| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 549,806 | A→G | 100% | intergenic (‑141/‑17) | SAS0478 ← / → SAS0479 | nucleoside permease/putative DNA‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 549,806 | 0 | A | G | 100.0% | 772.3 / ‑6.5 | 176 | intergenic (‑141/‑17) | SAS0478/SAS0479 | nucleoside permease/putative DNA‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (120/55); total (120/56) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 180 total aligned reads displayed.
ATGGAAGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTGAAA > BX571857/549713‑549898 | aTGGAAGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCgaaa < 1:1501479/97‑1 (MQ=255) tGGAAGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCgaaaa > 1:245616/1‑97 (MQ=255) gCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGa > 2:1235476/1‑97 (MQ=255) gCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGa < 2:623873/97‑1 (MQ=255) aaCATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGatat < 2:970875/97‑1 (MQ=255) aaCATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGatat > 1:286107/1‑97 (MQ=255) catcatAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGACAAAGAAGGACGAAAAGGGGAGATATAc > 2:1894616/1‑97 (MQ=255) atcatAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACa > 1:2353543/1‑97 (MQ=255) tcatAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGAGATATACAt > 1:361568/1‑97 (MQ=255) tcatAAATTTTTGAAAACATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACAt > 1:1217887/1‑97 (MQ=255) atAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGc > 1:1835924/1‑97 (MQ=255) atAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACAAGc > 1:1408773/1‑97 (MQ=255) tAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGca > 1:1660047/1‑97 (MQ=255) aaaTTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGcac > 1:1338195/1‑97 (MQ=255) aaTTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGcaca > 1:131352/1‑97 (MQ=255) aTTTTTGAAAATATAAAAACAAATTACGTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGAGTGATATACATGCACaa < 2:543505/97‑1 (MQ=255) aTTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACaa < 2:8121/97‑1 (MQ=255) aTTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACaa < 2:2414396/97‑1 (MQ=255) tttttGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAat > 1:2135379/1‑97 (MQ=255) ttttGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAata < 2:1747073/97‑1 (MQ=255) ttttGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAata > 2:273540/1‑97 (MQ=255) tttGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAatat > 1:428895/1‑97 (MQ=255) ttaaaaaTATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATg < 2:459976/94‑1 (MQ=255) ttGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATg > 1:1483602/1‑97 (MQ=255) tGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGt < 2:1454723/97‑1 (MQ=255) aaTATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGa > 2:1082738/1‑97 (MQ=255) atatAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGAc > 1:2206528/1‑97 (MQ=255) ataAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGAcat < 1:1070723/97‑1 (MQ=255) taAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGAcatc > 1:2532851/1‑97 (MQ=255) aaaCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATa < 1:722287/97‑1 (MQ=255) aaCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAg > 2:1527473/1‑97 (MQ=255) aaCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAg > 1:226189/1‑97 (MQ=255) aCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGa > 2:1724583/1‑97 (MQ=255) aCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGa > 2:2516617/1‑97 (MQ=255) cAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGaa > 2:1959061/1‑97 (MQ=255) cAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATAAATGCACAATATGTCTGACATCATAGaa > 1:2418734/1‑97 (MQ=255) aaaTTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAAc < 2:698282/97‑1 (MQ=255) aaaTTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAAc < 1:939164/97‑1 (MQ=255) attaattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACaa > 2:1854838/1‑97 (MQ=255) taattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATa > 2:157311/1‑97 (MQ=255) taattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATa > 1:572864/1‑97 (MQ=255) taattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGCCTGACATCATAGAACAATa > 1:1350427/1‑97 (MQ=255) aattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATAc > 1:1219238/1‑97 (MQ=255) tGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATc > 2:898455/1‑97 (MQ=255) tGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATc < 2:2072805/97‑1 (MQ=255) gAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCa > 2:757992/1‑97 (MQ=255) gAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCa > 2:523781/1‑97 (MQ=255) aaaaaGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCaa > 1:1048395/1‑97 (MQ=255) aaaaaGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCaa < 1:432018/97‑1 (MQ=255) aaGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACg > 1:568942/1‑97 (MQ=255) aaGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACg < 1:543995/97‑1 (MQ=255) aaGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACg < 2:300493/97‑1 (MQ=255) aGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGt > 2:218161/1‑97 (MQ=255) ggTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGtt < 2:1507459/97‑1 (MQ=255) tCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTa > 2:2373535/1‑97 (MQ=255) tCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTa < 1:209600/97‑1 (MQ=255) cAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTAt > 2:320999/1‑97 (MQ=255) cAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTAt > 1:1691565/1‑97 (MQ=255) aaaaTAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTAtt > 2:1120012/1‑97 (MQ=255) aaaaTAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTAtt > 1:1272704/1‑97 (MQ=255) aaaaTAGGTCATATAAAATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTAtt > 2:1385674/1‑97 (MQ=255) aTAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGa > 2:282081/1‑97 (MQ=255) tAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGaa > 1:884066/1‑97 (MQ=255) tAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGaa > 1:557762/1‑97 (MQ=255) aGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAag > 2:162795/1‑97 (MQ=255) aGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAag < 2:1776649/97‑1 (MQ=255) aGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAag < 2:1880446/97‑1 (MQ=255) aGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAag < 1:844744/97‑1 (MQ=255) ggTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAaga < 1:1048509/97‑1 (MQ=255) ggTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAaga < 1:1522162/97‑1 (MQ=255) ggTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAaga < 2:798374/97‑1 (MQ=255) ggTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAaga > 1:2059906/1‑97 (MQ=255) ggTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTCGAaga > 2:1979769/1‑97 (MQ=255) gTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAagag < 1:1203590/97‑1 (MQ=255) gTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAagag < 1:466294/97‑1 (MQ=255) gTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAagag < 1:466302/97‑1 (MQ=255) tCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGt > 2:1318258/1‑97 (MQ=255) tCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGt > 1:1865136/1‑97 (MQ=255) tCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGt > 2:1146912/1‑97 (MQ=255) tCATATAATATAGTCAAAGAAGGTCGAAAAGGGGGGATATACATGCACAATATGTCTGACAGCATAGAACAATACATCAAACGCTTATTTGAAGAGt > 2:2422313/1‑97 (MQ=255) cATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTc > 2:1546235/1‑97 (MQ=255) cATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTc > 2:2151978/1‑97 (MQ=255) cATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTc > 1:2573947/1‑97 (MQ=255) taatataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTTGAAt > 2:556554/1‑97 (MQ=255) taatataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAAt < 1:317873/97‑1 (MQ=255) taatataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAAt > 1:2260921/1‑97 (MQ=255) aatataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATg < 2:1071439/97‑1 (MQ=255) atataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGa > 2:771865/1‑97 (MQ=255) atataGTCAAAGAAGGACGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGa > 2:2387452/1‑97 (MQ=255) ataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAg > 1:1743494/1‑97 (MQ=255) ataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAg > 1:1720279/1‑97 (MQ=255) ataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAg < 1:298269/97‑1 (MQ=255) ataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATCTGAAGAGTCGAATGAAg > 1:928513/1‑97 (MQ=255) taGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGa > 1:205525/1‑97 (MQ=255) taGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGa > 1:2391223/1‑97 (MQ=255) gTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAGAAGGGTATTTGAAGAGTCGAATGAAGATg > 2:2149933/1‑97 (MQ=255) gTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATg > 1:237762/1‑97 (MQ=255) gTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATg > 1:523439/1‑97 (MQ=255) aaaGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCg > 2:2463962/1‑97 (MQ=255) gaagGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTg > 1:649648/1‑97 (MQ=255) | ATGGAAGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTGAAA > BX571857/549713‑549898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |