Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	BX571857	1878507	1878563	57	3 [2]	[2] 3	SAS1729	conserved hypothetical protein (pseudogene)

AAATAAAAGCGGAGATAATTCTTTTTTTAATAATTCAATAGCGTGATCTTGCTTATTTATGTTTAAATTCAAAAACTCTTCGCATAAGTCTTGAGTTAAAATAATATCTTTTTTACTATCGAATAATATATTATGTGGATTT  >  BX571857/1878520‑1878661                                             |                                                                                                  aaaTAAAAGCGGAGATAATTCTTTTTTTAATAATTCAATAGCGTGATCTTGCTTATTTATGTTTAAATTCAAAAACTCTTCGCATAAGTCTTGAGTTa                                              <  1:237558/98‑1 (MQ=255)                                     aaTAGCGTGATCTTGCTTATTTATGTTTAAATTCAAAAACTCTTCGCATAAGTCTTGAGTTAAAATAATATCTTTTTTACTATCGAATAATAtattat          <  2:302203/98‑1 (MQ=255)                                             gATCTTGCTTATTTATGTTTAAATTCAAAAACTCTTCGCATAAGTCTTGAGTTAAAATAATATCTTTTTTACTATCGAATAATATATTATGTGGAttt  >  1:135925/1‑98 (MQ=255)                                             |                                                                                                  AAATAAAAGCGGAGATAATTCTTTTTTTAATAATTCAATAGCGTGATCTTGCTTATTTATGTTTAAATTCAAAAACTCTTCGCATAAGTCTTGAGTTAAAATAATATCTTTTTTACTATCGAATAATATATTATGTGGATTT  >  BX571857/1878520‑1878661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑