New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4444843	127 (0.850)	3 (0.020)	3/546	NT	2.4%	coding (732/3780 nt)	tamB	translocation and assembly module for autotransporter export, inner membrane subunit
	?	NC_000913	= 4444969	125 (0.870)					coding (858/3780 nt)	tamB	translocation and assembly module for autotransporter export, inner membrane subunit
Rejected: Frequency below/above cutoff threshold.

CAACATTAAGATTGATGACACCACGGTATCGGTGATGGACTTCACCTCCGGCCTGAACTGGCAGGAGAAAACCCTGACCCTGAAACCGACGTCGCTGAAAGGCCTGCTGATTGCTCTGCCGAAAGTGGCGGAAGTGGCGCAGGAAGAAGTGGTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4444540‑4444843 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagctgcgcCGTGCCGCTGGCGTTGACGATCCCTTGACTGGAATCGATATCCAGGGCGTCCAGTTTAGTATTGCCGTCAATGCTGCTCACTTTCAGCAGCATGGTGCTCACGGTGATGTCCGTGTCGCCCGTCACGCGCAGCTGCTCGCCCTTAAACTCTTCAATGTTCAGGTTAAGCGGCAAATGCACGTCGGTCATTTCCGGCAATACCGGGCGAGAAAAGAGATCTTTCAGCGTTTCGCCGAGCGGCTTTTCATCCGGCTGCGGATTTTCAATTTTCGGTTCGACCACTTCTTCCTGCGC  <  NC_000913/4444969‑4444676                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAACATTAAGATTGATGACACCACGGTATCGGTGATGGACTTCACCTCCGGCCTGAACTGGCAGGAGAAAACCCTGACCCTGAAACCGACGTCGCTGAAAGGCCTGCTGATTGCTCTGCCGAAAGTGGCGGAAGTGGCGCAGGAAGAAGTGGTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGC                                                                                                                                                                                                                                                                                                             <  1:119197/299‑1  AACATTAAGATTGATGACACCACGGTATCGGTGATGGACTTCACCTCCGGCCTGAACTGGCAGGAGAAAACCCTGACCCTGAAACCGACGTCGCTGAAAGGCCTGCTGATTGCTCTGCCGAAAGTGGCGGAAGTGGCGCAGGAAGAAGTGGTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGCTG                                                                                                                                                                                                                                                                                                           <  1:1363278/300‑1    CATTAAGATTGATGACACCACGGTATCGGTGATGGACTTCACCTCCGGCCTGAACTGGCAGGAGAAAACCCTGACCCTGAAACCGACGTCGCTGAAAGGCCTGCTGATTGCTCTGCCGAAAGTGGCGGAAGTGGCGCAGGAAGAAGTGGTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGCTGC                                                                                                                                                                                                                                                                                                          >  1:1076909/1‑299          GATTGATGACACCACGGTATCGGTGATGGACTTCACCTCCGGCCTGAACTGGCAGGAGAAAACCCTGACCCTGAAACCGACGTCGCTGAAAGGCCTGCTGATTGCTCTGCCGAAAGTGGCGGAAGTGGCGCAGGAAGAAGTGGTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGatcggaagagc                                                                                                                                                                                                                                                                                                   >  1:532646/1‑289           ATTGATGACCCCACGGTATCTGTGATGGACTTCACCTCCGGCCTGAACTGGCAGGAGAAAACCCTGACCCTGAAACCGACGTCGCTGAAAGGCCTGCTGATTGCTCTGCCGAAAGTGGCGTAAGTGGCGCAGGAAGCAGTGGTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGC                                                                                                                                                                                                                                                                                                                <  2:469040/286‑1                TGACACCACGGTATCGGTGATGGACTTCACCTCCGGCCTGAACTGGCAGGAGAAAACCCTGACCCTGAAACCGACGTCGCTGAAAGGCCTGCTGATTGCTCTGCCGAAAGTGGCGGAAGTGGCGCAGGAAGAAGTGGTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGCT                                                                                                                                                                                                                                                                                                            >  2:535558/1‑285                                                                                                   AAGGCCTGCTGATTGCTCTGCCGAAAGTGGCGGAAGTGGCGCAGGAAGAAGTGGTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGCTGCGCCGTGCCGCTGGCGTTGACGATCCCTTGACTGGAATCGATATCCAGGGCGTCCAGTTTAGTATTGCCGTCAATGCTGCTCACTTTCAGCAGCATG                                                                                                                                                                                                          >  1:1230409/1‑300                                                                                                                                                    AGTGGTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGCTGCGCCGTGCCGCTGGCGTTGACGATCCCTTGACTGGAATCGATATCCAGGGCGTCCAGTTTAGTATTGCCGTCAATGCTGCTCACTTTCAGCAGCATGGTGCTCACGGTGATGTCCGTGTCGCCCGTCACGCGCAGCTGCTCGCCC                                                                                                                                                          <  1:560852/299‑1                                                                                                                                                            AACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCACGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGCTGCGCCGTGCCGCTGGCGTTGACGATCCCTTGACTGGAATCGATATCCAGGGCGTCCAGTTTAGTATTGCCGTCAATGCTGCTCACTTTCAGCAGCATGGTGCTCACGGTGATGTCCGTGTCGCCCGTCACGCGCAGCTGC                                                                                                                                                                <  2:1076566/285‑1                                                                                                                                                                                                                                                                                                          GCTGCGCCGTGCCGCTGGTGTTGACGATCCCTTGACTGGAATCGATTTCCAGGGCTTCCAGTTTAGTATTGCCGTCCATGCTGCTCACTTTCAGCAGCATGGTGCTCACGGTGATGTCCGTGTCGCCCGTCACGCGCCGCTGCTCGCCCTTACACTCTTCAATGTTCAGGTTAAGCGGCAAATGCACGTCGGTCATTTCCGGCAATACCGGGCGTGAAAAGAGATCTTTCAGCGTTTCGCCGACCGGCTTTTCATCCGGCTGCGGATTTTCAATTTTCGGTTCGACCACTTCTTCCTGCG   <  1:777865/300‑1                                                                                                                                                                                                                                                                                                          GCTGCGCCGTGCCGCTGGCGTTGACGATCCCTTGACTGGAATCGATATCCAGGGCGTCCAGTTTAGTATTGCCGTCAATGCTGCTCACTTTCAGCAGCATGGTGCTCACGGTGATGTCCGTGTCGCCCGTCACGCGCAGATGCTCGCCCTTAAACTCTTCAATGTTAAGGTTAAGCGGCAAATGCACGTCGGTCATTTCCGGCAATACCGGGCGAGAAAAGAGATCTTTCAGCGTTTCGCCGAGCGGCTTTTCATCCGGCTGCGGATTTTCAATTTTCGGTTCGA                  >  2:1167496/1‑285                                                                                                                                                                                                                                                                                                           tTGCGCCGTGCCGCTGGCTGTGACTATCCCTTGACTGGAATCTATCTCCAGGGCGTCCAGTTTAGTATTGCCGTCAATGCTGCTCACTTTCAGCAGCAGGGTGCTCACGGTGATGTCCGTGTCGCCCGTCACGCGCAGCTGCTCTCCCTTAAACTCTTCAATGTTCAGGTTAAGCGGCAAATGCACGTCGGTCATTTCCGGCAATACCGGGCGAGAAAAGAGATCTTTCAGCGTTTCGCCGAGCGGCTTTTCATCCGGCTGCGGATTTTCAATTTTCGGTTCGACC                <  2:321180/285‑1                                                                                                                                                                                                                                                                                                           CTGCGCCGTGCTGCTGGCTTTGAGTATCCCTTGACTTGAAGCGATATCCAGGGCGTCCAGTTTAGTATGGCCGTCAATGCTGCTCACTTTCAGCAGCATGGTGCTCACGGTGATGTCCGTGTCGCCCGTCACGCGCAGCTGCTCGCCCTTAAACTCTTCAATGTTCAGGTTAAGCGGCAAATGCACGTCGGTCATTTCCGGCAATACCGGGCGAGAAAAGAGATCTTTCAGCGTTTCGCCGAGCGGCTTTTCATCCGGCTGCGGATTTTCAATTTTCGGTTCGACC                <  2:1186093/286‑1                                                                                                                                                                                                                                                                                                           CTGCGCCGTGCCGCTGGCGTTGACGATCCCTTGACTGGAATCGATATCCAGGGCGTCCAGTTTAGTATTGCCGTCAATGCTGCTCACTTTCAGCAGCATGGTGCTCACGGTGATGTCCGTGTCGCCCGTCACGCGCAGCTGCTCGCCCTTAAACTCTTCAATGTTCAGGTTAAGCGGCAAATGCACGTCGGTCATTTCCGGCAATACCGGGCGAGAAAAGAGATCTTTCAGCGTTTCGCCGAGCGGCTTTTCATCCGGCTGCGGATTTTCAATTTTCGGTTCGAC                 <  2:195080/285‑1                                                                                                                                                                                                                                                                                                           CTGCGCCGGTCCGCTGGCGTTGACGTTCCCTTTCCTGGCATCGATATCCAGGGCGTCCAGTTTATTATTGCCGTCAATGCTGCTCCCTTTCAGCAGCATGGTGCTCACGGTGATGTCCGTGTCGCCCGTCACGCGCAGCTGCTCGCCCTTAAACTCTTCAATGTTCAGGTTAAGCGGCAAATGCACGTCGGTCATTTCCGGCAATACCGGGCGAGAAAAGAGATCTTTCAGCGTTTCGCCGAGCGGCTTTTCATCCGGCTGCGGATTTTCAATTTTCGGTTCGACC                <  2:816321/286‑1                                                                                                                                                                                                                                                                                                            TGCGCCGTGCCGCTGGCGTTGACGATCCCTTGACTGGAATCGATATCCAGGGCGTCCAGTTTAGTATTGCCGTCAATGCTGCTCACTTTCAGCAGCATGGTGCTCACGGTGATGTCCGTGTCGCCCGTCACGCGCAGCTGCTCGCCCTTAAACTCTTCAATGTTCAGGTTAAGCGGCAAATGCACGTCGGTCATTTCCGGCAATACCGGGCGAGAAAAGAGATCTTTCAGCGTTTCGCCGAGCGGCTTTTCATCCGGCTGCGGATTTTCAATTTTCGGTTCGACCACTTCTTCCTGCGC  >  1:438584/1‑299                                                                                                                                                                                                                                                                                                               GCCGTGCCGCTGGCGTTGACGATCCCTTGACTGGAATCGATATCCAGGGCGTCCAGTTTAGTATTGCCGTCAATGCTGCTCACTTTCAGCAGCATGGTGCTCACGGTGATGTCCGTGTCGCCCGTCACGCGCAGCTGCTCGCCCTTAAACTCTTCAATGTTCAGGTTAAGCGGCAAATGCACGTCGGTCATTTCCGGCAATACCGGGCGAGAAAAGAGATCTTTCAGCGTTTCGCCGAGCGGCTTTTCATCCGGCTGCGGATTTTCAATTTTCGGTTCGACCACT             <  2:978611/285‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAACATTAAGATTGATGACACCACGGTATCGGTGATGGACTTCACCTCCGGCCTGAACTGGCAGGAGAAAACCCTGACCCTGAAACCGACGTCGCTGAAAGGCCTGCTGATTGCTCTGCCGAAAGTGGCGGAAGTGGCGCAGGAAGAAGTGGTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4444540‑4444843 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagctgcgcCGTGCCGCTGGCGTTGACGATCCCTTGACTGGAATCGATATCCAGGGCGTCCAGTTTAGTATTGCCGTCAATGCTGCTCACTTTCAGCAGCATGGTGCTCACGGTGATGTCCGTGTCGCCCGTCACGCGCAGCTGCTCGCCCTTAAACTCTTCAATGTTCAGGTTAAGCGGCAAATGCACGTCGGTCATTTCCGGCAATACCGGGCGAGAAAAGAGATCTTTCAGCGTTTCGCCGAGCGGCTTTTCATCCGGCTGCGGATTTTCAATTTTCGGTTCGACCACTTCTTCCTGCGC  <  NC_000913/4444969‑4444676

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.