| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 549,806 | A→G | 70.5% | intergenic (‑141/‑17) | SAS0478 ← / → SAS0479 | nucleoside permease/putative DNA‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 549,806 | 0 | A | G | 70.5% | 424.5 / 267.9 | 247 | intergenic (‑141/‑17) | SAS0478/SAS0479 | nucleoside permease/putative DNA‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (48/25); new base G (103/71); total (151/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.08e-01 | |||||||||||
Only 100 of 254 total aligned reads displayed.
AAAATGGAAGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTGAAATT > BX571857/549710‑549900 | aaaaTGGAAGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCa > 2:2513669/1‑97 (MQ=255) aTGGAAGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGACAAAATAGGTCATATAATATAGTCAAAGAAGGTCgaaa > 1:1659934/1‑97 (MQ=255) tGGAAGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCgaaaa > 1:3097373/1‑97 (MQ=255) tGGAAGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCaaaaa > 1:2890915/1‑97 (MQ=255) gAAGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAgg < 1:1561076/97‑1 (MQ=255) aGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAgggg > 1:1309067/1‑97 (MQ=255) aGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAgggg > 1:193184/1‑97 (MQ=255) ggCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTg > 1:1182519/1‑97 (MQ=255) ggCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTg < 1:2247382/97‑1 (MQ=255) gCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGgaga > 1:27124/1‑97 (MQ=255) cTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGat > 2:393468/1‑97 (MQ=255) aCATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGAtata > 2:407399/1‑97 (MQ=255) atcatAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACa < 1:1687328/97‑1 (MQ=255) atcatAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACa > 2:3028311/1‑97 (MQ=255) atcatAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACa > 2:1351317/1‑97 (MQ=255) catAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATg > 1:2117167/1‑97 (MQ=255) catAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATg > 1:1656775/1‑97 (MQ=255) atAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGc > 2:2422288/1‑97 (MQ=255) tAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGca < 1:3193716/97‑1 (MQ=255) aaaTTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGcac < 2:2268008/97‑1 (MQ=255) aaaTTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGcac < 2:566209/97‑1 (MQ=255) aaaTTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGcac < 2:1516429/97‑1 (MQ=255) aaTTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGcaca > 1:915473/1‑97 (MQ=255) aaTTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGcaca > 2:3343341/1‑97 (MQ=255) aTTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACaa < 1:1252674/97‑1 (MQ=255) ttttGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAata > 1:2919910/1‑97 (MQ=255) tttGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAatat > 1:2775248/1‑97 (MQ=255) ttGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATg < 2:1194939/97‑1 (MQ=255) ttGAAAATATAAAAACAAATTAATTGAAAAAGGGCAAAATAGGTCATATAATATAGTCAAAGCAGGTCAAAAAGGGGTGATATACAGGCACAATATg > 2:2884372/1‑97 (MQ=255) tGAAAATATAAAACCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATCGTCAAAGAAGGTCGAAAAGGGGAGATATACATGCACAATATGt < 1:834295/97‑1 (MQ=255) tGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGt > 2:422388/1‑97 (MQ=255) aaaaTATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCt < 2:2632691/97‑1 (MQ=255) aaaaTATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCt > 1:1865674/1‑97 (MQ=255) tataAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGAca > 2:2865022/1‑97 (MQ=255) aaaaaCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGAcatca > 2:2494821/1‑97 (MQ=255) aaaaCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGAcatcat > 2:3185336/1‑97 (MQ=255) aaaaCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGAcatcat > 1:1772380/1‑97 (MQ=255) aaCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAg > 2:702107/1‑97 (MQ=255) aaCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAg < 1:2296940/97‑1 (MQ=255) aaCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAg > 2:1883194/1‑97 (MQ=255) aCAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGa > 2:2093538/1‑97 (MQ=255) aaaTTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAAc > 2:2329362/1‑97 (MQ=255) aaaTTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAAc < 2:1566890/97‑1 (MQ=255) aaaTTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAAc > 2:2694292/1‑97 (MQ=255) aattaattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCCCAATATGTCTGACATCATAGAACa > 2:1925387/1‑97 (MQ=255) aattaattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACa > 2:597160/1‑97 (MQ=255) ttaattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAAt > 1:779352/1‑97 (MQ=255) ttaattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAAt < 1:1721925/97‑1 (MQ=255) ttaattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAAt > 2:2259196/1‑97 (MQ=255) ttaattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAAt > 1:1955290/1‑97 (MQ=255) taattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATa < 1:1171815/97‑1 (MQ=255) taattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATa < 1:2648374/97‑1 (MQ=255) aattGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATAc > 2:1259730/1‑97 (MQ=255) attGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACa < 2:2386051/97‑1 (MQ=255) attGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACa > 2:3041717/1‑97 (MQ=255) gAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCa > 1:411021/1‑97 (MQ=255) gAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCa > 1:2063415/1‑97 (MQ=255) gAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCa > 1:2987565/1‑97 (MQ=255) gAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCa > 2:2998120/1‑97 (MQ=255) aaaaGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCaaa < 1:372189/97‑1 (MQ=255) aaaaGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCaaa < 2:785902/97‑1 (MQ=255) aaGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACg > 1:3323663/1‑97 (MQ=255) aaGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACg > 2:2372192/1‑97 (MQ=255) aaGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACg < 1:2166256/97‑1 (MQ=255) aaGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACg > 2:515341/1‑97 (MQ=255) ggTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGtt < 2:1782473/97‑1 (MQ=255) gTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGttt > 1:938577/1‑97 (MQ=255) aaaaTAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTAtt > 2:1093248/1‑97 (MQ=255) aaTAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTg > 2:1250715/1‑97 (MQ=255) aTAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGa > 1:1154471/1‑97 (MQ=255) aTAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGa > 1:1499221/1‑97 (MQ=255) tAGGTCATATAATATAGTCAAAGCAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCAGAGAACAATACATCAAACGTTTATTTgca > 2:2154335/1‑95 (MQ=255) tAGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGaa > 2:3112691/1‑97 (MQ=255) aGGTCATATAATATAGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGCACAATACATCAAACGTTTATTTGAag > 1:2941722/1‑97 (MQ=255) atataatataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCg > 1:2900001/1‑97 (MQ=255) tataatataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGACGa > 2:1144160/1‑97 (MQ=255) ataatataGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGaa > 2:2604109/1‑97 (MQ=255) taatataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTAGTTGAAGAGTCGCAt > 2:1736752/1‑97 (MQ=255) taatataGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAAt > 2:1438805/1‑97 (MQ=255) taatataGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAAt > 1:2594707/1‑97 (MQ=255) aatataGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATg < 1:1131619/97‑1 (MQ=255) tataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGaa > 1:591248/1‑97 (MQ=255) tataGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGaa < 2:2058358/97‑1 (MQ=255) taGTCAAAGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGa > 2:2811455/1‑97 (MQ=255) gTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATg > 1:2208660/1‑97 (MQ=255) gTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATg < 2:1850708/97‑1 (MQ=255) cAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTc > 2:65172/1‑97 (MQ=255) aaaGTAGTTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACTATACATCATACGTTTATTCGAATAGTCGAATGATGATGTCg > 2:163061/1‑97 (MQ=255) aaaGAAGGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCg > 1:2954233/1‑97 (MQ=255) aaaGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCg > 1:640468/1‑97 (MQ=255) aaaGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCg > 1:2685808/1‑97 (MQ=255) aagaagGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGt > 2:1008578/1‑97 (MQ=255) gaagGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTg > 1:2482425/1‑97 (MQ=255) gaagGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTg > 2:2016162/1‑97 (MQ=255) gaagGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTg > 2:2301616/1‑97 (MQ=255) aagGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTGa < 1:2457782/97‑1 (MQ=255) aagGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTGa > 2:1105482/1‑97 (MQ=255) aagGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTGa < 1:2012770/97‑1 (MQ=255) agGTCGAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGCTTATTTGAAGAGTCGAATGAAGATGTCGTTGaa > 2:1385457/1‑97 (MQ=255) tCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTGAAAtt < 2:2963162/97‑1 (MQ=255) | AAAATGGAAGGGCTAACATCATAAATTTTTGAAAATATAAAAACAAATTAATTGAAAAAGGTCAAAATAGGTCATATAATATAGTCAAAGAAGGTCAAAAAGGGGTGATATACATGCACAATATGTCTGACATCATAGAACAATACATCAAACGTTTATTTGAAGAGTCGAATGAAGATGTCGTTGAAATT > BX571857/549710‑549900 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |