| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 2,597,224 | C→T | 16.4% | intergenic (‑67/+66) | SAS2421 ← / ← SAS2422 | putative exported protein/conserved hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 2,597,224 | 0 | C | T | 16.4% | 370.9 / 74.4 | 129 | intergenic (‑67/+66) | SAS2421/SAS2422 | putative exported protein/conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (50/57); new base T (7/14); total (57/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.99e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
AACGCAAGTGTAGACCATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGACATCGTTATTTACAC > BX571857/2597129‑2597318 | aaCGCAAGTGTAGACCATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTAcc < 2:220739/97‑1 (MQ=255) cGCAAGTGTAGACCATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCaa < 2:1128579/97‑1 (MQ=255) cGCAAGTGTAGACCATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCaa < 1:857616/97‑1 (MQ=255) cGCAAGTGTAGACCATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCaa < 1:1209865/97‑1 (MQ=255) gCAAGTGTAGACCATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTATCAat < 1:1239429/97‑1 (MQ=255) gCAAGTGTAGACCATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTATCAat > 1:882089/1‑97 (MQ=255) aGTGTAGACCATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTATCAATAtt < 1:753361/97‑1 (MQ=255) gACCATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTgg > 1:270230/1‑97 (MQ=255) gACCATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTgg > 2:748229/1‑97 (MQ=255) aCCATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTggg < 1:290088/97‑1 (MQ=255) ccATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGa < 2:367872/97‑1 (MQ=255) ccATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGa > 2:1048019/1‑97 (MQ=255) cATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTATCAATATTTACTGGGaa < 2:356828/97‑1 (MQ=255) cATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGaa > 2:919586/1‑97 (MQ=255) aTTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGaaa > 1:714739/1‑97 (MQ=255) aTTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATCTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGaaa > 1:238049/1‑97 (MQ=255) ttttttACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTATCAATATTTACTGGGAAAt < 2:682161/97‑1 (MQ=255) ttttttACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAAt < 2:915899/97‑1 (MQ=255) tttttACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATa > 2:1372420/1‑97 (MQ=255) ttttACGCCTTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATaa < 2:1293722/97‑1 (MQ=255) ttttACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATaa < 1:695904/97‑1 (MQ=255) ttttACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATaa > 1:1075674/1‑97 (MQ=255) ttACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGt < 2:1068796/97‑1 (MQ=255) aCGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTATCAATATTTACTGGGAAATAAGTTa < 1:1031269/97‑1 (MQ=255) cGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTat < 2:1529581/97‑1 (MQ=255) cGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTat < 2:55474/97‑1 (MQ=255) gCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTatg > 2:931424/1‑97 (MQ=255) cATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGCTTCTTATTACTACCAATATTTACTGGGAAATAAGTTatga < 2:1067347/97‑1 (MQ=255) aTTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTatgat > 1:1351987/1‑97 (MQ=255) tttGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTATCAATATTTACTGGGAAATAAGTTatgatg < 2:109989/97‑1 (MQ=255) tttGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCACTATTTACTGGGAAATAAGGTatgatg > 2:372198/1‑97 (MQ=255) tttGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTatgatg < 1:1237665/97‑1 (MQ=255) ttGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTATCAATATTTACTGGGAAATAAGTTATGATGt > 1:106811/1‑97 (MQ=255) tGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTATCAATATTTACTGGGAAATAAGTTATGATGTc < 1:622926/97‑1 (MQ=255) tGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCATTATTCACTGGGAAATTAGTTATGATGTc > 1:1342747/1‑97 (MQ=255) tGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTc < 1:255982/97‑1 (MQ=255) tcgtcACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTa < 2:129140/97‑1 (MQ=255) tcgtcACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTa < 1:877228/97‑1 (MQ=255) tcgtcACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTa < 1:1373135/97‑1 (MQ=255) gtcACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACa > 2:884684/1‑97 (MQ=255) tcACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACAt < 2:677389/97‑1 (MQ=255) tcACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACAt < 2:471230/97‑1 (MQ=255) cACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTCTGATGTCTACATa > 1:1422258/1‑97 (MQ=255) cACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATa < 1:540164/97‑1 (MQ=255) aCTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATaa > 2:534453/1‑97 (MQ=255) ctcctcTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAAt > 2:1181902/1‑97 (MQ=255) ctcctcTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAAt > 2:1181614/1‑97 (MQ=255) cctcTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCt < 1:325315/97‑1 (MQ=255) ctctTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCtt < 1:1419929/97‑1 (MQ=255) tctTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTa < 2:132522/97‑1 (MQ=255) ctTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAg > 2:972164/1‑97 (MQ=255) tttGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTATCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGc < 1:117572/97‑1 (MQ=255) tttGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGc < 2:1502917/97‑1 (MQ=255) tttGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGc < 1:1513363/97‑1 (MQ=255) tttGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGc < 1:1555995/97‑1 (MQ=255) ttGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCa < 1:385606/97‑1 (MQ=255) tgatTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGc > 2:890543/1‑97 (MQ=255) gatTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCt > 1:390017/1‑97 (MQ=255) gatTTCTACTATAGTTCTACCGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCt < 2:950391/97‑1 (MQ=255) atTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTa < 1:1203244/97‑1 (MQ=255) atTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTa > 2:1570107/1‑97 (MQ=255) atTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTa > 2:1569984/1‑97 (MQ=255) tttCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTATCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTaa < 1:1483659/97‑1 (MQ=255) ttCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAAt > 2:1377324/1‑97 (MQ=255) ctacttTAGTTCTGCTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCa < 2:626243/97‑1 (MQ=255) ctactaTAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCa < 2:1145247/97‑1 (MQ=255) ctactaTAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCa < 1:476775/97‑1 (MQ=255) tactaTAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCAt > 2:181517/1‑97 (MQ=255) actaTAGTTCTACTGTACCATGCTGATTCTTATTACTATCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCAtt < 1:1450676/97‑1 (MQ=255) actaTAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCAtt < 1:566478/97‑1 (MQ=255) ataGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGc > 2:31250/1‑97 (MQ=255) taGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCg > 1:987574/1‑97 (MQ=255) aGTTCTACTGTACCATGCTGATTCTTATTACTATCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGa < 2:1298708/97‑1 (MQ=255) gTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGat < 1:76989/97‑1 (MQ=255) gTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGat > 1:629333/1‑97 (MQ=255) cTACTGTACCATGCTGATTCTTATTACTATCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATAtt > 1:1477692/1‑97 (MQ=255) cTACTGTACCATGCTGATTCTTATTACTATCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATAtt > 1:1477467/1‑97 (MQ=255) cTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATAtt > 2:1553838/1‑97 (MQ=255) cTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATAtt > 1:1160529/1‑97 (MQ=255) tACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTa < 1:1348234/97‑1 (MQ=255) cTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAAt < 2:1136653/97‑1 (MQ=255) cTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAAt < 2:1136588/97‑1 (MQ=255) gTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGc < 2:758633/97‑1 (MQ=255) ccATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCa < 2:1084142/97‑1 (MQ=255) aTGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATc > 1:1173656/1‑97 (MQ=255) aTGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATc > 1:755383/1‑97 (MQ=255) gCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGa < 1:443107/97‑1 (MQ=255) cTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGAc < 1:1507515/97‑1 (MQ=255) cTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGAc > 1:112126/1‑97 (MQ=255) tGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGACa < 1:1372420/97‑1 (MQ=255) aTTCTTATTACTATCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGACATc > 1:1539537/1‑97 (MQ=255) ttCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGACATct > 1:1124961/1‑96 (MQ=255) tCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGACATCGt > 1:176687/1‑97 (MQ=255) cTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGACATCGtt < 1:1207409/97‑1 (MQ=255) ttattaCTATCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGACATCGTTa < 2:227631/97‑1 (MQ=255) attaCTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGACATCGTTAtt < 2:809698/97‑1 (MQ=255) attaCTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGACATCGTTAtt < 1:1136974/97‑1 (MQ=255) attaCTAACACTATTTGCTAGAAAAGAAGCTATTATGTCTACATATTTTCAGCAAGGCTAATCCGTTGCGCTATTAGTGCTCATCGACATCGTTAtt < 2:1014883/97‑1 (MQ=255) actacCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGACATCGTTATTTac > 2:342216/1‑97 (MQ=255) ctacCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGACATCGTTATTTaca < 1:290002/97‑1 (MQ=255) | AACGCAAGTGTAGACCATTTTTTACGCATTTGTCGTCACTCCTCTTTGATGATTTCTACTATAGTTCTACTGTACCATGCTGATTCTTATTACTACCAATATTTACTGGGAAATAAGTTATGATGTCTACATAATCTTAGCAATGCTAATCATTTGCGATATTAATGCTCATCGACATCGTTATTTACAC > BX571857/2597129‑2597318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |