| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 1,937,435 | A→G | 5.5% | noncoding (62/90 nt) | tRNA Ser anticodon TGA_ Cove score 61.04 ← | tRNA‑Ser |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 1,937,435 | 0 | A | G | 5.5% | 564.8 / 9.2 | 158 | noncoding (62/90 nt) | tRNA Ser anticodon TGA_ Cove score 61.04 | tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base A (90/55); new base G (2/8); total (94/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.57e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 159 total aligned reads displayed.
GAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCTGCG > BX571857/1937341‑1937531 | gAACCCGCGATCTCCTGCGTGCCAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGACGAGGGATTCGAACCCCCGCCAGc > 2:340698/1‑97 (MQ=255)gAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGCCCATTAGTAAAACGGCGGAAGCGGAATTCGAACCCCCGCGAGc > 1:1748322/1‑97 (MQ=21)gAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGc > 2:231223/1‑97 (MQ=255)gAACCCGCGATCGCCTGCGGGACAGGCAGGCGTGGTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGc < 2:1179468/97‑1 (MQ=255) aaCCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGcc < 1:180829/97‑1 (MQ=255) cccGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGt > 1:467066/1‑97 (MQ=255) ccGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGtt > 2:807870/1‑97 (MQ=255) cgATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAg > 1:2161439/1‑97 (MQ=255) gATCTCCTGCGTGCCAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGAGTCGAACCCCCGCGAGCCGTTAAGc > 2:1860045/1‑97 (MQ=255) ctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGcccc > 1:989394/1‑97 (MQ=255) ctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGcccc < 2:482728/97‑1 (MQ=255) ctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGcccc > 1:1352337/1‑97 (MQ=255) ctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGCGAAGcccc > 2:2040912/1‑97 (MQ=255) tcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGCGCCGTTAAGCCCCt > 2:536509/1‑97 (MQ=255) tcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCt > 2:2224172/1‑97 (MQ=255) tcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCt < 1:807870/97‑1 (MQ=255) cccggCGTGACGGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCt < 2:307531/93‑1 (MQ=255) ccTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTg < 2:94654/97‑1 (MQ=255) ccTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTg < 1:743658/97‑1 (MQ=255) tGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTc > 2:379507/1‑97 (MQ=255) tGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTc < 1:986269/97‑1 (MQ=255) gCGTGACAGGCAGGCGTGTTAACCGCTCCGCTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCg < 2:2202939/97‑1 (MQ=255) gCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCg < 1:413510/97‑1 (MQ=255) cGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCgg > 2:1201840/1‑97 (MQ=255) aCAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGtttt > 2:2266159/1‑97 (MQ=255) aggcaggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCa > 1:1397416/1‑97 (MQ=255) gcaggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAg < 1:1608433/97‑1 (MQ=255) gcaggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAg < 1:1591061/97‑1 (MQ=255) gcaggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCCGTCGGTTTTCAAg > 1:1814644/1‑97 (MQ=255) caggcGTGTTAACCGCTACACTACGAGACCCTTAGTAAAACGGAGGAAGAGGGACTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGa > 2:104279/1‑97 (MQ=255) caggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGa > 2:1378363/1‑97 (MQ=255) caggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTCCTCAAGa > 2:6351/1‑97 (MQ=255) caggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGACTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGa > 1:7170/1‑97 (MQ=255) ggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGAcc > 1:1087076/1‑97 (MQ=255) ggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGAcc < 1:1825642/97‑1 (MQ=255) cGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGa > 1:2006167/1‑97 (MQ=255) gtTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATcc > 1:1845533/1‑97 (MQ=255) ttAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATccc > 2:55445/1‑97 (MQ=255) ttAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTATCAAGACCGATccc > 1:1393721/1‑97 (MQ=255) ttAACCGCTACACTACGAGACCACTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATccc < 1:1646873/97‑1 (MQ=255) tAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCt < 1:2055648/97‑1 (MQ=255) aaCCGCTACCCTGATAGACCATAAGTAAAGCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCtt < 1:71766/97‑1 (MQ=14) aaCCGCTACACTGCGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCtt < 2:865275/97‑1 (MQ=255) cGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAg > 2:368566/1‑97 (MQ=255) cGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAg > 1:818154/1‑97 (MQ=255) cGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAg > 1:818157/1‑97 (MQ=255) gCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGc > 2:145433/1‑97 (MQ=255) gCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGc > 1:829086/1‑97 (MQ=255) acacTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCgg > 2:1909728/1‑97 (MQ=255) cTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACt > 1:227048/1‑97 (MQ=255) cTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACt > 1:233638/1‑97 (MQ=255) tACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACtt > 2:989096/1‑97 (MQ=255) aCGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTg < 2:1107002/97‑1 (MQ=255) gaCCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTa < 1:2068967/97‑1 (MQ=255) gaCCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTa < 1:2127902/97‑1 (MQ=255) ccATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTAtt > 1:2243196/1‑97 (MQ=255) cATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGCCTTGGGTATtc > 2:1341034/1‑97 (MQ=255) cATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATtc > 1:1287889/1‑97 (MQ=255) cATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATtc < 1:2148376/97‑1 (MQ=255) aGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATtcctcc > 2:2113944/1‑97 (MQ=38) aGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATtcctcc > 2:1591898/1‑97 (MQ=38) aGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGGTTTCAAGACCGATCCCTTCAGCCGGACTTGGGCATccctcc > 2:1019656/1‑97 (MQ=255) aaaaCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaaa > 2:1943156/1‑97 (MQ=38) aaaCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaaaa > 1:1196322/1‑97 (MQ=37) gcGGAGGAAGAGGGATTCGAACCCCCGCGGCCCGTTAAGCCCCTGTCGGGTTTCAGGACCGATCCCTCCAGCCGCACTTGGGTATTCCTCCAAAAtt > 2:209436/2‑97 (MQ=1) gcGGAGGAAGAGGGATTCGAACCCACGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAAtt > 1:801022/2‑97 (MQ=255) cGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATta > 1:796232/1‑97 (MQ=38) ggaggaAGAGGGATTCGAACCCCCGCGGGCCGTTAAGGCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATtat < 2:1521713/97‑1 (MQ=255) gggaAGGGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTatat < 1:1110377/96‑1 (MQ=255) ggaAGGGGGATTCGAACCCCCGCGGGCCGGTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATg < 1:249128/97‑1 (MQ=255) ggaAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGGATTCCTCCAAAATTATATg > 2:124931/1‑97 (MQ=255) gaAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATgg > 1:880499/1‑97 (MQ=255) gaAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATgg > 2:1778716/1‑97 (MQ=255) aaGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGGATTCCTCCACAATTATATGGa > 1:192857/1‑97 (MQ=255) agagGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGAc < 1:1701495/97‑1 (MQ=255) agagGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGAc > 2:331199/1‑97 (MQ=255) agagGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGAc < 1:2220033/97‑1 (MQ=255) agGGATTCGAACCCCCGCGGGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCt < 2:79730/97‑1 (MQ=255) agGGATTCGAACCCCCGCGGCCCGTTAAGGCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCt < 2:1133558/97‑1 (MQ=255) agGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGCCCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCt > 1:288915/1‑97 (MQ=255) agGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCt > 1:1477118/1‑97 (MQ=255) gggATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCtt > 1:1218542/1‑97 (MQ=255) gggATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCtt > 1:1129536/1‑97 (MQ=255) gATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGc < 2:268021/97‑1 (MQ=255) gATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGc < 2:268043/97‑1 (MQ=255) gATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGc > 2:1741358/1‑97 (MQ=255) ttCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAg < 1:1061286/97‑1 (MQ=255) ttCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTCTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAg < 2:2149723/97‑1 (MQ=255) tCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAgg < 1:1970632/97‑1 (MQ=255) cGAACCCCCGCGGCCCGTTAAGGCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGAACTTGCTGGa > 2:1073796/1‑97 (MQ=11) cGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGa > 2:814363/1‑97 (MQ=255) cGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGa > 2:1580420/1‑97 (MQ=255) aCCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTc < 1:153946/97‑1 (MQ=255) cccccGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCg < 2:611427/97‑1 (MQ=255) cccccGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCg > 1:751733/1‑97 (MQ=255) ccccGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGa > 2:1762363/1‑97 (MQ=255) cccGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGaa > 1:1512874/1‑97 (MQ=255) cgcgGGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAAt < 1:1355337/71‑1 (MQ=255) cgcgAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAAcc > 2:2042703/1‑97 (MQ=255) gcgAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCt > 1:952061/1‑97 (MQ=255) | GAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCTGCG > BX571857/1937341‑1937531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |