| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 1,839,866 | T→G | 27.1% | intergenic (‑415/+60) | SAS1688 ← / ← SAS1689 | repressor of toxins/conserved hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 1,839,866 | 0 | T | G | 27.1% | 226.8 / 113.8 | 121 | intergenic (‑415/+60) | SAS1688/SAS1689 | repressor of toxins/conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (71/17); new base G (27/6); total (98/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
CCGAATGAGGCTAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTCAACAATAA > BX571857/1839770‑1839960 | ccGAATGAGGCTAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATtct > 2:2845481/1‑97 (MQ=255) gAATGAGGCTAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCa > 1:140317/1‑97 (MQ=255) aaTGAGGCTAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCaa > 1:986334/1‑97 (MQ=255) aaTGAGGCTAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCaa > 1:1562463/1‑97 (MQ=255) aTGAGGCTAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAAc < 2:2949557/97‑1 (MQ=255) tGAGGCTAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAAcc > 1:2225053/1‑97 (MQ=255) gCTAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTaa > 1:1112988/1‑97 (MQ=255) gCTAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTaa > 1:2421147/1‑97 (MQ=255) cTAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTaaa > 2:206488/1‑97 (MQ=255) cTAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTaaa > 2:1557668/1‑97 (MQ=255) tAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTaaaa > 1:1730003/1‑97 (MQ=255) tAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTaaaa > 1:1743273/1‑97 (MQ=255) tAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTaaaa > 1:322777/1‑97 (MQ=255) aaaTTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTaaaaa > 1:249889/1‑97 (MQ=255) ttGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGt > 2:1264715/1‑97 (MQ=255) ttGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGt > 1:2608685/1‑97 (MQ=255) ggTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTc > 2:1248511/1‑97 (MQ=255) ttATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTa < 2:1539845/97‑1 (MQ=255) tATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTaa > 1:581857/1‑97 (MQ=255) tttCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTaaaaaa > 2:15846/1‑97 (MQ=255) ttCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTaaaaaaa > 1:533678/1‑97 (MQ=255) gATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATg > 1:2067591/1‑97 (MQ=255) atatGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGCTgc > 2:802318/1‑96 (MQ=255) atatGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGa < 2:418589/97‑1 (MQ=255) tatGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAg > 1:838559/1‑97 (MQ=255) atGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGc > 1:1903045/1‑97 (MQ=255) tGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCa > 2:780597/1‑97 (MQ=255) tGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCa > 2:893682/1‑97 (MQ=255) tGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCa > 2:893533/1‑97 (MQ=255) tGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCa > 1:267337/1‑97 (MQ=255) aTTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATc > 1:1041788/1‑97 (MQ=255) aTTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATc > 1:2948696/1‑97 (MQ=255) tttGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCt < 2:1071493/97‑1 (MQ=255) tttGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCt < 1:2862785/97‑1 (MQ=255) tttGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCt < 1:2862792/97‑1 (MQ=255) ttGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTa > 2:753236/1‑97 (MQ=255) tGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTAc > 2:2368053/1‑97 (MQ=255) tGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTAc > 2:2239465/1‑97 (MQ=255) gTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACTTTAAAAAAGTTCTAAAAAAAATACGCGCAtcttct > 1:1564329/1‑97 (MQ=255) gTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACt < 1:2971160/97‑1 (MQ=255) tataAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTg < 2:543709/97‑1 (MQ=255) tataAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTg < 1:2060770/97‑1 (MQ=255) ataAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGt > 2:2615808/1‑97 (MQ=255) taAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGtc > 1:2955390/1‑97 (MQ=255) aaTCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGtctc > 2:2511890/1‑97 (MQ=255) aaTCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGtctc > 1:606767/1‑97 (MQ=255) aaTCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGtctc > 1:1921973/1‑97 (MQ=255) cAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATc > 2:2813304/1‑97 (MQ=255) cAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATc > 2:2733377/1‑97 (MQ=255) aaaaCATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCt > 1:2707328/1‑97 (MQ=255) aaaCATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCtt > 2:918503/1‑97 (MQ=255) aaCATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCttt > 2:1083294/1‑97 (MQ=255) aCATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCtttt < 2:868709/97‑1 (MQ=255) aCATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCtttt > 2:1880738/1‑97 (MQ=255) aCATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCACCTACTGTCCCATCtttt > 2:1299931/1‑97 (MQ=255) aCATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCtttt > 1:2362760/1‑97 (MQ=255) aTTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTa > 1:481677/1‑97 (MQ=255) aTTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTa > 1:420325/1‑97 (MQ=255) tttCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAg > 1:807474/1‑97 (MQ=255) ttCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGa > 1:1121289/1‑97 (MQ=255) ttCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGa > 1:1121220/1‑97 (MQ=255) tCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGaa > 1:1111400/1‑97 (MQ=255) cTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAat < 1:317701/97‑1 (MQ=255) aCAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATAtt > 2:1718347/1‑97 (MQ=255) caaatcaaatGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTa > 2:1817849/1‑97 (MQ=255) aaatcaaatGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTaa < 1:1172977/97‑1 (MQ=255) atcaaatGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAAt > 1:745372/1‑97 (MQ=255) atcaaatGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAAt > 2:407048/1‑97 (MQ=255) caaatGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAAttt > 1:2061939/1‑97 (MQ=255) caaatGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCGCATCTTTTTAGAATATTAAAttt > 2:473996/1‑97 (MQ=255) aaatGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTc > 1:2487675/1‑97 (MQ=255) aaatGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTc < 2:549056/97‑1 (MQ=255) aaatGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTc < 2:1491681/97‑1 (MQ=255) aaatGTGTATAAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTc < 2:2018767/97‑1 (MQ=255) aatGTGGATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGCATCTTAAATTTCt > 2:21690/1‑97 (MQ=255) atGTGTATAAAATGTGATATACATTCTAAACCTTAAAAAAGTTCTAAAAAACAGATGAGCATATCCTGTCTCACCTTTTCAGAATATTAAATCTCTa > 2:664368/1‑97 (MQ=255) tgtATAAAACGTGATATACATTCTCAACCTTACAAAAGTTCTAAAAAAAAGACGAGCATCCACTGTCCCATCTTTTTAGAATATTAAATTTCTAcca > 2:586366/1‑95 (MQ=255) tataAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAAtt > 1:299170/1‑97 (MQ=255) taAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTATTGTCTCATCCTTTTAGAATATTAAATTTCTACAATTTc > 2:1075940/1‑97 (MQ=255) taAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTc > 2:1114808/1‑97 (MQ=255) taAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTc < 2:1973923/97‑1 (MQ=255) taAAATGTGATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTc > 2:1270177/1‑97 (MQ=255) taAAATGTGATATACATTCGCAAAAATAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTc < 2:29077/97‑1 (MQ=255) aaaTGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGt > 1:1790865/1‑97 (MQ=255) aaaTGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGt < 1:840746/97‑1 (MQ=255) gtgATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATc > 1:1832815/1‑97 (MQ=255) tgATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCt > 1:1337050/1‑97 (MQ=255) gATATACATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCtt > 1:1909375/1‑97 (MQ=255) atatACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTc > 1:49673/1‑97 (MQ=255) tataCATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTca > 1:498720/1‑97 (MQ=255) tataCATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTca < 1:1008392/97‑1 (MQ=255) ataCATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTcaa > 1:1588092/1‑97 (MQ=255) aCATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTcaaca < 1:1509264/97‑1 (MQ=255) aCATTCGCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTcaaca < 1:1879796/97‑1 (MQ=255) aTTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTCAACAAt > 2:2194373/1‑97 (MQ=255) aTTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTCAACAAt > 1:1113267/1‑97 (MQ=255) ttCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTCAACAATa > 1:1344514/1‑97 (MQ=255) ttCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTCAACAATa > 1:2709906/1‑97 (MQ=255) tctcAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTCAACAATaa > 2:367558/1‑97 (MQ=255) tctcAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTCAACAATaa > 1:1077932/1‑97 (MQ=255) | CCGAATGAGGCTAAATTGGTTATTTTTCAAGATATGATTTGTATAAATCAAAACATTTCTTACAAATCAAATGTGTATAAAATGTGATATACATTCTCAACCTTAAAAAAGTTCTAAAAAAAAGATGAGCATCTACTGTCTCATCTTTTTAGAATATTAAATTTCTACAATTTCGTCATCTTCAACAATAA > BX571857/1839770‑1839960 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |