| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 629,811 | G→T | 100% | intergenic (+506/‑81) | SAS0548 → / → SAS0549 | lipoate‑protein ligase A protein/mevalonate kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 629,811 | 0 | G | T | 95.5% | 526.3 / 17.4 | 132 | intergenic (+506/‑81) | SAS0548/SAS0549 | lipoate‑protein ligase A protein/mevalonate kinase |
| Reads supporting (aligned to +/- strand): ref base G (6/0); new base T (91/35); total (97/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.05e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 132 total aligned reads displayed.
GTTAAGTCAAATATAAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATGCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGATATTGACATGACAAGAAA > BX571857/629720‑629902 | gTTAAGTCAAATATAAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACt > 2:513619/1‑97 (MQ=255) aaGTCAAATATAAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAg > 1:2905060/1‑97 (MQ=255) aaGTCAAATATAAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATGCAACTTAg > 2:2080610/1‑97 (MQ=255) gTCAAATATAAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGaa < 2:913771/97‑1 (MQ=255) tCAAATATAAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAat > 2:1389179/1‑97 (MQ=255) tCAAATATAAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAat > 1:1358180/1‑97 (MQ=255) tCAAATATAAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAat > 1:1358106/1‑97 (MQ=255) cAAATATAAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAata > 1:2807911/1‑97 (MQ=255) atatAAATTCAAAAGAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGCATCCGTATTCAACTTAGAATctga > 2:173426/1‑97 (MQ=255) tataAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATatgat < 1:144792/97‑1 (MQ=255) tataAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATatgat > 2:2241354/1‑97 (MQ=255) aataAATGCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATatggt < 2:586439/96‑3 (MQ=255) ataAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATatgatg < 2:957300/97‑1 (MQ=255) ataAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATatgatg > 1:373516/1‑97 (MQ=255) ataAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATatgatg < 1:1786079/97‑1 (MQ=255) taAATTCAAAATAAAGCTTATACATAAGATGGATAAAGTGAGATAAAGATTGCAATGAAATTTAACGCGAAAGCATATTCAACTTAGAATATGACGt > 2:2271486/1‑97 (MQ=255) taAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGt > 2:1628415/1‑97 (MQ=255) taAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGt > 1:2402228/1‑97 (MQ=255) taAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGt < 1:2005265/97‑1 (MQ=255) aaTTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCt > 1:2065742/1‑97 (MQ=255) ttCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCttt > 1:2840093/1‑97 (MQ=255) tCATAAAAAAGATTATGCATATTATGAATAATGTGTTATAAAGACTGCAATGAAAAATAACGCGAATGCGTCTTCAAGTAAGAATATCAAGGCtttt > 2:948055/1‑97 (MQ=255) tCAAGATAAAGATTATACATAATCTGAATAATGTGAGATAAAGACTGCCGTGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCtttt < 1:769444/97‑1 (MQ=255) tCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCtttt > 1:2783608/1‑97 (MQ=255) aaaaTAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTAc > 1:2281731/1‑97 (MQ=255) aaaTAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACt < 2:2857749/97‑1 (MQ=255) aaTAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACta > 1:308787/1‑97 (MQ=255) tAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACtaat > 1:2883537/1‑97 (MQ=255) tAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATGCAACTTAGAATATGATGTCTTTTACtaat > 1:1094464/1‑97 (MQ=255) aaaGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACtaata > 1:738875/1‑97 (MQ=255) aaaGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACtaata < 1:1707470/97‑1 (MQ=255) aaGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACtaataa > 1:2671026/1‑97 (MQ=255) aaGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACtaataa > 2:1367004/1‑97 (MQ=255) gATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTaataaat > 1:975099/1‑97 (MQ=255) aTTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTaataaata > 2:407141/1‑97 (MQ=255) ttATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAataaataa < 1:2677391/97‑1 (MQ=255) ttATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATGCAACTTAGAATATGATGTCTTTTACTAataaataa > 1:1357788/1‑97 (MQ=255) aCATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATaaataaaaat > 2:1323024/1‑97 (MQ=255) aCATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATaaataaaaat > 2:1793401/1‑97 (MQ=255) aCATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATaaataaaaat > 2:2599850/1‑97 (MQ=255) cATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATaaataaaaata > 1:76466/1‑97 (MQ=255) ataataTGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATaaataaaaataa > 1:1112393/1‑97 (MQ=255) ataataTGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATaaataaaaataa < 1:2363844/97‑1 (MQ=255) taataTGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAaataat > 1:575011/1‑97 (MQ=255) taataTGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAaataat < 2:2694275/97‑1 (MQ=255) taataTGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAaataat > 1:1966863/1‑97 (MQ=255) aataTGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATg < 2:1504313/97‑1 (MQ=255) aataTGAATAAAGTGAGATACAGACTGCACTGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATg > 2:1113343/1‑97 (MQ=255) atatGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGa > 1:1749922/1‑97 (MQ=255) atatGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGa > 1:731494/1‑97 (MQ=255) atatGAATAATGGGAGATAAAGACTGCAATGGAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAAGAAAAATAATGa < 2:681311/97‑1 (MQ=255) atGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAAt > 1:1808502/1‑97 (MQ=255) tGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATc < 1:2390668/97‑1 (MQ=255) tGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTGACTAATAAATAAAAATAATGAATc > 2:1904669/1‑97 (MQ=255) tGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATGCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATc > 1:2983047/1‑97 (MQ=255) gAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCa < 2:2907453/97‑1 (MQ=255) gAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCa > 1:2536402/1‑97 (MQ=255) ataatGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAg > 2:2553395/1‑97 (MQ=255) ataatGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAg > 2:2450114/1‑97 (MQ=255) ataatGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAg > 1:2879930/1‑97 (MQ=255) ataatGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTACTCAACTTAGAATATGATGTCTTTTACTAATAAATACAAATAATGAATCAAg > 2:2343118/1‑97 (MQ=255) taatGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGt > 2:2118489/1‑97 (MQ=255) taatGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGt > 2:2044742/1‑97 (MQ=255) taatGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAAACAAGt > 1:811288/1‑97 (MQ=255) aatGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGta > 1:946390/1‑97 (MQ=255) aatGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGta > 1:2289315/1‑97 (MQ=255) atGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGtat < 2:314437/97‑1 (MQ=255) gtgAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAg > 2:1949978/1‑97 (MQ=255) gtgAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAg < 1:2005035/97‑1 (MQ=255) gtgAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAg > 2:2599268/1‑97 (MQ=255) tgAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAgg < 1:1440938/97‑1 (MQ=255) gagaTAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGa > 2:813126/1‑97 (MQ=255) gagaTAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGa > 2:2992241/1‑97 (MQ=255) agaTAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGAt > 1:2563926/1‑97 (MQ=255) agaTAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGAt > 2:2554555/1‑97 (MQ=255) aTAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATaa < 1:1641912/97‑1 (MQ=255) aTAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATaa > 2:1680582/1‑97 (MQ=255) tAAAGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATaaa > 1:1316610/1‑97 (MQ=255) aaaGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAat < 2:1942575/97‑1 (MQ=255) aaaGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAat > 2:114847/1‑97 (MQ=255) aaGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAata > 1:2029431/1‑97 (MQ=255) aGACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAatat > 1:54330/1‑97 (MQ=255) gACTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAAtata > 1:616790/1‑97 (MQ=255) aCTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATaa > 2:716585/1‑97 (MQ=255) cTGCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATaaa < 2:2874830/97‑1 (MQ=255) gCAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAg > 1:2337231/1‑97 (MQ=255) cAATGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAgg > 1:675613/1‑97 (MQ=255) aaTGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGt < 2:1065777/97‑1 (MQ=255) tGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGa > 1:67677/1‑97 (MQ=255) tGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGa < 1:2217629/97‑1 (MQ=255) tGAAATTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGa < 2:55921/97‑1 (MQ=255) gAAATTTATCGCGAATGCTTATTCAACTTCGAATATGACATCTTTTACTAATACATGAAAATAATGAATTAAGTATAGGATAAATAAAGAAGGTGat > 2:1471315/1‑97 (MQ=255) aaaTTTAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGata < 1:2509481/97‑1 (MQ=255) ttAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGATATtga > 1:2653786/1‑97 (MQ=255) tAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGATATtgac > 1:114765/1‑97 (MQ=255) tAACGCGAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGATATtgac < 2:2248675/97‑1 (MQ=255) cgcgAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGATATtgacatg > 1:1369072/1‑97 (MQ=255) gcgAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGATATtgacatga > 1:1416956/1‑97 (MQ=255) gAATGCGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGATATtgacatgaca > 1:470885/1‑97 (MQ=255) cGTATTCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGATATTGACATGACAAGaaa > 1:2120019/1‑97 (MQ=255) | GTTAAGTCAAATATAAATTCAAAATAAAGATTATACATAATATGAATAATGTGAGATAAAGACTGCAATGAAATTTAACGCGAATGCGTATGCAACTTAGAATATGATGTCTTTTACTAATAAATAAAAATAATGAATCAAGTATAGGATAAATATAAAAGGTGATATTGACATGACAAGAAA > BX571857/629720‑629902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |