| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571858 | 20,628:1 | +G | 100% | coding (288/306 nt) | pSAS24 → | putative exported protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571858 | 20,628 | 1 | . | G | 100.0% | 1840.5 / ‑6.5 | 410 | K96K (AAA→AAG) | pSAS24 | putative exported protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); major base G (211/197); minor base T (1/0); total (213/197) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 436 total aligned reads displayed.
TTATAAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAA‑ATATTCCTAGCTTTTTAAAATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G > BX571858/20532‑20652 | ttATAAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑aaaa < 2:485436/97‑1 (MQ=255) aaaTTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑aaaagata < 2:957519/97‑5 (MQ=255) ttGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTc > 1:2059903/1‑97 (MQ=255) ggcttttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCt > 1:952322/4‑97 (MQ=255) ggATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCt < 2:2541560/97‑1 (MQ=255) ggATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCt < 2:1210056/97‑1 (MQ=255) ggATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCt > 1:1702343/1‑97 (MQ=255) aTTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAg < 1:444588/97‑1 (MQ=255) tttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCt < 1:2622416/97‑1 (MQ=255) ttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCtt < 2:2800474/97‑1 (MQ=255) ttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCtt < 1:1956715/97‑1 (MQ=255) ttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCtt > 1:1050855/1‑97 (MQ=255) ttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATATACGTTCGATAGAATACATAACAAAAA‑ATATTCCTAGCtt > 1:578942/1‑97 (MQ=255) tAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCttttt > 1:2129477/1‑97 (MQ=255) ggTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTaa > 1:2596861/1‑97 (MQ=255) ggTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTaa < 1:2631178/97‑1 (MQ=255) tATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAAt > 1:1567070/1‑97 (MQ=255) aTGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATg > 1:1080507/1‑97 (MQ=255) aTGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATg > 2:706966/1‑97 (MQ=255) tGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGa > 1:1411488/1‑97 (MQ=255) gATCCTACAAAAGAATATGTGAAAGTAAATCATACAGGGAAATATGTGCGTTCGATAGAACACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAg < 2:2664028‑M2/97‑2 (MQ=255) aTCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAgg < 2:1713948‑M2/97‑3 (MQ=255) tCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggt > 2:3501319‑M2/1‑94 (MQ=255) ccTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtg < 1:2950294‑M2/97‑5 (MQ=255) cTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtga > 1:278160‑M2/1‑92 (MQ=255) aCAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgacc > 1:878106‑M2/1‑90 (MQ=255) aCAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgacc < 2:2739220‑M2/97‑8 (MQ=255) aCAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgacc > 1:250751‑M2/1‑90 (MQ=255) aCAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgacc > 2:563848‑M2/1‑90 (MQ=255) cAAAAGGATATGTGAAAGTAAGTCGTAGAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AGAATATATTCCTAGCTTTTTAAAATGAggtgaccg > 2:1426172‑M2/1‑89 (MQ=255) cAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccg < 2:1645140‑M2/97‑9 (MQ=255) aaaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccga < 1:684766‑M2/97‑10 (MQ=255) aaaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccga > 2:1258024‑M2/1‑88 (MQ=255) aaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgat > 2:2713171‑M2/1‑87 (MQ=255) aaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgata < 1:3259543‑M2/97‑12 (MQ=255) aGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatag < 1:3432390‑M2/97‑13 (MQ=255) aGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatag < 1:1807434‑M2/97‑13 (MQ=255) gAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagt > 1:1733432‑M2/1‑84 (MQ=255) gAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagt > 1:903367‑M2/1‑84 (MQ=255) aaTATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtg < 2:2165644‑M2/97‑15 (MQ=255) aaTATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtg < 2:1766143‑M2/97‑15 (MQ=255) tatGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgat < 1:1366707‑M2/97‑17 (MQ=255) atGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgata > 2:2417960‑M2/1‑80 (MQ=255) tgtgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataa > 1:2395174‑M2/1‑79 (MQ=255) gAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaac < 1:1894976‑M2/97‑22 (MQ=255) aGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttg > 2:2348155‑M2/1‑73 (MQ=255) aGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttg < 2:878139‑M2/97‑25 (MQ=255) gTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaagttga < 2:2637638‑M2/97‑26 (MQ=255) gTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttga < 1:2845503‑M2/97‑26 (MQ=255) aaaTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaa < 1:755887‑M2/97‑28 (MQ=255) aaTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaa < 1:274617‑M2/97‑29 (MQ=255) tCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatg < 2:399529‑M2/97‑31 (MQ=255) tCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatg < 1:1506914‑M2/97‑31 (MQ=255) tCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatg < 2:2306999‑M2/97‑31 (MQ=255) aTAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtt > 2:184430‑M2/1‑65 (MQ=255) aTAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtt < 1:936342‑M2/97‑33 (MQ=255) aaaGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttt > 2:3018450‑M2/1‑63 (MQ=255) aaGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgttttt > 2:1408896‑M2/1‑62 (MQ=255) gggAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgt > 1:2347949‑M2/1‑60 (MQ=255) gggAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgt < 1:3363494‑M2/97‑38 (MQ=255) gggAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgt > 1:3464197‑M2/1‑60 (MQ=255) ggAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgta < 1:3241727‑M2/97‑39 (MQ=255) ggAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgta > 1:2035782‑M2/1‑59 (MQ=255) ggAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgta > 1:804300‑M2/1‑59 (MQ=255) ggAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgta < 2:3336362‑M2/97‑39 (MQ=255) ggAAATATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgta > 1:1116494‑M2/1‑59 (MQ=255) aaaTATGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaa > 1:1629381‑M2/1‑57 (MQ=255) tatGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaa < 1:302109‑M2/97‑44 (MQ=255) atGTGCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaa < 2:1497539‑M2/97‑45 (MQ=255) tgCTTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggt > 2:608797‑M2/1‑50 (MQ=255) gCGTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggta < 2:2941692‑M2/97‑49 (MQ=255) cGTTCGATAGCATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgacagtgataaaacttgaaaatgtctttgtaaaaaaaggtaa < 2:1019467‑M2/97‑50 (MQ=255) gTTCGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaat > 2:3453005‑M2/1‑47 (MQ=255) cGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaa < 2:1990566‑M2/97‑54 (MQ=255) cGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaa > 2:3229189‑M2/1‑44 (MQ=255) cGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaa < 1:3159000‑M2/97‑54 (MQ=255) cGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaa > 1:2896754‑M2/1‑44 (MQ=255) cGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaa < 1:269160‑M2/97‑54 (MQ=255) cGATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaacaaa < 1:1303585‑M2/97‑54 (MQ=255) gATAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaa > 1:1880082‑M2/1‑43 (MQ=255) aTAGAAGACATGAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaa > 2:815832‑M2/1‑42 (MQ=255) tAGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaac > 1:2874413‑M2/1‑41 (MQ=255) aGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaaca < 2:1926764‑M2/97‑58 (MQ=255) aGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaaca > 1:1205160‑M2/1‑40 (MQ=255) aGAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaaca < 2:1747595‑M2/97‑58 (MQ=255) gAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacat > 2:746317‑M2/1‑39 (MQ=255) gAATACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacat < 2:3056338‑M2/97‑59 (MQ=255) gAATACATTAC‑AAAAGATATTCCTAGCTGTTTAAAATGAggtgaccgatagtgataaaacctgaaaatgtctttttaaaaaaatgtcataaaaacat < 2:684727‑M2/97‑59 (MQ=255) aaTACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatt < 2:2858429‑M2/97‑60 (MQ=255) aTACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattt < 1:3096764‑M2/97‑61 (MQ=255) aTACATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattt < 1:418708‑M2/97‑61 (MQ=255) aCATTAC‑TAAAGATATTCCTATCTTTTTAAAATGAggtgtccgatagttataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttta > 2:665225‑M2/1‑35 (MQ=255) aCATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttta > 1:2017357‑M2/1‑35 (MQ=255) aCATTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttta > 2:1116306‑M2/1‑35 (MQ=255) aTTAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttaga > 2:2102103‑M2/1‑33 (MQ=255) tAC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacg > 1:1251860‑M2/1‑31 (MQ=255) aC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacgg < 2:1871351‑M2/97‑68 (MQ=255) aC‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacgg < 2:982553‑M2/97‑68 (MQ=255) c‑AAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacgga > 2:2484203‑M2/1‑29 (MQ=255) aaaag‑atATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggat > 2:1300069‑M2/2‑28 (MQ=255) | TTATAAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTAC‑AAAA‑ATATTCCTAGCTTTTTAAAATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G > BX571858/20532‑20652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |