Predicted mutation
evidence seq id position mutation freq annotation gene description
RA BX571857 1,914,095 G→A 100% V11I (GTA→ATA)  SAS1762 → putative peptidyl‑prolyl cis‑isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*BX5718571,914,0950GA96.7% 389.0 / 3.0 91V11I (GTA→ATA) SAS1762putative peptidyl‑prolyl cis‑isomerase
Reads supporting (aligned to +/- strand):  ref base G (2/1);  new base A (63/25);  total (65/26)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.49e-01
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

GATTGGTGATAATATAAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGGTAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTAAAGCTGGAGACGT  >  BX571857/1914002‑1914186
                                                                                             |                                                                                           
gattgGTGATAATATAAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATaa                                                                                          >  2:782713/1‑97 (MQ=255)
  ttgGTGATAATATAAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACa                                                                                        >  1:2646743/1‑97 (MQ=255)
      tGATAATATAAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTa                                                                                    >  2:275029/1‑97 (MQ=255)
      tGATAATATAAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTa                                                                                    >  1:1225217/1‑97 (MQ=255)
        ataataTAAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGt                                                                                  >  2:2502452/1‑97 (MQ=255)
         taataTAAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGGTAACAGCTAGTg                                                                                 >  1:489814/1‑97 (MQ=255)
          aataTAAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGc                                                                                >  1:346667/1‑97 (MQ=255)
           atatAAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCt                                                                               >  1:2219465/1‑97 (MQ=255)
            tataAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCtt                                                                              <  2:813890/97‑1 (MQ=255)
             ataAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCttt                                                                             >  2:454898/1‑97 (MQ=255)
              taAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTtta                                                                            >  1:964726/1‑97 (MQ=255)
              taAAACTATGTTATAGTCACGATGAGTAAATTACAGAGGAGATTCGGCTAAGAAAAAGAAAAACAAATTAATCGTCGCGATAACAGCCAGTGCAtta                                                                            >  2:1885864/1‑97 (MQ=255)
                aaaCTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTttatt                                                                          >  1:758055/1‑97 (MQ=255)
                aaaCTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTttatt                                                                          >  2:596225/1‑97 (MQ=255)
                aaaCTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTttatt                                                                          >  2:1023903/1‑97 (MQ=255)
                aaaCTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTttatt                                                                          >  2:454502/1‑97 (MQ=255)
                  aCTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTttattat                                                                        >  1:811086/1‑97 (MQ=255)
                    tATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTttattatta                                                                      >  2:2169254/1‑97 (MQ=255)
                    tATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTttattatta                                                                      >  2:2659549/1‑97 (MQ=255)
                     aTGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAg                                                                     >  2:1546754/1‑97 (MQ=255)
                      tGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAgg                                                                    >  1:1315595/1‑97 (MQ=255)
                      tGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAgg                                                                    >  2:1357354/1‑97 (MQ=255)
                      tGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAgg                                                                    >  1:859051/1‑97 (MQ=255)
                        ttATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGgcg                                                                  >  1:2419494/1‑97 (MQ=255)
                         tataTTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGgcgc                                                                 >  2:1469732/1‑97 (MQ=255)
                           tatTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTCATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCtt                                                               >  2:1664695/1‑97 (MQ=255)
                           tatTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCtt                                                               >  1:1424541/1‑97 (MQ=255)
                           tatTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCtt                                                               <  1:1353811/97‑1 (MQ=255)
                             ttCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGGTAACAGCTAGTGCTTTATTATTAGGCGCTtgt                                                             >  2:2344871/1‑97 (MQ=255)
                               cACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTgg                                                           >  2:2318334/1‑97 (MQ=255)
                               cACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTgg                                                           >  1:1641939/1‑97 (MQ=255)
                                   atgatTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCt                                                       <  1:1577831/97‑1 (MQ=255)
                                    tgatTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTa                                                      >  2:1844128/1‑97 (MQ=255)
                                    tgatTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTa                                                      >  1:1132081/1‑97 (MQ=255)
                                     gatTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAg                                                     >  2:1345409/1‑97 (MQ=255)
                                      atTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGt                                                    >  1:1263994/1‑97 (MQ=255)
                                      atTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGATAGt                                                    >  2:251280/1‑97 (MQ=255)
                                        tAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGc                                                  >  1:1759982/1‑97 (MQ=255)
                                        tAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGc                                                  <  1:174722/97‑1 (MQ=255)
                                        tAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCCTGAGGCGCTAGTGc                                                  >  2:2348024/1‑97 (MQ=255)
                                         aaCTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGcc                                                 >  1:1217630/1‑97 (MQ=255)
                                          aCTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCca                                                <  1:1322696/97‑1 (MQ=255)
                                            ttACAAAGGAGTTTCAACTATGAAGATGATACACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCcaca                                              >  2:1780021/1‑97 (MQ=255)
                                            ttACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCcaca                                              >  1:821640/1‑97 (MQ=255)
                                            ttACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCcaca                                              >  2:2233729/1‑97 (MQ=255)
                                             tACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAg                                             >  1:809527/1‑97 (MQ=255)
                                             tACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAg                                             <  1:1512064/97‑1 (MQ=255)
                                             tACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTAGTAGGCGCTTGTGGCGCTAGTGCCACAg                                             <  2:1399963/97‑1 (MQ=255)
                                               cAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGAc                                           >  2:2197242/1‑97 (MQ=255)
                                                 aaGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGActc                                         >  2:2117457/1‑97 (MQ=255)
                                                   ggAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTa                                       >  1:923320/1‑97 (MQ=255)
                                                    gAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTaa                                      >  2:2373142/1‑97 (MQ=255)
                                                    gAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTaa                                      >  1:1750946/1‑97 (MQ=255)
                                                     aGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTaaa                                     <  1:1226784/97‑1 (MQ=255)
                                                      gTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAg                                    >  1:889166/1‑97 (MQ=255)
                                                            aCTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATa                              <  1:1069094/97‑1 (MQ=255)
                                                            aCTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATa                              <  1:2611184/97‑1 (MQ=255)
                                                            aCTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATa                              <  1:2611508/97‑1 (MQ=255)
                                                             cTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATAc                             <  2:604645/97‑1 (MQ=255)
                                                             cTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATAc                             <  2:1850184/97‑1 (MQ=255)
                                                             cTATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATAc                             >  1:2284299/1‑97 (MQ=255)
                                                              tATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACa                            <  1:2380533/97‑1 (MQ=255)
                                                              tATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACa                            >  1:2512332/1‑97 (MQ=255)
                                                              tATGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACa                            >  2:2300498/1‑97 (MQ=255)
                                                                tGAAGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACAtt                          <  1:2660160/97‑1 (MQ=255)
                                                                  aaGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTaa                        <  2:1750869/97‑1 (MQ=255)
                                                                   aGATGATAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAAt                       >  1:963167/1‑97 (MQ=255)
                                                                    gatgatAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAAtt                      >  1:1292718/1‑97 (MQ=255)
                                                                    gatgatAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAAtt                      >  1:1505418/1‑97 (MQ=255)
                                                                      tgatAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATttc                    >  2:678889/1‑97 (MQ=255)
                                                                      tgatAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATttc                    >  1:719299/1‑97 (MQ=255)
                                                                        atAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATttctt                  <  2:1251521/97‑1 (MQ=255)
                                                                        atAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATttctt                  <  2:1251089/97‑1 (MQ=255)
                                                                         tAAACAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATttcttc                 >  1:429308/1‑97 (MQ=255)
                                                                           aaCAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTa               >  1:2429120/1‑97 (MQ=255)
                                                                            aCAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTaa              <  2:773463/97‑1 (MQ=255)
                                                                             cAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTaaa             <  1:338821/97‑1 (MQ=255)
                                                                             cAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTaaa             >  2:2332238/1‑97 (MQ=255)
                                                                             cAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTaaa             <  1:1631691/97‑1 (MQ=255)
                                                                             cAAATTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTaaa             >  2:119737/1‑97 (MQ=255)
                                                                              aaaTTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTAAAg            >  2:748425/1‑97 (MQ=255)
                                                                               aaTTAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTAAAGc           <  1:1039219/97‑1 (MQ=255)
                                                                                aTTAATCGTTCCGATAACCGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCCAGAGCCACCGCCTCTAAAGAACATACATTACTTTCTTCCAAACCt          >  2:2610223/1‑97 (MQ=255)
                                                                                  tAATCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTAAAGCTgg        >  1:1710657/1‑97 (MQ=255)
                                                                                   aaTCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTAAAGCTGga       >  2:1584495/1‑97 (MQ=255)
                                                                                    aTCGTTCCGGTAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTAAAGCTGgag      <  2:244384/97‑1 (MQ=255)
                                                                                    aTCGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTAAAGCTGgag      <  2:731694/97‑1 (MQ=255)
                                                                                      cGTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTAAAGCTGGAGAc    >  2:1856478/1‑97 (MQ=255)
                                                                                       gTTCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTAAAGCTGGAGACg   >  1:1394673/1‑97 (MQ=255)
                                                                                        ttCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTAAAGCTGGAGACGt  <  2:66743/97‑1 (MQ=255)
                                                                                        ttCCGATAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTAAAGCTGGAGACGt  <  1:712323/97‑1 (MQ=255)
                                                                                             |                                                                                           
GATTGGTGATAATATAAAACTATGTTATATTCACGATGATTAACTTACAAAGGAGTTTCAACTATGAAGATGATAAACAAATTAATCGTTCCGGTAACAGCTAGTGCTTTATTATTAGGCGCTTGTGGCGCTAGTGCCACAGACTCTAAAGAAAATACATTAATTTCTTCTAAAGCTGGAGACGT  >  BX571857/1914002‑1914186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: