGCTCTCCGTCTTCGGGAATGGTGAGGCGGCGGGGGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCGCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGAtgttgt                                                                                                                                                                                                                                                        <  2:733083/289‑1 (MQ=255)
                                            cATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGa                                                                                                                                                                                                                                               <  1:705682/289‑1 (MQ=255)
                                                     gCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCtttt                                                                                                                                                                                                                                                                                   >  2:193333/1‑244 (MQ=255)
                                                     gCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCtttt                                                                                                                                                                                                                                                                                   <  1:193333/244‑1 (MQ=255)
                                                        ctcCTGCTTCGGTAATGGTGACGCGGCGGGGGGTGCGGTGTAACACCACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGt                                                                                                                                                                                                                                   <  2:165033/289‑1 (MQ=255)
                                                                             tgcggcgGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGAGCGTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCAACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACg                                                                                                                                                                                                              <  1:721762/288‑1 (MQ=255)
                                                                                          tcGGTGTAACAACACCACGTTGAGCGTGGTGTCCAGCAAGGCGAGGCGCTTGCTGACGGACGCCGGTGAAACGCCCATTTCTTCCGCCACGGCGGCAAAAACAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATtgct                                                                                                                                                                                                  <  2:597031/287‑1 (MQ=255)
                                                                                               gtAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTCCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATTGTCAGGAAGTGAGAACCCAAGGATGAAAACGATGCGTATGGCTGCGAt                                                                                                                                                                                             >  2:628507/1‑288 (MQ=255)
                                                                                                        ccacGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCCGCGGTAAATTATTCATGCTTCGTGTTTTATGTTTCACAAGTTACGGGGATGAATTCCTTTTCAGTCATTTATAGGTTGGTGATGTTGTCAATTTTTATGGTCTGGAAGTGAGAACTCAATGATTAAAAGGATACTTTTTTCTGGCGTCCCGGgagcc                                                                                                                                                                                   >  2:121835/1‑287 (MQ=255)
                                                                                                        ccacGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAg                                                                                                                                                                                                                                                                                >  1:399547/1‑196 (MQ=255)
                                                                                                        ccacGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAg                                                                                                                                                                                                                                                                                <  2:399547/196‑1 (MQ=255)
                                                                                                        ccacGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCCCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGCTGGTTATGTTGTCAATTTCGTTGGTCAGGGAGTGAGAACCCAATGATCAAACAGCTGCGTTTtgatgcaactccggatcaa                                                                                                                                                                                   >  2:41830/1‑276 (MQ=255)
                                                                                                          acGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGt                                                                                                                                                                                                                                                                               >  2:198154/1‑195 (MQ=255)
                                                                                                          acGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGt                                                                                                                                                                                                                                                                               <  1:198154/195‑1 (MQ=255)
                                                                                                                aGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTgg                                                                                                                                                                           <  1:338644/289‑1 (MQ=255)
                                                                                                                       gCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCTCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTCTTCATGATTCGCGTTTTATGTTTCCCCAGTTACGGGGTTGACTTCCTTCTCTCTCAATTATAGGATGGTGATGTTGGTAATTTTGATGGTTTCGCATTGTTCACCCAATGTTTAACACTATGTCTAATCCTGCTACCCCGGCATATGGGCTTCGCAaagat                                                                                                                                                                    >  2:35384/1‑288 (MQ=255)
                                                                                                                          ccAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGtc                                                                                                                                                                 <  1:367149/289‑1 (MQ=255)
                                                                                                                                           tttcTGCCGAACGCCGGTGAAACGCCCAGTTCTCCCCCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATCAAGACGCGCAAATCATTCAGCAGCTGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTcg                                                                                                                                                <  2:160348/286‑1 (MQ=255)
                                                                                                                                           ttacTGACGAACCCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAACATAAAGACGAGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTc                                                                                                                                                 <  1:628507/285‑1 (MQ=255)
                                                                                                                                            ggcagACGAACGCAGATGAAAGGCCAAGTCCTTCCGCAACGGCGGCAAGACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATAGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTcgc                                                                                                                                               <  1:57433/285‑1 (MQ=255)
                                                                                                                                                  cGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTa                                                                                                                                         <  2:57703/289‑1 (MQ=255)
                                                                                                                                                         cGGTGAAACGCCCAGTTCTTCCGCCACTGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTg                                                                                                                                  <  1:133393/289‑1 (MQ=255)
                                                                                                                                                           gTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGt                                                                                                                                                                                                                                                                               >  1:206269/1‑146 (MQ=255)
                                                                                                                                                           gTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGt                                                                                                                                                                                                                                                                               <  2:206269/146‑1 (MQ=255)
                                                                                                                                                                     cAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCTACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCt                                                                                                                      <  1:556114/289‑1 (MQ=255)
                                                                                                                                                                                  aCGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGCTTGGCAAAGAAGTCCTTCCTGACGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCAtt                                                                                                         >  2:760253/1‑289 (MQ=255)
                                                                                                                                                                                             aCCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGc                                                                                              >  1:433629/1‑289 (MQ=255)
                                                                                                                                                                                                  cccGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGAAGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCATGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGTGTGCGCCTTGAGGTTCGAGGAACTg                                                                                         >  1:149392/1‑289 (MQ=255)
                                                                                                                                                                                                       cGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCACGGGAGACGGGATTGGCAAAGACGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGACGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGATTg                                                                                    >  1:763525/1‑289 (MQ=255)
                                                                                                                                                                                                                aGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTg                                                                           >  1:314218/1‑289 (MQ=255)
                                                                                                                                                                                                                   aTAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCg                                                                         <  2:314218/288‑1 (MQ=255)
                                                                                                                                                                                                                   aTAAAGACGCGCAAATCAGTCAGGAGCGGTAAATTATTCATGATTGGTGTTGTATGTTTCACCAGTTACGGGGATGAATTCCTGTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGTGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCt                                                                            <  2:529495/285‑1 (MQ=255)
                                                                                                                                                                                                                            cgcAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGATGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTGGAGTTTTGAGCAAATGGTGTGGGCGAGTTGCGAGTATTAcg                                                                >  1:175942/1‑287 (MQ=255)
                                                                                                                                                                                                                            cgcAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACa                                                                >  2:118517/1‑288 (MQ=255)
                                                                                                                                                                                                                                aaTCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCAt                                                           <  1:268497/289‑1 (MQ=255)
                                                                                                                                                                                                                                   cagttagcagcGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCATTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCg                                                                         <  1:243744/267‑1 (MQ=255)
                                                                                                                                                                                                                                             cGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGACGGGATTCGCGTGTTACAGGCTGCCGCTGCGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGTCGAGCTGCGAGTATTACAGCCATCCCGGTAAAatga                                              >  1:296639/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAatga                                              >  2:447950/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTGGAGTTTTTAGCAAATGGCGTGGGCGAGCTGCGAGTATTACAGCCATCCCGGTCAAatga                                              >  2:758009/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  aaTTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAATGATGCCg                                         <  1:447950/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       tttataatgatgtttttATGTATTGCCAGTTACTGGGATGAATGCCTTTTCAGTCAATTATGGCATGTGCATGGTGACCATTTTGTTGGTCAGGAAGTGAGAACCCAATGATGAAAACTATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGTAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTTAGTTTTGAGCAAATGGAGTGGGCAAGCTGCGAGTATTACAGCCATCACGGTAAAATGATGCCGgacga                                    <  2:393738/276‑1 (MQ=255)
                                                                                                                                                                                                                                                       ttCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAATGATGCCGgacga                                    >  1:368857/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          aTGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGATGCCGCTGAGCGCTGGGGCTTCGCCGTGAGTTTTGAGCAAATGGAGGGGGCGAGCTGCGAGCAGTAAGGCCATCAGGGTAGAatgtgtcagggatgctg                                 >  2:379622/1‑275 (MQ=255)
                                                                                                                                                                                                                                                          aTGATTCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCAAATGATGAAAACGATGCGTATTGCTGCGCCCCCGGGCGACGGAATTGGCAACGAAGTCCTTCCTGAAGGAATTCGCGGGTTACAGGCTGCCGCTGACCGCTGGGTCTTCGCCTTGAGTTTTTGTCAACTGGCATGGGCGAGCTGCGGTTATTCCAGCCATCAAGGTAATATGTAGCCGGACGACTg                                 >  2:163730/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               tCGTGTTTTATGTTTCACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCCTCACGGTAAAATGATGCCGGACGACTGGCATg                            >  1:722306/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              cACCAGTTACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGTCTTCGCCTTGCGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCAATCACGGTAAAATGATGCCGGACGACTGGCACGAGCAGCGTAGCCGtt             >  2:585549/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     tACGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGAc        <  1:510629/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      tcGGGGATGAATTCCTTTTCAGTGGATTATAGGATGGTGATGTTGTCAAGTTTGATGGTGAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGACGcc     <  1:379622/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      aCGGGGATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGACGcc     <  1:118517/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                           gATGAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGCGTGTTGAGCACATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAATTACTCCGGACGACTGGCATGCGCAAATTAGCCGTTTACACGCCAta  >  2:259077/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                           
GTCCATCATCTGACCGACATCCTGCAAAATCCGCTGCGCCCATTCATAAATCCGCTCTCCTTCTTCGGTAATGGTGACGCGGCGGGTGGTGCGGTGTAACAACACCACGTTTAGCGTTTGCTCCAGCAAGGCGATGCGCTTGCTGACGAACGCCGGTGAAACGCCCAGTTCTTCCGCCACGGCGGCAAAACCAGCCCGGCGAGCCACCAGCATAAAGACGCGCAAATCATTCAGCAGCGGTAAATTATTCATGATTCGTGTTTTATGTTTCACCAGTTACGGGGATTAATTCCTTTTCAGTCAATTATAGGATGGTGATGTTGTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGACGCCATC  >  NC_000913/1881558‑1882127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: