Predicted mutation
evidence seq id position mutation freq annotation gene description
RA BX571857 2,700,209 A→G 5.6% D753D (GAT→GAC SAS2516 ← fibrinogen and keratin‑10 binding surface anchored protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*BX5718572,700,2090AG 5.6% 869.9 / 8.4 235D753D (GAT→GACSAS2516fibrinogen and keratin‑10 binding surface anchored protein
Reads supporting (aligned to +/- strand):  ref base A (94/122);  new base G (8/9);  total (102/133)
Fisher's exact test for biased strand distribution p-value = 8.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 245 total aligned reads displayed.

CTGAGTCGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTATCTGAATCTGAGTCGCTA  >  BX571857/2700115‑2700305
                                                                                              |                                                                                                
 tgagtcGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCg                                                                                               >  1:2034415/1‑97 (MQ=255)
 tgagtcGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCg                                                                                               <  1:1386982/97‑1 (MQ=255)
  gagtcGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGc                                                                                              <  1:731467/97‑1 (MQ=255)
  gagtcGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGc                                                                                              <  1:2581689/97‑1 (MQ=255)
   agtcGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCt                                                                                             <  1:1490736/97‑1 (MQ=255)
   agtcGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCt                                                                                             <  1:1438627/97‑1 (MQ=255)
    gtcGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGATTCGGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTg                                                                                            <  2:2160226/97‑1 (MQ=255)
       gCTATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTGTCTGGGTCTGAGTCGCTGTCTGAGTCTGACTCGCTATCTGAATCTGAATCGCTGtct                                                                                         >  2:1691647/1‑97 (MQ=11)
       gCTATCTGAATCTGAAGCGCGGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGtct                                                                                         <  2:307562/97‑1 (MQ=255)
        cTATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGtctg                                                                                        <  1:111830/97‑1 (MQ=255)
         tATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGtctga                                                                                       >  1:1002029/1‑97 (MQ=255)
         tATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCCGAGTCCCGGTCTGGGTCTGGGTCGCGGtctgg                                                                                       >  2:286594/1‑96 (MQ=14)
          atctgaatctgaATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGtctgaa                                                                                      <  2:1238025/97‑1 (MQ=255)
          atctgaatctgaATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGtctgaa                                                                                      <  1:631368/97‑1 (MQ=255)
          atctgaatctgaATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGtctgaa                                                                                      <  1:117452/97‑1 (MQ=255)
            ctgaatctgaatCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGtctgagtc                                                                                    >  1:844072/1‑97 (MQ=255)
             tgaatctgaatcGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGtctgaatcc                                                                                   >  1:2145107/1‑96 (MQ=255)
              gaatctgattcGCGGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGCGTCGCTGTCTGAGTCTGAATCGCTGtctgaatctg                                                                                  <  2:1193793/97‑1 (MQ=255)
              gaatctgaatcGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGtctgaatctg                                                                                  <  2:804518/97‑1 (MQ=255)
               aatctgaatcGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGtctgaatctga                                                                                 <  2:1584911/97‑1 (MQ=255)
               aatctgaatcGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGtctgaatctga                                                                                 <  1:2591252/97‑1 (MQ=255)
               aatctgaatcGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGtctgaatctga                                                                                 <  2:135820/97‑1 (MQ=255)
                  ctgaatcGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCtgaatctgaatc                                                                              >  2:1446159/1‑97 (MQ=255)
                   tgaatcGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCg                                                                             <  2:1631389/97‑1 (MQ=255)
                    gaatgGCCGTCTGTGGCTGAGGCGCCGTCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGc                                                                            <  2:2317852/97‑1 (MQ=14)
                     aatcGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCCGAATCGCt                                                                           <  2:2145106/97‑1 (MQ=255)
                        cGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTgtctgagtctgaatcgctgtctgagtctgaatcgctatc                                                                        >  2:455223/1‑94 (MQ=255)
                        cGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTgtc                                                                        >  1:1736979/1‑97 (MQ=255)
                         gCTGTCTGAGTCTGAATCGCTATCGGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTgtct                                                                       <  2:1148620/97‑1 (MQ=255)
                          cTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTgtctg                                                                      <  1:786891/97‑1 (MQ=255)
                          cTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTgtctg                                                                      <  2:195554/97‑1 (MQ=255)
                            gtctgagtctgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTgtctgag                                                                    <  2:2480584/97‑1 (MQ=255)
                              ctgaggctgaATCGCTATCTGACTCGGAGTCTTTGTCTGGGTCTGCGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTgcctgagtc                                                                  <  2:559732/97‑1 (MQ=17)
                               tgagtctgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGCCTGAATCGCTGCCTGAGTCTGAATCGCTgtctgaggcc                                                                 >  2:2508648/1‑94 (MQ=14)
                                gagtctgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTgtctgagtctg                                                                >  2:424366/1‑97 (MQ=255)
                                gagtctgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTgtctgagtctg                                                                >  1:1512195/1‑97 (MQ=255)
                                 agtctgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAGTCGCTgtctgagtctga                                                               <  2:645576/97‑1 (MQ=255)
                                  gtctgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGaa                                                              >  2:2373448/1‑97 (MQ=255)
                                   tctgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAAt                                                             <  1:253016/97‑1 (MQ=255)
                                    ctggATCGCTATCTGATTCTGAGTCGCTGTCGGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATc                                                            <  2:1017928/97‑1 (MQ=255)
                                    ctgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATc                                                            <  1:862160/97‑1 (MQ=255)
                                    ctgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATc                                                            >  1:522012/1‑97 (MQ=255)
                                    ctgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATc                                                            >  2:1802167/1‑97 (MQ=255)
                                    ctgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAATCCGAATc                                                            >  1:2210696/1‑97 (MQ=255)
                                     tgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCCGAATCg                                                           >  2:430640/1‑97 (MQ=255)
                                     tgaATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCGGAGTCGCTGTCTGAGTCCGAATCTCTATCTGAATCTGAGTca                                                           >  2:1220890/1‑96 (MQ=11)
                                       gggcGCTGTCTGAGTGTGGGTCGCTGTCTGAGTCTGAGTCGGTGTCGGGGTCGGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTGCGAATCGCt                                                         <  2:1477153/94‑1 (MQ=2)
                                        aTCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTa                                                        <  1:2058722/97‑1 (MQ=255)
                                           gCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCCGAATCGCTGTCtgaatctgaatca                                                                             <  1:1654463/73‑2 (MQ=255)
                                              aTCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTAtctgag                                                  <  1:1137008/97‑1 (MQ=255)
                                               tCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTAtctgagt                                                 >  2:729371/1‑97 (MQ=255)
                                                cTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAATCGCTAtctgagtc                                                >  2:684411/1‑97 (MQ=255)
                                                 tGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTAtctgagtct                                               >  2:1550342/1‑97 (MQ=255)
                                                    ttCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGACTCGCTGTCTGAGTCTGAATCGCTAtctgagtctgag                                            >  1:1070371/1‑97 (MQ=255)
                                                     tctgagtcgctgtctgagtctgagtcgctgtctgagTCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTatctgaatctgact                                           <  2:167213/97‑3 (MQ=255)
                                                      ctgagtcgctgtctgagtctgagtcgctgtctgagtCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCtgagtctgagtc                                          <  1:1311268/97‑1 (MQ=255)
                                                         agtcgctgtctgagtctgagtcgctgtctgagtctgAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACt                                       <  2:886863/97‑1 (MQ=255)
                                                         agtcgctgtctgagtctgagtcgctgtctgagtctgAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACt                                       <  1:894357/97‑1 (MQ=255)
                                                         agtcgctgtctgagtctgagtcgctgtctgagtctgAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACt                                       <  1:2328917/97‑1 (MQ=255)
                                                          gtcgctgtctgagtctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTg                                      <  1:772846/97‑1 (MQ=255)
                                                           tcgctgtctgagtctgaatcgctgtctgagtctgaaTCGCTGtctgaa                                                                                      <  2:1426723/48‑1 (MQ=255)
                                                             gctgtctgagtctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCt                                   >  1:479636/1‑97 (MQ=255)
                                                             gctgtctgagtctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCt                                   >  1:1972736/1‑97 (MQ=255)
                                                              ctgtctgagtctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAATCCGAATCGCTATCTGAACCTGAGTCGCTGTCTg                                  <  2:2210695/97‑1 (MQ=11)
                                                               tgtctgagtctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGa                                 <  1:59614/97‑1 (MQ=255)
                                                                gtctgagtctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGaa                                <  1:397040/97‑1 (MQ=255)
                                                                gtctgagtctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGaa                                >  2:356851/1‑97 (MQ=255)
                                                                 tctgagtctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAAt                               >  1:564027/1‑97 (MQ=255)
                                                                  ctgagtctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATc                              >  1:1797015/1‑97 (MQ=255)
                                                                   tgagtctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCt                             <  1:640675/97‑1 (MQ=255)
                                                                   tgagtctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCt                             <  1:1720469/97‑1 (MQ=255)
                                                                       tctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACt                         <  2:837658/97‑1 (MQ=255)
                                                                       tctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACt                         <  1:1884413/97‑1 (MQ=255)
                                                                       tctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACt                         <  1:1619628/97‑1 (MQ=255)
                                                                        ctgagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTc                        >  2:1828582/1‑97 (MQ=255)
                                                                          gagtcgctgtctgagtctgaGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCAc                      <  2:2041958/97‑1 (MQ=255)
                                                                          gagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCAc                      <  2:2451307/97‑1 (MQ=255)
                                                                          gagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCAc                      <  1:1044039/97‑1 (MQ=255)
                                                                          gagtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCAc                      <  1:1759028/97‑1 (MQ=255)
                                                                           agtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACt                     <  2:175240/97‑1 (MQ=255)
                                                                            gtcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTa                    <  1:2524338/97‑1 (MQ=255)
                                                                             tcgctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTat                   <  1:1193319/97‑1 (MQ=255)
                                                                               gctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatct                 >  1:670847/1‑97 (MQ=255)
                                                                               gctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGACTCCCGatct                 >  1:824400/1‑97 (MQ=14)
                                                                                ctgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctg                <  1:1182114/97‑1 (MQ=255)
                                                                                 tgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctga               <  1:2010895/97‑1 (MQ=255)
                                                                                 tgtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctga               <  2:383283/97‑1 (MQ=255)
                                                                                  gtctgagtctgaGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctgaa              <  2:1305806/97‑1 (MQ=255)
                                                                                  gtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAATCTGGCTCACTatctgag              >  2:2580026/1‑96 (MQ=14)
                                                                                  gtctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctgaa              <  1:356368/97‑1 (MQ=255)
                                                                                   tctgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctgaat             <  1:1329110/97‑1 (MQ=255)
                                                                                     tgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctgaatct           <  1:1844718/97‑1 (MQ=255)
                                                                                     tgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctgaatct           >  1:1271337/1‑97 (MQ=255)
                                                                                     tgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctgaatct           >  2:1075464/1‑97 (MQ=255)
                                                                                     tgagtctgaATCGCTGTCTGAATCTGAATCGCTGTCCGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctgaatcc           >  1:97223/1‑96 (MQ=255)
                                                                                      gagtctgaTTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctgaatctg          <  2:97787/97‑1 (MQ=255)
                                                                                      gagtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctgaatctg          <  1:1424677/97‑1 (MQ=255)
                                                                                       agtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctgaatctga         <  1:2472384/97‑1 (MQ=255)
                                                                                       agtctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTatctgaatctga         >  1:940731/1‑97 (MQ=255)
                                                                                          ctgaATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTATCTGAATCTGAGTc      >  1:584935/1‑97 (MQ=255)
                                                                                              |                                                                                                
CTGAGTCGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCACTGTCTGAATCTGACTCACTATCTGAATCTGAGTCGCTA  >  BX571857/2700115‑2700305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: