| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 1,937,435 | A→G | 9.2% | noncoding (62/90 nt) | tRNA Ser anticodon TGA_ Cove score 61.04 ← | tRNA‑Ser |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 1,937,435 | 0 | A | G | 9.2% | 475.2 / 9.8 | 147 | noncoding (62/90 nt) | tRNA Ser anticodon TGA_ Cove score 61.04 | tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base A (79/51); new base G (4/12); total (84/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.85e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 154 total aligned reads displayed.
TCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCTGCG > BX571857/1937339‑1937531 | tCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGa < 2:540377/97‑1 (MQ=255)tCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGa > 1:1596144/1‑97 (MQ=255)tCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGa > 1:580493/1‑97 (MQ=255)tCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGCGTTAACCGCTACACTACGCGACCACGAGTGAACCGGAGGAGGGGGGATGCGAACCCCCGCGa > 2:3485065/1‑97 (MQ=17) atcccGCGATCTCCTGCGTGCCAGGCAGGCGTGTTAACCGCTACCCCACCACGCCATTAGTACGACGGAGGAAGAGGGATTCGAACCCCCGCGAGcc < 2:2466345/95‑1 (MQ=21) accccGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGcc < 1:1120226/95‑1 (MQ=255) aaCCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTACCCGCTACACTACGAGACCATTAGTGAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGcc < 1:3368514/97‑1 (MQ=255) aCCGGCGGTCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACAATTAGTAAAGCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCg < 2:1882740/97‑1 (MQ=25) aCCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCg > 2:1713215/1‑97 (MQ=255) cccGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGt > 1:2433805/1‑97 (MQ=255) ccGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTATGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGtt > 2:3196298/1‑97 (MQ=255) ccGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAACACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCgcc > 2:2784184/1‑95 (MQ=255) ccGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGGGcc < 2:1299560/94‑1 (MQ=255) ccGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGGGcc > 1:1299561/1‑94 (MQ=255) ccGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGtt > 1:3409230/1‑97 (MQ=255) gcgATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTaa > 1:1376775/1‑97 (MQ=255) ccgATCACCTGCGCGACAAGCAACCGAACTACCCCCTACCCCACGAAACCATTAGAAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTaa < 2:3455745/96‑1 (MQ=12) tctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACCACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGccc > 1:1528397/1‑97 (MQ=255) ctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGGGGAAGAGGGATTCGAACCCCCGCGGGCCGGTAAGcccc > 1:3240613/1‑97 (MQ=255) ctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGCGCCGTTAACcccc > 2:229274/1‑97 (MQ=255) ctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGcccc > 2:3443195/1‑97 (MQ=255) tcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCt < 1:2351089/97‑1 (MQ=255) cGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCgg > 2:3367628/1‑97 (MQ=255) gTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGt < 2:1104159/97‑1 (MQ=255) gTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCCGACggc > 2:43560/1‑96 (MQ=255) aCAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGtttt > 1:279117/1‑97 (MQ=255) ggcaggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGACCCGCCCAGCCCCGGTCGGtttttac > 2:1894760/1‑94 (MQ=25) gcaggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAg > 1:842086/1‑97 (MQ=255) caggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGa > 1:2907859/1‑97 (MQ=255) cGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGa > 2:2010708/1‑97 (MQ=255) gtTCACCGCTACACTACGAGGCCATGAGTAAAACGGAGGAAGAGGGATTCGATCCCCCGCGGGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATcc < 1:1388026/97‑1 (MQ=18) ttAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATccc > 1:1936251/1‑97 (MQ=255) tgaCCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCt < 2:132610/95‑1 (MQ=255) tAACCGCTACACTACGAGACCATCAGTAAAACGGAGGAAGACGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATcccg > 2:445385/1‑96 (MQ=255) aCCGCTACAGTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTc < 1:845566/97‑1 (MQ=255) cGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAg < 1:3276570/97‑1 (MQ=255) tACACGACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCg < 1:2248085/97‑1 (MQ=255) acacTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCgg < 1:2597912/97‑1 (MQ=255) acacTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCgg > 2:2887426/1‑97 (MQ=255) acacTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCgg > 2:755412/1‑97 (MQ=255) gagtACGAGACCATTAGCAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGa < 1:1255971/94‑1 (MQ=255) cacTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGa < 1:3395215/97‑1 (MQ=255) cTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACt > 2:2326163/1‑97 (MQ=255) cTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACt > 1:1171506/1‑97 (MQ=255) tACGAGCCCATTAGTAAAACGGCGGCAGCGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGGTGTCAAGCCCGATCCCTTCAGCCggcccc > 2:2066149/1‑93 (MQ=17) tACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACtt > 1:2235439/1‑97 (MQ=255) aCGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTg > 1:733752/1‑97 (MQ=255) cGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTgg > 1:3139513/1‑97 (MQ=255) cGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTgg > 2:2567611/1‑97 (MQ=255) gagaCCATTAGTAAAGCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTggg < 2:2091781/97‑1 (MQ=255) agaCCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGt < 2:3003089/97‑1 (MQ=255) agaCCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGt < 2:3003088/97‑1 (MQ=255) gaCCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTa > 1:456156/1‑97 (MQ=255) aaCCATTAGTAAAGCGGAGGAAGAGGGATTCGAACCCCCGCGGGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTa < 1:286873/96‑1 (MQ=255) aCCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTACGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGCCTTGGGTAt > 2:1208362/1‑97 (MQ=255) cATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATtc > 1:1542488/1‑97 (MQ=255) cATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTCTCAAGACCGATCCCTTCAGCCGGACTTGGGTATtc > 1:1589374/1‑97 (MQ=255) aTTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATtcc > 1:2203947/1‑97 (MQ=255) aTTAGAAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATtcc < 1:1906901/97‑1 (MQ=255) tAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATtcctc > 1:1177271/1‑97 (MQ=39) aGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGGCGGTTTTCAAGACCGGCCCCTCCAGCCGGACTTGGGGCTtcctcc > 2:824873/1‑97 (MQ=11) aGTAAAACGGAGGAAGAGGGATTCGAACCCCCCCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCCGCCGGGCTGGGGTCTgcctcc > 2:903926/1‑97 (MQ=11) gTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCa > 1:1021166/1‑97 (MQ=38) tAAAGCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaa < 2:2516574/97‑1 (MQ=18) ggcgcGGAGGGAGAGGGATTCGAGCCCCCGCGGGCCGTTAAGCCCCTGTGGGTTTTGAAGACCGGTCGCTTCAGCCGGACTTGGGTATTCCTCCaaa < 2:985765/93‑1 (MQ=11) aaagCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaaa < 1:3108456/97‑1 (MQ=18) aaaCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaaaa > 2:1001688/1‑97 (MQ=37) aaaCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaaaa > 1:895345/1‑97 (MQ=38) gaCGGAGGAAGAGGGGTGCGACCCCCGGCGGGCCGTTAAGCCCCTGGCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAAt < 2:154826/96‑1 (MQ=11) aaCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAAt < 1:3238703/97‑1 (MQ=38) cGGAGGACGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACCTGGGTATTCCTCCACAATta > 2:810924/1‑97 (MQ=255) cGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATta < 2:2105426/97‑1 (MQ=37) gaggaAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATtata > 2:2007135/1‑97 (MQ=40) gaggaAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGGCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATtata < 2:915049/97‑1 (MQ=255) aggaAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGGTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTatat > 1:563861/1‑97 (MQ=255) ggaAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATGATATg > 2:2690793/1‑97 (MQ=255) aaGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGa < 2:2825912/97‑1 (MQ=255) aaGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGa > 2:560838/1‑97 (MQ=255) agagGGATTCGAACCCCCGCGGGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGAc < 1:704830/97‑1 (MQ=255) agagGGATTCGAACCCCCGCGAGCCGTTCAGCCCCCGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTAGTCCTCCAAAATTATATGGAc < 2:2580855/97‑1 (MQ=255) agagGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGAc > 1:1955280/1‑97 (MQ=255) gagGGATTCGAACCCCCGCGGCCCGTTAAGGCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGAcc < 2:2335470/97‑1 (MQ=11) gagGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGAcc > 2:1015164/1‑97 (MQ=255) agGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCt > 1:73770/1‑97 (MQ=255) agGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCt > 1:2425219/1‑97 (MQ=255) ggATGCGACCCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTg < 2:2224858/97‑1 (MQ=255) aTTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGcc > 2:278075/1‑96 (MQ=255) ttCGAACCCCCGCGGCCCGTTAAGGCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAg < 2:3350589/97‑1 (MQ=14) cGATCCCCCGCGAGCCGTTACGCCGCTGTCGGGTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGa < 2:3080646/97‑1 (MQ=18) cccccGCGGCCCGTTAAGGCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATAGGGAACTTGCAGGACTCg > 2:3188881/1‑97 (MQ=11) cccccGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCg < 1:1990516/97‑1 (MQ=255) ccccGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGa < 1:1764940/97‑1 (MQ=255) cccGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGaa > 1:745031/1‑97 (MQ=255) cccGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGaa > 1:1703252/1‑97 (MQ=255) ccGCGGGCCGTTAAGGCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAAc < 2:658977/97‑1 (MQ=255) cgcgAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAAcc < 1:3479421/97‑1 (MQ=255) gcgAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCt > 1:2779316/1‑97 (MQ=255) gcgAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCt > 1:2334469/1‑97 (MQ=255) aGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCTGCg < 1:383257/97‑1 (MQ=255) aGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCTGCg < 2:3059314/97‑1 (MQ=255) | TCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCTGCG > BX571857/1937339‑1937531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |