| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571858 | 20,628:1 | +G | 100% | coding (288/306 nt) | pSAS24 → | putative exported protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571858 | 20,628 | 1 | . | G | 99.3% | 681.9 / ‑3.3 | 154 | K96K (AAA→AAG) | pSAS24 | putative exported protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); major base G (71/81); minor base T (1/0); total (73/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 167 total aligned reads displayed.
TATAAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAA‑ATATTCCTAGCTTTTTAAAATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G > BX571858/20533‑20652 | ataAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACa‑aaaga > 2:878955/1‑95 (MQ=255) aTTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATAtt < 1:2302946/97‑1 (MQ=255) ttGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTc < 2:133761/97‑1 (MQ=255) ggATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCt > 2:1940480/1‑97 (MQ=255) ggATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCt < 1:1947514/97‑1 (MQ=255) ggATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCt > 2:2487090/1‑97 (MQ=255) gATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTa < 1:2392572/97‑1 (MQ=255) gATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTa < 2:1241812/97‑1 (MQ=255) aTTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGATCGATAGAATACATTACA‑AAAGATATTCCTAg > 2:1451620/1‑97 (MQ=255) ttttttttGTTATGATCCTACAAAAGAATAAGTGAAAATAAATCATAAACGGAAAGATGTGCGTTAGAAAGAAAACATTACATAAG‑ATATACCTAGc > 2:1987825/1‑97 (MQ=255) ttttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATAATCCTAGc > 2:2321259/1‑97 (MQ=255) ttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCtt > 2:827924/1‑97 (MQ=255) aGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTa > 1:2168658/1‑97 (MQ=255) aGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTa > 1:2168515/1‑97 (MQ=255) ggTTATGATCCTGCAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTaa < 1:1873588/97‑1 (MQ=255) ggTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTaa < 2:596785/97‑1 (MQ=255) ggTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTaa > 1:1434154/1‑97 (MQ=255) ggTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTaa < 2:1684475/97‑1 (MQ=255) tATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAAt < 1:604809/97‑1 (MQ=255) tATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAAt > 2:227170/1‑97 (MQ=255) aTGATCCTACAAAAGAATATGTGACAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATCCATTAGA‑AAAGATATTCCGAGCTTTTTaaaaag > 2:1012971/1‑95 (MQ=255) aTGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATg > 2:2629974/1‑97 (MQ=255) tGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGa > 1:808657/1‑97 (MQ=255) tGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGa > 2:776301/1‑97 (MQ=255) gATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAg > 1:447764‑M2/1‑96 (MQ=255) gATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAg < 1:1097001‑M2/97‑2 (MQ=255) aTCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAgg < 2:1609942‑M2/97‑3 (MQ=255) aTCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAgg < 1:2481007‑M2/97‑3 (MQ=255) ccTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtg < 1:1968029‑M2/97‑5 (MQ=255) ccTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtg > 2:65560‑M2/1‑93 (MQ=255) cTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtga < 1:961652‑M2/97‑6 (MQ=255) aCAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgacc > 2:2445018‑M2/1‑90 (MQ=255) aaaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccga > 1:2530518‑M2/1‑88 (MQ=255) aaaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccga > 1:52335‑M2/1‑88 (MQ=255) aaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgaa < 1:755651‑M2/97‑11 (MQ=255) aaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgata > 1:1895808‑M2/1‑86 (MQ=255) aaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgata < 1:1596986‑M2/97‑12 (MQ=255) gAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagt < 2:1717902‑M2/97‑14 (MQ=255) gAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagt < 2:1824346‑M2/97‑14 (MQ=255) gAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagt < 2:2012678‑M2/97‑14 (MQ=255) gAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagt > 1:110102‑M2/1‑84 (MQ=255) aaTATGAGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaacgatagtg < 2:932647‑M2/97‑15 (MQ=255) atatGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtga < 1:909349‑M2/97‑16 (MQ=255) agtgaAAGTAAATCATAAAGGGAAAAATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataa > 2:597494‑M2/2‑79 (MQ=255) tgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAACATGAggtgaccgatagtgataaaa < 2:403839‑M2/97‑21 (MQ=255) tgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaa > 1:464335‑M2/1‑77 (MQ=255) tgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaa > 2:1296439‑M2/1‑77 (MQ=255) aGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttg < 1:1300768‑M2/97‑25 (MQ=255) aGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttg < 1:2290348‑M2/97‑25 (MQ=255) aaTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaa < 1:1182503‑M2/97‑29 (MQ=255) aaTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaa < 2:2327390‑M2/97‑29 (MQ=255) aTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaat > 2:2493432‑M2/1‑68 (MQ=255) tCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatg > 2:2320195‑M2/1‑67 (MQ=255) tCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatg > 2:1417270‑M2/1‑67 (MQ=255) cATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgt < 1:631239‑M2/97‑32 (MQ=255) aTAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtt < 1:1776441‑M2/97‑33 (MQ=255) aTAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtt < 2:2150936‑M2/97‑33 (MQ=255) aaaGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttt < 1:2227977‑M2/97‑35 (MQ=255) aaGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgttttt < 1:738583‑M2/97‑36 (MQ=255) aaGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgttttt > 2:1425725‑M2/1‑62 (MQ=255) ggAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgta > 2:2416186‑M2/1‑59 (MQ=255) gAAATATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaa < 1:1631949‑M2/97‑40 (MQ=255) aaaTATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaa < 2:237100‑M2/97‑41 (MQ=255) aaaTATGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaa < 1:1329720‑M2/97‑41 (MQ=255) tatGTGCGTTCGATAGTATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaa > 2:63387‑M2/1‑54 (MQ=255) tatGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaa > 1:455823‑M2/1‑54 (MQ=255) atGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaa < 1:1581125‑M2/97‑45 (MQ=255) atGTGCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaa > 2:523962‑M2/1‑53 (MQ=255) tgCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggt < 1:2054020‑M2/97‑48 (MQ=255) gCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggta > 1:149594‑M2/1‑49 (MQ=255) gCGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggta > 1:2085266‑M2/1‑49 (MQ=255) cGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaa > 1:2640759‑M2/1‑48 (MQ=255) cGTTCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaa < 1:2049236‑M2/97‑50 (MQ=255) ttCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaata > 2:752538‑M2/1‑46 (MQ=255) ttCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaata > 2:658223‑M2/1‑46 (MQ=255) ttCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaata > 1:156149‑M2/1‑46 (MQ=255) ttCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaata < 2:1845564‑M2/97‑52 (MQ=255) ttCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaata < 1:1830201‑M2/97‑52 (MQ=255) tCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataa > 1:1746197‑M2/1‑45 (MQ=255) tCGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataa < 2:1799236‑M2/97‑53 (MQ=255) cGATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaa > 1:1603500‑M2/1‑44 (MQ=255) gATAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaa > 2:2244357‑M2/1‑43 (MQ=255) aTAGAATACATTACA‑AAATATATTCCTATCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaa > 2:301236‑M2/1‑42 (MQ=255) aTAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaa > 1:1891325‑M2/1‑42 (MQ=255) aTAGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaa > 2:301225‑M2/1‑42 (MQ=255) aGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaaca < 1:1749923‑M2/97‑58 (MQ=255) aGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaaca < 2:2258975‑M2/97‑58 (MQ=255) aGAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaaca < 1:282931‑M2/97‑58 (MQ=255) gAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacat > 1:2030806‑M2/1‑39 (MQ=255) gAATACATTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacat < 2:2033993‑M2/97‑59 (MQ=255) aTTACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttaga < 2:2173561‑M2/97‑65 (MQ=255) ttACA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagac < 2:1086593‑M2/97‑66 (MQ=255) caa‑aag‑ataTTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacgga > 1:1930684‑M2/3‑29 (MQ=255) aCA‑AAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaacacatttaagacgg < 2:423438‑M2/97‑68 (MQ=255) aa‑aag‑atATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggat < 2:371181‑M2/96‑70 (MQ=255) a‑aag‑aTATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagagggatg < 2:2603641‑M2/97‑71 (MQ=255) a‑aag‑aTATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatg < 1:2486215‑M2/97‑71 (MQ=255) a‑aag‑aTATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatg < 2:1170862‑M2/97‑71 (MQ=255) a‑aag‑aTATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatg < 1:1823445‑M2/97‑71 (MQ=255) a‑aag‑aTATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatg < 2:1170898‑M2/97‑71 (MQ=255) | TATAAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACA‑AAA‑ATATTCCTAGCTTTTTAAAATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G > BX571858/20533‑20652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |