| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 2,553,454 | C→A | 28.4% | P7P (CCG→CCT) | SAS2383 ← | putative cell wall‑anchored protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 2,553,454 | 0 | C | A | 28.4% | 438.2 / 160.6 | 171 | P7P (CCG→CCT) | SAS2383 | putative cell wall‑anchored protein |
| Reads supporting (aligned to +/- strand): ref base C (34/88); new base A (19/30); total (53/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 172 total aligned reads displayed.
TAGTGAGCCAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATACAATAGGA > BX571857/2553358‑2553548 | tAGTGAGCCAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTAcc > 1:1467010/1‑97 (MQ=255) aGTGAGCCAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCg > 1:976731/1‑97 (MQ=255) tGAGCCAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGt < 2:1901544/97‑1 (MQ=255) gAGCCAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTc < 2:2095911/97‑1 (MQ=255) gAGCCAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTc < 1:2009261/97‑1 (MQ=255) gAGCCAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTc < 1:2009051/97‑1 (MQ=255) gAGCCAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTc < 2:2600927/97‑1 (MQ=255) gCCAATTAAAATAGGTGCTGTTCCATCTGTAAATTTTCTTATTTAATATTTATTCGATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCt < 1:81159/97‑1 (MQ=255) gCCAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCt < 2:1383931/97‑1 (MQ=255) gCCAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCt < 1:1151538/97‑1 (MQ=255) gCCAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCt < 1:1596099/97‑1 (MQ=255) cAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCttt < 1:3097679/97‑1 (MQ=255) cAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCttt > 1:3265110/1‑97 (MQ=255) cAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCttt < 2:2761633/97‑1 (MQ=255) cAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCttt < 2:3136612/97‑1 (MQ=255) ttAAAATAGATGCTGTTCCAACTGTACATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCtt < 2:3049599/97‑1 (MQ=255) ttAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCtt < 2:2050844/97‑1 (MQ=255) aaaTAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTAtc < 2:2229438/97‑1 (MQ=255) aTAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTAtctc > 2:2373456/1‑97 (MQ=255) tAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTAtctct < 2:496690/97‑1 (MQ=255) aGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTAtctctc < 1:1103373/97‑1 (MQ=255) gATGCTGTTCCAACTGTAATTTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCa < 2:318428/97‑1 (MQ=255) gATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCa < 2:3275008/97‑1 (MQ=255) gATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCa < 2:3275977/97‑1 (MQ=255) tGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCAtt > 1:1370907/1‑97 (MQ=255) tGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCAtt > 2:761748/1‑97 (MQ=255) gCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCGttt < 2:3170578/97‑1 (MQ=255) gCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCAttt > 2:1267501/1‑97 (MQ=255) tGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGc > 1:1875279/1‑97 (MQ=255) gTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCa > 1:79014/1‑97 (MQ=255) ttCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCAt < 1:2161877/97‑1 (MQ=255) aaCTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGGTAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTc < 2:927261/97‑1 (MQ=255) aCTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTcc < 1:3222429/97‑1 (MQ=255) aCTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTcc > 1:680039/1‑97 (MQ=255) cTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCt < 2:116776/97‑1 (MQ=255) tGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCtt < 1:2136317/97‑1 (MQ=255) gTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCttt < 1:2493276/97‑1 (MQ=255) aaaTTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCttttt < 1:1928578/97‑1 (MQ=255) aaTTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTc < 2:760949/97‑1 (MQ=255) aaTTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTc < 1:2245592/97‑1 (MQ=255) aaTTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTc < 1:15500/97‑1 (MQ=255) ttCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCata < 2:497720/97‑1 (MQ=255) ttCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCata < 2:3455511/97‑1 (MQ=255) tCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCatat < 2:2929195/97‑1 (MQ=255) cTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATAtt < 2:1745055/97‑1 (MQ=255) cTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATAtt < 1:1367472/97‑1 (MQ=255) cTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATAtt < 1:2166768/97‑1 (MQ=255) ttATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATAttt < 2:1151812/97‑1 (MQ=255) ttATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATAttt < 1:2806905/97‑1 (MQ=255) aTTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTc > 1:1902336/1‑97 (MQ=255) ttGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTcc < 1:600888/97‑1 (MQ=255) atatTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACtt < 1:1291119/97‑1 (MQ=255) atatTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACtt < 2:3253473/97‑1 (MQ=255) tatttattCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACttt < 2:1654302/97‑1 (MQ=255) tatttattCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACttt < 2:381751/97‑1 (MQ=255) tatttattCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACttt < 1:3039998/97‑1 (MQ=255) atttattCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTtta > 2:2513436/1‑97 (MQ=255) tattCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTttactt > 1:1069982/1‑97 (MQ=255) attCAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTttactta < 2:412338/97‑1 (MQ=255) ttCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTttacttac < 1:3156448/97‑1 (MQ=255) tCAATTTATTTGATATAAAATCTGCTCTTTTTTTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTGCCACTTTACTTACa < 2:1132899/97‑1 (MQ=255) cAATTTATTTGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTTCATATTTTCCACTTTACTTACAg > 2:2263846/1‑97 (MQ=255) aaTTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGt < 2:1467824/97‑1 (MQ=255) atttatttGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTg < 2:3313045/97‑1 (MQ=255) atttatttGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTg > 2:767169/1‑97 (MQ=255) tatttGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAAt > 1:714761/1‑97 (MQ=255) atttGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAAtt > 1:719065/1‑97 (MQ=255) atttGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAAtt < 1:2686969/97‑1 (MQ=255) tGATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTAc < 2:2642219/97‑1 (MQ=255) gATAGAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACa < 2:2190258/97‑1 (MQ=255) tAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATg < 1:2153466/97‑1 (MQ=255) aGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGt > 1:862286/1‑97 (MQ=255) aGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGt < 1:1044931/97‑1 (MQ=255) gAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTa > 2:550204/1‑97 (MQ=255) gAAAATCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTa > 2:434954/1‑97 (MQ=255) aaaaTCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTaa < 1:932728/97‑1 (MQ=255) aaaTCTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAAt > 1:2773081/1‑97 (MQ=255) aaTCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTCCTTACAGTGAATTTACATGTAAtt > 2:2920296/1‑97 (MQ=255) aaTCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAAtt < 1:1618487/97‑1 (MQ=255) aTCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAAttt < 1:2054711/97‑1 (MQ=255) aTCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAAttt < 1:3362892/97‑1 (MQ=255) ctcctctTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTa < 2:2827199/94‑1 (MQ=255) cTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTa > 1:2990343/1‑97 (MQ=255) cTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTTTTTTTTTTTCACTTTACTTACAGTGTATTTACATGTAAttttt > 2:2145538/1‑96 (MQ=255) cTACTCTTTTATTTACAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTa < 1:663753/97‑1 (MQ=255) tACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTAc > 2:2688192/1‑97 (MQ=255) tctTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACaaa < 1:2815814/97‑1 (MQ=255) tctTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACaaa < 2:2487488/97‑1 (MQ=255) tctTTTATTTACAGGTCCTTTCTGATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACaaa < 1:988943/97‑1 (MQ=255) tttatttaCCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATAc < 1:1767035/97‑1 (MQ=255) tttatttaCCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATAc < 1:2292711/97‑1 (MQ=255) ttactttCCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATACa < 1:1056935/97‑1 (MQ=255) tatttaCCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATACaa < 2:1620217/97‑1 (MQ=255) tatttaCCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATACaa > 1:2404375/1‑97 (MQ=255) atttaCCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATACAAt > 1:2512367/1‑97 (MQ=255) ttaCCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATACAATAg > 2:1828690/1‑97 (MQ=255) taCCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATACAATAgg > 1:2350422/1‑97 (MQ=255) taCAGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATACAATAgg < 2:601165/97‑1 (MQ=255) aCCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATACAATAGGa < 2:1153946/97‑1 (MQ=255) aCCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATACAATAGGa < 1:1014397/97‑1 (MQ=255) | TAGTGAGCCAATTAAAATAGATGCTGTTCCAACTGTAAATTTTCTTATTGAATATTTATTCAATTTATTTGATAGAAAATCTACTCTTTTATTTACCGGTCCTTTCTTATCTCTCATTTGCATACTCCTTTTTCCATATTTTCCACTTTACTTACAGTGAATTTACATGTAATTTTACAAATACAATAGGA > BX571857/2553358‑2553548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |