New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? BX571858 1 =0 (0.000)132 (1.060) 80/170 NT 100% intergenic (–/‑11) –/pSAS01 –/putative ABC transporter ATP binding protein
?BX571858 = 20651 0 (0.000)intergenic (+5/–) pSAS24/– putative exported protein/–

Only 100 of 139 total aligned reads displayed.

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGAAAAT  >  BX571858/1‑96
                                                                                                |                                                                                               
gatcctacaaaagaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgag                                                                                                 >  1:854778‑M1/97‑97 (MQ=255)
      acaaaagaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGAcc                                                                                           >  1:2043927‑M1/91‑97 (MQ=255)
       caaaagaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCg                                                                                          >  1:2473620‑M1/90‑97 (MQ=255)
           agaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAg                                                                                      <  2:1496892‑M1/12‑1 (MQ=255)
           agaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAg                                                                                      <  1:2024047‑M1/12‑1 (MQ=255)
           agaatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAg                                                                                      <  1:56212‑M1/12‑1 (MQ=255)
             aatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTg                                                                                    >  1:1443412‑M1/84‑97 (MQ=255)
             aatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTg                                                                                    <  2:1066649‑M1/14‑1 (MQ=255)
             aatatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTg                                                                                    >  1:2367400‑M1/84‑97 (MQ=255)
              atatgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGa                                                                                   >  1:335597‑M1/83‑97 (MQ=255)
                atgtgaaagtaaatcataaagggaaacatgtgcgttcgatagaatacattacacaagatattcctagctttttaaaatgaGGTGACCGATAGTGATa                                                                                 <  2:59126‑M1/17‑1 (MQ=255)
                 tgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATaa                                                                                <  2:2001172‑M1/18‑1 (MQ=255)
                 tgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATaa                                                                                >  1:2530450‑M1/80‑97 (MQ=255)
                 tgtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATaa                                                                                >  1:308465‑M1/80‑97 (MQ=255)
                  gtgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATaaa                                                                               >  2:392418‑M1/79‑97 (MQ=255)
                   tgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATaaaa                                                                              >  1:371542‑M1/78‑97 (MQ=255)
                   tgaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATaaaa                                                                              <  2:258045‑M1/20‑1 (MQ=255)
                   ggaaagtaaatcataaagggaaatatgtgcgttcgatagaacacattacaaaagatattcctagctttttaaaatgaGGTGACCGCTAGTGATaaaa                                                                              <  2:1156009‑M1/20‑1 (MQ=255)
                    gaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAAc                                                                             <  2:491198‑M1/21‑1 (MQ=255)
                    gaaagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAAc                                                                             >  1:68783‑M1/77‑97 (MQ=255)
                      aagtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACtt                                                                           >  2:950218‑M1/75‑97 (MQ=255)
                       agtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTg                                                                          >  2:684721‑M1/74‑97 (MQ=255)
                       agtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTg                                                                          <  2:1520038‑M1/24‑1 (MQ=255)
                        gtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGa                                                                         <  1:445996‑M1/25‑1 (MQ=255)
                        gtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGa                                                                         <  1:2297398‑M1/25‑1 (MQ=255)
                        gtaaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGa                                                                         <  1:1086852‑M1/25‑1 (MQ=255)
                         taaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGaa                                                                        <  2:2221723‑M1/26‑1 (MQ=255)
                         taaatcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTGGaa                                                                        >  2:706888‑M1/72‑97 (MQ=255)
                             tcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATg                                                                    <  1:1823646‑M1/30‑1 (MQ=255)
                             tcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATg                                                                    <  1:1447416‑M1/30‑1 (MQ=255)
                             tcataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATg                                                                    >  1:262157‑M1/68‑97 (MQ=255)
                              cataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGt                                                                   <  1:834909‑M1/31‑1 (MQ=255)
                              cataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGt                                                                   >  1:1133111‑M1/67‑97 (MQ=255)
                              cataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGt                                                                   <  2:191293‑M1/31‑1 (MQ=255)
                              cataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGt                                                                   <  1:1791028‑M1/31‑1 (MQ=255)
                               ataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGtt                                                                  >  2:2549085‑M1/66‑97 (MQ=255)
                               ataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGtt                                                                  >  2:1511058‑M1/66‑97 (MQ=255)
                               ataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGtt                                                                  <  2:371013‑M1/32‑1 (MQ=255)
                               ataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGtt                                                                  <  1:1805076‑M1/32‑1 (MQ=255)
                               ataaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGtt                                                                  >  1:1090502‑M1/66‑97 (MQ=255)
                                taaagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGttt                                                                 >  2:825179‑M1/65‑97 (MQ=255)
                                  aagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAatgttctt                                                               <  2:2125337‑M1/35‑4 (MQ=255)
                                  aagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGttttt                                                               <  2:507914‑M1/35‑1 (MQ=255)
                                  aagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGttttt                                                               >  2:733768‑M1/63‑97 (MQ=255)
                                  aagggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACAGATAGTGATAAAACTTGAAAATGttttt                                                               <  2:97214‑M1/35‑1 (MQ=255)
                                    gggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGt                                                             <  1:208658‑M1/37‑1 (MQ=255)
                                     ggaaatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTa                                                            >  2:431020‑M1/60‑97 (MQ=255)
                                        aatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTaaaa                                                         <  2:220091‑M1/41‑1 (MQ=255)
                                        aatatgtgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGAGATAAAACTTGAAAATGTTTTTGTaaaa                                                         <  2:1738228‑M1/41‑1 (MQ=255)
                                              tgcgttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGt                                                   <  2:1198896‑M1/47‑1 (MQ=255)
                                                cgttcgatagaatacattacaaaagatattcctagcgttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGtaa                                                 >  1:1198541‑M1/49‑97 (MQ=255)
                                                 gttcgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGtaat                                                >  1:1699915‑M1/48‑97 (MQ=255)
                                                    cgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATaaa                                             <  2:1035477‑M1/53‑1 (MQ=255)
                                                    cgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATaaa                                             >  2:1991443‑M1/45‑97 (MQ=255)
                                                    cgatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATaaa                                             >  2:1849139‑M1/45‑97 (MQ=255)
                                                     gatagaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATaaaa                                            >  1:812945‑M1/44‑97 (MQ=255)
                                                        agaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACa                                         <  1:468874‑M1/57‑1 (MQ=255)
                                                         gaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACAt                                        >  2:1394478‑M1/40‑97 (MQ=255)
                                                         gaatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACAt                                        <  2:1424904‑M1/58‑1 (MQ=255)
                                                          aatacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACAtt                                       <  2:1012649‑M1/59‑1 (MQ=255)
                                                            tacattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAACATGTTTTTGTAAAAAAAGGTAATAAACACAtttt                                     <  2:1665515‑M1/61‑1 (MQ=255)
                                                             acattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTa                                    >  2:890896‑M1/36‑97 (MQ=255)
                                                             acattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTa                                    >  2:1953525‑M1/36‑97 (MQ=255)
                                                             acattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTa                                    <  2:2269664‑M1/62‑1 (MQ=255)
                                                             acattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTa                                    >  1:248569‑M1/36‑97 (MQ=255)
                                                             acattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTa                                    >  1:2003713‑M1/36‑97 (MQ=255)
                                                             acattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTa                                    >  1:1868072‑M1/36‑97 (MQ=255)
                                                             acattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTa                                    >  1:1693304‑M1/36‑97 (MQ=255)
                                                              cattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAACCTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAg                                   >  1:2238569‑M1/35‑97 (MQ=255)
                                                              cattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAg                                   >  1:2238505‑M1/35‑97 (MQ=255)
                                                              cattacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAg                                   >  2:1894552‑M1/35‑97 (MQ=255)
                                                              cattacaaaagaaatacctagcattataaaatgaGGAGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAg                                   <  2:191069‑M1/63‑1 (MQ=255)
                                                               attacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTTTTTATTTAGGTAATAAAAACATTTTAGa                                  <  2:1469493‑M1/64‑1 (MQ=255)
                                                               attacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGa                                  <  1:1272362‑M1/64‑1 (MQ=255)
                                                                ttacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGAc                                 <  2:1692676‑M1/65‑1 (MQ=255)
                                                                ttacaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGAc                                 <  2:1539933‑M1/65‑1 (MQ=255)
                                                                  acaaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACgg                               >  2:2475563‑M1/31‑97 (MQ=255)
                                                                   caaaagatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGa                              >  1:481559‑M1/30‑97 (MQ=255)
                                                                    aaaagatattcctagctttttaacatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGAt                             <  2:2317758‑M1/69‑1 (MQ=255)
                                                                       agatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTa                          <  1:155995‑M1/72‑1 (MQ=255)
                                                                        gatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTaa                         <  2:821755‑M1/73‑1 (MQ=255)
                                                                        gatattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTaa                         >  2:664466‑M1/25‑97 (MQ=255)
                                                                         atattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAAc                        <  1:1559194‑M1/74‑1 (MQ=255)
                                                                         atattcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGAAGGATGtaaa                        <  2:1556691‑M1/74‑2 (MQ=255)
                                                                           attcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACtt                      >  2:2561509‑M1/22‑97 (MQ=255)
                                                                            ttcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACttt                     >  2:1682818‑M1/21‑97 (MQ=255)
                                                                            ttcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACttt                     >  2:1038217‑M1/21‑97 (MQ=255)
                                                                            ttcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACttt                     <  1:995650‑M1/77‑1 (MQ=255)
                                                                             tcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTa                    >  1:1310012‑M1/20‑97 (MQ=255)
                                                                             tcctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTa                    >  1:1192990‑M1/20‑97 (MQ=255)
                                                                              cctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTaa                   >  1:2151283‑M1/19‑97 (MQ=255)
                                                                              cctagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTaa                   >  1:314465‑M1/19‑97 (MQ=255)
                                                                                tagctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAAtt                 >  2:1960713‑M1/17‑97 (MQ=255)
                                                                                 agctttttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAAttt                <  1:639939‑M1/82‑1 (MQ=255)
                                                                                      tttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGaaa           <  1:1214360‑M1/87‑1 (MQ=255)
                                                                                       ttaaaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGaaaa          <  1:2326992‑M1/88‑1 (MQ=255)
                                                                                          aaatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAgg       >  1:1387935‑M1/7‑97 (MQ=255)
                                                                                           aatgaGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGa      >  1:2559626‑M1/6‑97 (MQ=255)
                                                                                               aGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGAAAAt  <  2:2544340‑M1/96‑1 (MQ=255)
                                                                                               aGGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGAAAAt  <  2:1927160‑M1/96‑1 (MQ=255)
                                                                                                |                                                                                               
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGACCGATAGTGATAAAACTTGAAAATGTTTTTGTAAAAAAAGGTAATAAAAACATTTTAGACGGATGTAACTTTAATTTTGAAAAAGGAAAAT  >  BX571858/1‑96

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.