New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3304484	NA (NA)	4 (0.030)	3/542	NT	NA	intergenic (+29/+89)	yhbW/mtr	putative luciferase‑like monooxygenase/tryptophan transporter of high affinity
	?	NC_000913	= 3304553	NA (NA)					intergenic (+98/+20)	yhbW/mtr	putative luciferase‑like monooxygenase/tryptophan transporter of high affinity

AAGCCTTTGTGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3304178‑3304484 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccttatccgaCATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTGCTCAGAC  <  NC_000913/3304553‑3304257                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAGCCTTTGGGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCC                                                                                                                                                                                                                                                                                                                   <  1:283835/299‑1  AGCCTTTGTGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTT                                                                                                                                                                                                                                                                                                                 <  1:1246134/300‑1  AGCCTTTGTGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTT                                                                                                                                                                                                                                                                                                                 >  1:608411/1‑300     CTTTGTGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGCTTCTGGTCACCGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTAGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGCTAGTGTGTCTTAACGCGGGAAGACTTAT                                                                                                                                                                                                                                                                                                               >  1:970108/1‑299     CTTTGTGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATC                                                                                                                                                                                                                                                                                                              <  1:294700/300‑1                   GCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACAAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGCGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATC                                                                                                                                                                                                                                                                                                              >  2:870591/1‑286                      GTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGCTGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTA                                                                                                                                                                                                                                                                                                                >  2:657768/1‑281                                                                                       gatctTGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGACATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGG                                                                                                                                                                                                                            <  1:1359910/295‑1                                                                                        AGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGACATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAG                                                                                                                                                                                                                             <  1:986408/298‑1                                                                                            TGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGACGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGACATTTCTGCTGCCTCAACAATGCCTGATGCGCTTCGCTTATCAGGTCTCTGTAGGACAGCGTTGCCAGCT                                                                                                                                                                                                                                     >  2:1186947/1‑286                                                                                                      CAGGCGCTGAGTAGGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGACATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGG                                                                                                                                                                                                                            <  2:119506/285‑1                                                                                                                                                                                                                                                                                                     cgtgGCCGTATCCGACATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGC                             <  2:295223/281‑1                                                                                                                                                                                                                                                                                                          CCTTATCCGACATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCAGCGCCTGGGGGGCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGAATGCAAGCCATGACGCACTTTTGCTGTATCCCCTACAAACAACATAATCAACGCCTGATGCACGCCAAACT          >  1:969474/1‑299                                                                                                                                                                                                                                                                                                           CTTATCCGACATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTG         >  1:744511/1‑299                                                                                                                                                                                                                                                                                                              ATCCGACATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCCCTTTCGCTTTATCCCCTACCAACGACATACTCAGCGCCTGCTGC                    >  2:435443/1‑285                                                                                                                                                                                                                                                                                                              ATCCGACATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTGCTCA     <  1:602124/300‑1                                                                                                                                                                                                                                                                                                               TCCGACATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGACCGACTGCAAGCCACGACGCCCTTTCGCTTTATCACCTACTAACGACATACTACGCTCCTACTGCA                   >  2:1120919/1‑285                                                                                                                                                                                                                                                                                                                CCGACATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTGCTCAGA   <  1:1409119/300‑1                                                                                                                                                                                                                                                                                                                 CGACATTTCTGCTGCCTACACAATGCCTGCTGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGACGGTTTCGCGCAGGACCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCAAGCCATACTGATCAGAC  >  1:1005834/1‑300                                                                                                                                                                                                                                                                                                                 CGACATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTGCTCAGAC  <  1:409082/300‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAGCCTTTGTGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3304178‑3304484 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccttatccgaCATTTCTGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTGCTCAGAC  <  NC_000913/3304553‑3304257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.