| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 416,485 | G→A | 6.4% | intergenic (+427/‑17) | SAS0368 → / → SAS0369 | hypothetical protein/putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 416,485 | 0 | G | A | 6.4% | 486.5 / 20.0 | 126 | intergenic (+427/‑17) | SAS0368/SAS0369 | hypothetical protein/putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (63/54); new base A (3/5); total (66/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 130 total aligned reads displayed.
AGTTATAAACTGGTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCGTACCAATTTCTT > BX571857/416390‑416580 | aGTTATAAACTGGTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTAcgc < 2:451419/97‑1 (MQ=255) gTTATAAACTGGTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTAcgcg < 1:783973/97‑1 (MQ=255) ttATAAACTGGTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCgg > 1:1509994/1‑97 (MQ=255) ataAACTGGTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGtt < 2:2250316/97‑1 (MQ=255) ataAACTGGTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGCAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGtt > 2:2454360/1‑97 (MQ=255) aaaCTGGTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTc < 1:2772492/97‑1 (MQ=255) aaCTGGTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCt > 1:1225190/1‑97 (MQ=255) ggTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGcc < 2:1458345/97‑1 (MQ=255) ggTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGcc < 1:2778360/97‑1 (MQ=255) ggTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGcc > 2:176873/1‑97 (MQ=255) gTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCt < 1:2361166/97‑1 (MQ=255) gTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCt < 1:1989055/97‑1 (MQ=255) tACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCtt < 1:2142576/97‑1 (MQ=255) tACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCtt < 1:12667/97‑1 (MQ=255) tACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCtt < 1:2602067/97‑1 (MQ=255) tACAAATTAACGAAAAGTACGCTTGTCACCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCtt < 2:1662697/97‑1 (MQ=255) aCAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCttt > 1:2590197/1‑97 (MQ=255) cAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAAGAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCtttt > 1:1974680/1‑97 (MQ=255) aaTTAACGAAAAGTACTCTTGTCATCGAGTGGGAATACTCATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGACtttcct > 2:715198/1‑94 (MQ=37) aaTTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCtttttt < 2:1946490/97‑1 (MQ=255) aaTTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCtttttt > 1:1250498/1‑97 (MQ=255) aTTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTg > 2:1936691/1‑97 (MQ=255) ttAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTgg > 1:231689/1‑97 (MQ=255) tAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGt > 1:775674/1‑97 (MQ=255) aaCGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTg > 2:1028441/1‑97 (MQ=255) cGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCg > 2:220487/1‑97 (MQ=255) cGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACACGGTTTCTAGCCTTTTTTGGTGCg < 1:556318/97‑1 (MQ=255) gAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGa < 2:1139549/97‑1 (MQ=255) gAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACACGGTTTCTAGCCTTTTTTGGTGCGa > 1:1695752/1‑97 (MQ=255) aaaGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGAtt > 2:1799190/1‑97 (MQ=255) aaGTACTCTTGTCATCGAGTGGGAATAGTTATATACAGCAAAAGATAGGCTAGAAGTACCGTGAATACGCGGATTCTAGCCTTATTGGGGGCGAtcg > 2:403602/1‑95 (MQ=255) aGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTgg < 1:2556259/97‑1 (MQ=255) aGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTgg > 1:1027179/1‑97 (MQ=255) aGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTgg > 1:2289853/1‑97 (MQ=255) aGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTgg > 1:838436/1‑97 (MQ=255) aGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTgg > 1:1798944/1‑97 (MQ=255) aGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACACGGTTTCTAGCCTTTTTTGGTGCGATTgg < 1:759286/97‑1 (MQ=255) aGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACACGGTTTCTAGCCTTTTTTGGTGCGATTgg < 1:759383/97‑1 (MQ=255) ctctTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATg > 1:1638092/1‑97 (MQ=255) ctTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTATAGCCTTTTTTGGTGCGATTGGTACggg > 2:1312591/1‑97 (MQ=255) ttGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGc < 2:75186/97‑1 (MQ=255) ttGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGc > 1:234797/1‑97 (MQ=255) gTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCaa < 1:2915922/97‑1 (MQ=255) gTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACACGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCaa > 1:1568824/1‑97 (MQ=255) aTCGTGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAAcat < 2:581706/97‑1 (MQ=255) aTCGAGTGGGAATAATTTTATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAAcat < 1:895603/97‑1 (MQ=255) aTCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAAcat < 1:1853950/97‑1 (MQ=255) aTCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAAcat < 2:2735275/97‑1 (MQ=255) cGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAAcatca < 1:1340301/97‑1 (MQ=255) gTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCAtgt < 1:661152/97‑1 (MQ=255) gTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCAtgt < 2:290230/97‑1 (MQ=255) gTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCAtgt > 1:854577/1‑97 (MQ=255) ggAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGtgat > 1:597323/1‑97 (MQ=255) gAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGtgatg > 2:2731794/1‑97 (MQ=255) aataatTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGtgatga < 1:1215850/97‑1 (MQ=255) aataatTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGtgatga < 1:1215849/97‑1 (MQ=255) ataatTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGaa > 1:1641553/1‑97 (MQ=255) aatTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAat < 2:1789449/97‑1 (MQ=255) aatTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAat < 2:2167139/97‑1 (MQ=255) tatatataGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAatgat > 1:2386716/1‑97 (MQ=255) atatataGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAatgatg > 1:198151/1‑97 (MQ=255) atagaGGAAATGATAGGCTAGAAGTACCGTTATTGCGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAAGGATggg < 2:300595/97‑1 (MQ=37) tataGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGa > 1:886164/1‑97 (MQ=255) tataGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTATTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGa < 2:2457584/97‑1 (MQ=255) taGCAAATGGTAGGCTAGAAGTACCGTTATTACCCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATTAAATGATGGGAGt < 2:1617501/97‑1 (MQ=255) taGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGt < 1:1884138/97‑1 (MQ=255) gCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTta > 1:2891859/1‑97 (MQ=255) cAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTtat < 1:529669/97‑1 (MQ=255) cAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTtat < 1:1514384/97‑1 (MQ=255) aaaTGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTtata < 2:1412796/97‑1 (MQ=255) aaaTGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTtata < 1:307630/97‑1 (MQ=255) tGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTTTTTTTTTTGGTATCGGCAACATCCTGTGATGACACGATGGGAGGTATATCt > 2:739190/1‑97 (MQ=255) gATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTg < 2:1309294/97‑1 (MQ=255) aTAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGt > 1:870405/1‑97 (MQ=255) aTAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGt > 1:1969472/1‑97 (MQ=255) tAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTa > 1:498091/1‑97 (MQ=255) aGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAg > 2:525383/1‑97 (MQ=255) aGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAACGATGGGAGTTATAACTGTAg > 2:29414/1‑97 (MQ=255) ggCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGa > 1:1758419/1‑97 (MQ=255) gCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGaa > 2:2466830/1‑97 (MQ=255) cTAGAAGTACCGTTATTACGCGGAATCTAGCCTTTTTTGGTGCGACTGGTATGGGCAACATCATGTGATGAAATGATGGGAGGTATATCTGTAgcca > 2:1848098/1‑94 (MQ=38) aGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAAtt < 2:1725600/97‑1 (MQ=255) aGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAAtt > 2:211522/1‑97 (MQ=255) gAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTg < 2:1464587/97‑1 (MQ=255) aaGTACCGTTATTACACGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTgg < 2:1052679/97‑1 (MQ=255) aGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGc > 1:2165959/1‑97 (MQ=255) aGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGc > 1:1579908/1‑97 (MQ=255) aGTACCGTTATGACGCGGTGTCTAGCCTTTTGTGGTGCGAGTGGTATGGGCAACATCATGTGCTGAAATGATGGGAGTTGTATCTGTAGAATTTgtc > 2:559198/1‑95 (MQ=37) gTACCGTTATTACACGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCg < 1:1138984/97‑1 (MQ=255) aCCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCGTa < 1:1778558/97‑1 (MQ=255) ccGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCGTAc > 2:1136770/1‑97 (MQ=255) ccGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCAGGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCGTAc > 1:2024646/1‑97 (MQ=255) ttattaCGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCGTACCaa > 2:1365240/1‑97 (MQ=255) ttattaCGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCGTACCaa > 1:903613/1‑97 (MQ=255) ttattaCGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCGTACCaa < 1:1546043/97‑1 (MQ=255) ttaCGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCGTACCAAttt < 1:228285/97‑1 (MQ=255) taCGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCGTACCAATTTc < 1:1939903/97‑1 (MQ=255) taCGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCGTACCAATTTc > 2:1643300/1‑97 (MQ=255) taCGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAAAGATGGGAGTTATATCTGTAGAAATTGGCGTACCAATTTc < 1:1521/97‑1 (MQ=255) cgcgGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCGTACCAATTTCtt < 1:2319083/97‑1 (MQ=255) | AGTTATAAACTGGTACAAATTAACGAAAAGTACTCTTGTCATCGAGTGGGAATAATTATATATAGCAAATGATAGGCTAGAAGTACCGTTATTACGCGGTTTCTAGCCTTTTTTGGTGCGATTGGTATGGGCAACATCATGTGATGAAATGATGGGAGTTATATCTGTAGAAATTGGCGTACCAATTTCTT > BX571857/416390‑416580 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |