New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	BX571857	= 1937057	129 (0.810)	3 (0.020)	3/152	NT	2.3%	noncoding (36/76 nt)	tRNA Asp anticodon GTC_ Cove score 83.32	tRNA‑Asp
	?	BX571857	1937744 =	141 (1.010)					noncoding (35/76 nt)	tRNA Ala anticodon TGC_ Cove score 89.05	tRNA‑Ala
Rejected: Frequency below/above cutoff threshold.

ACACATGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  BX571857/1936952‑1937057 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcctgcgtgCAAAGCAGGCGCTCTCCCAGCTGAGCTAAGCCCCCATAATAATTACAGTATATCGGGAAGACAGGATTCGAACCTGCGACCCCTTGGTCCCAAACC  >  BX571857/1937744‑1937839                                                                                                                                                                                                            ACACATGGAGCTTCAATCCATTGCTCTACCAGCTGGGCGACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATC                                                                                                           <  2:87288/97‑1  CACATGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCT                                                                                                          <  1:2188835/97‑1  CACATGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCT                                                                                                          <  1:2257015/97‑1  CACATGGAGCTTCAATCCATTGCTCGACCAACGGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCT                                                                                                          <  2:620024/97‑1   ACATGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTC                                                                                                         >  1:760695/1‑97       GGAGCTTCCGGCCATTGCTCTACCAACTGTGCTACTGAACCATACTAAAACTGTACTGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGC                                                                                                     <  2:467909/97‑1       GGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGC                                                                                                     <  1:1742712/97‑1       GGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGC                                                                                                     >  2:2486935/1‑97        GAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCG                                                                                                    >  1:704299/1‑97        GAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCG                                                                                                    >  2:1861361/1‑97        GAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCG                                                                                                    >  1:1246092/1‑97         AGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGT                                                                                                   >  1:470386/1‑97          GCTTCAATCCATTGCTCTACCAACTGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTG                                                                                                  >  1:1565525/1‑97                                                 aAATAAAGAAGTAATGATGGCGGTCACGACGGGAATCGAACCCGCGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAAGCCCCCATAA                                                           <  1:335819/96‑1                                                                      GGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAAGCCCCCATAATAATTACAGTATATCGGGAAG                                      <  2:1866241/97‑1                                                                      GGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAAGCCCCCATAATAATTACAGTATATCGGGAAG                                      >  1:1866242/1‑97                                                                                                 CTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAAGCCCCCATAATAATTACAGTATATCGGGAAGACAGGATTCGAACCCGCGACCCCTacg           >  2:488924/1‑94                                                                                                    CTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAAGCCCCCATAATAATTACAGTATATCGGGAAGACAGGATTCGAACCTGCGACCCCTTGGTCC        >  1:1169744/1‑97                                                                                                      GCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAAGCCCCCATAATAATTACAGTATATCGGGAAGACAGGATTCGAACCTGCGACCCCTTGGTCCCA      <  1:512379/97‑1                                                                                                      GCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAAGCCCCCATAATAATTACAGTATATCGGGAAGACAGGATTCGAACCTGCGACCCCTTGGTCCCA      <  2:1785294/97‑1                                                                                                      GCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAAGCCCCCATAATAATTACAGTATATCGGGAAGACAGGATTCGAACCTGCGACCCCTTGGTCCCA      <  2:2458833/97‑1                                                                                                      GCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAAGCCCCCATAATAATTACAGTATATCGGGAAGACAGGATTCGAACCTGCGACCCCTTGGTCCCA      <  2:2572552/97‑1                                                                                                          GCAAAGCAGGCGCTCTCCCAGCTGAGCTAAGCCCCCATAATAATTACAGTATATCGGGAAGACAGGATTCGAACCTGCGACCCCTTGGTCCCAAACC  <  1:1378901/97‑1                                                                                                                                                                                                            ACACATGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAACCATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  BX571857/1936952‑1937057 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcctgcgtgCAAAGCAGGCGCTCTCCCAGCTGAGCTAAGCCCCCATAATAATTACAGTATATCGGGAAGACAGGATTCGAACCTGCGACCCCTTGGTCCCAAACC  >  BX571857/1937744‑1937839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.