| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 2,115,959 | T→C | 6.4% | intergenic (+122/+345) | SAS1966 → / ← unknown | threonine dehydratase biosynthetic/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 2,115,959 | 0 | T | C | 6.4% | 440.4 / 9.0 | 129 | intergenic (+122/+345) | SAS1966/unknown | threonine dehydratase biosynthetic/– |
| Reads supporting (aligned to +/- strand): ref base T (80/37); new base C (7/3); total (88/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 139 total aligned reads displayed.
TTGATTTCTAATTGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTACTCTAGCGGAACGT > BX571857/2115864‑2116055 | ttGATTTCTAATTGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCAttt < 2:1624106/97‑1 (MQ=255) tGATTTCTAATTGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCAtttt < 2:1756461/97‑1 (MQ=255) gATTTCTAATTGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCAttttt > 1:647749/1‑97 (MQ=255) tttCTAATTGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCt < 1:566761/97‑1 (MQ=255) cTAATTGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATCTTTCTTtg < 2:943611/97‑1 (MQ=255) aTTGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTgtgt > 1:10726/1‑97 (MQ=255) aTTGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTgtgt > 2:764720/1‑97 (MQ=255) ttGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGtt > 2:497558/1‑97 (MQ=255) ttGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGtt > 1:1933759/1‑97 (MQ=255) tggaaTCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGttt < 1:831027/94‑1 (MQ=255) tGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGttt > 1:1975379/1‑97 (MQ=255) tGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGttt < 1:779602/97‑1 (MQ=255) gAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTg < 2:1409205/97‑1 (MQ=255) gAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTg < 1:2189960/97‑1 (MQ=255) gAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTg > 2:1949049/1‑97 (MQ=255) caaTCATCTTATGCCTGCTTTTTCTCATACCGTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATCTTTCTTTGTGTTTGc < 2:10801/96‑1 (MQ=17) tcatcTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCttt > 1:158148/1‑97 (MQ=255) tcatcTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCttt < 2:1065732/97‑1 (MQ=255) tcatcTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATCTTTCTTTGTGTTTGCttt > 1:1342153/1‑97 (MQ=255) catcTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCtttt > 1:979516/1‑97 (MQ=255) catcTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATCTTTCTTTGTGTTTGCtttt > 2:2253113/1‑97 (MQ=255) atcTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCttttt > 2:1088112/1‑96 (MQ=255) atcTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTa < 1:1667516/97‑1 (MQ=255) atcTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTa < 2:35798/97‑1 (MQ=255) tcTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTAt > 1:614024/1‑97 (MQ=255) tcTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTAt < 1:2172465/97‑1 (MQ=255) cTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTAtt > 2:220097/1‑97 (MQ=255) tATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTAtttt < 1:1671125/97‑1 (MQ=255) tATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTAtttt > 2:514780/1‑97 (MQ=255) aTGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTg > 1:1589076/1‑97 (MQ=255) tGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGa < 2:2042536/97‑1 (MQ=255) tGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATCTTTCTTTGTGTTTGCTTTTATTTTgc > 1:1334152/1‑96 (MQ=255) gccTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGAc < 2:183027/95‑1 (MQ=255) aCTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACg > 1:2152387/1‑97 (MQ=255) aCTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACg > 1:14644/1‑97 (MQ=255) aCTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACg > 1:1421902/1‑97 (MQ=255) aCTGCTTTTTATTATACTTTACATTTCTCGTTCCGTCAGGTTCAAACGGCTTCACTTCGCCAAGCCATTTCTCTGTGTGTTTGCTTTTATCTTGGCg > 2:407811/1‑97 (MQ=18) cTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTCTTTTGACGt > 2:687967/1‑97 (MQ=255) cTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGt < 1:1950954/97‑1 (MQ=255) cTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGt > 2:938417/1‑97 (MQ=255) tGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGtt > 1:1224760/1‑97 (MQ=255) tGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGtt > 2:421464/1‑97 (MQ=255) gCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGCTTCAAACGTTTTCACTTCGCCAAGCCATATTTCATTGTGTTTGCTTTTATTTTGACGttt > 1:265633/1‑97 (MQ=255) gCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGttt < 1:572718/97‑1 (MQ=255) cTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGtttt > 2:1783282/1‑97 (MQ=255) cTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGtttt > 2:679662/1‑97 (MQ=255) tttttATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTa > 2:1632186/1‑97 (MQ=255) ttttATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAg > 1:1737909/1‑97 (MQ=255) tttATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGa < 1:1759173/97‑1 (MQ=255) tattatACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTTGACa > 2:2045765/1‑97 (MQ=255) tattatACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTCGACa > 2:2163302/1‑97 (MQ=255) tattatACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACa > 2:860666/1‑97 (MQ=255) tattatACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACa > 2:2145425/1‑97 (MQ=255) tattatACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACa > 2:479442/1‑97 (MQ=255) tattatACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATCTTTCTTtgt > 1:1278246/1‑69 (MQ=255) tattatACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATCTTTCTTtgt < 2:1278246/69‑1 (MQ=255) attatACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACAt > 1:1412031/1‑97 (MQ=255) ttatACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTCTTTTGACGTTTTAGACATa > 2:789649/1‑97 (MQ=255) tataCTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACCTaa > 1:2174343/1‑97 (MQ=255) ataCTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATaaa < 1:1414594/97‑1 (MQ=255) taCTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATaaaa < 1:8192/97‑1 (MQ=255) taCTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATCTTTCTTTGTGTTTGCTTTTATTTTGGCGTTTTAGACCAaaaa > 2:49314/1‑97 (MQ=14) aCTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATaaaaa < 1:1008039/97‑1 (MQ=255) cTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATaaaaaa > 2:2159003/1‑97 (MQ=255) tACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTTTTTTGGCGTCTTAGGCATAAAAAAagg > 1:1694746/1‑96 (MQ=11) aCATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTTACGTTTTTGACATAAAAAAagag > 2:1638986/1‑97 (MQ=255) cATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTTTTTTGACGTTTTAGACATAAAAAAagagg > 2:1099074/1‑96 (MQ=21) cATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAagagt > 1:2061945/1‑96 (MQ=38) cATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAgaga < 1:63411/97‑1 (MQ=38) aTTTCTCTTTTCGTCAGAATCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGAc < 2:12679/97‑1 (MQ=255) tttCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGAcc < 1:1079399/97‑1 (MQ=35) tttCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGAcc > 1:2132847/1‑97 (MQ=35) tttCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGAcc > 1:268071/1‑97 (MQ=35) ttCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCt > 1:1322476/1‑97 (MQ=35) tctcGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACATTTTAGACATAAAAAAAGAGACCtt > 1:1778186/1‑97 (MQ=25) tcGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGc > 1:1134244/1‑97 (MQ=35) gTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCgg < 1:528578/97‑1 (MQ=35) ttCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGtc > 1:1941039/1‑97 (MQ=35) aGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTTACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACt > 2:1430966/1‑97 (MQ=255) aGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGCCCTTGCGGTCTCAACt > 1:663501/1‑97 (MQ=255) aGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACt > 1:1123188/1‑97 (MQ=38) ttCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGc < 2:1997406/97‑1 (MQ=255) aaCGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTgg > 1:857476/1‑97 (MQ=255) aCGTGTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTATTAGAAATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGt < 2:885902/97‑1 (MQ=255) tttCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACg < 2:10257/97‑1 (MQ=255) ttCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGt > 1:96705/1‑97 (MQ=255) ttCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGt < 2:1549715/97‑1 (MQ=255) aCTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGCCGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTcg < 2:64246/97‑2 (MQ=255) cTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTa > 2:1217332/1‑97 (MQ=255) ttCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTAc < 2:1271141/97‑1 (MQ=255) tCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTAct > 1:1159553/1‑97 (MQ=255) tCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTAct < 2:227476/97‑1 (MQ=255) cGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTActc > 2:1926495/1‑97 (MQ=255) gCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTActct < 2:843980/97‑1 (MQ=255) aaGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTACTCTAGc > 2:1196824/1‑97 (MQ=255) gCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTACTCTAGCgg > 2:671007/1‑97 (MQ=255) ccATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCATCTTGACTGCTAACGTTATACTCTAggtga > 2:1869576/1‑93 (MQ=17) tttttCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTACTCTAGCGGAACg > 1:149284/1‑97 (MQ=255) tttttCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTACTCTAGCGGAACg > 2:1814139/1‑97 (MQ=255) ttttCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTACTCTAGCGCAACGt > 2:2091528/1‑97 (MQ=255) | TTGATTTCTAATTGAAATCATCTTATGACTGCTTTTTATTATACTTTACATTTCTCGTTTCGTCAGATTCAAACGTTTTCACTTCGCCAAGCCATTTTTCTTTGTGTTTGCTTTTATTTTGACGTTTTAGACATAAAAAAAGAGACCTTGCGGTCTCAACTTGCCTGGTAACGTTCTACTCTAGCGGAACGT > BX571857/2115864‑2116055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |