| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571858 | 20,628:1 | +G | 100% | coding (288/306 nt) | pSAS24 → | putative exported protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571858 | 20,628 | 1 | . | G | 99.6% | 1003.7 / ‑3.4 | 224 | K96K (AAA→AAG) | pSAS24 | putative exported protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); major base G (113/109); minor base T (1/0); total (115/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 245 total aligned reads displayed.
GTTATAAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAA‑A‑TATTCCTAGCTTTTTAAAATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G > BX571858/20531‑20652 | ttATAAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACaaaag > 2:1776035/1‑97 (MQ=255) ttATAAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACaaaag < 1:338605/98‑2 (MQ=255) ataAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACaaaagat < 2:2872497/98‑4 (MQ=255) taAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACaaaagata > 1:647185/1‑94 (MQ=255) aTTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTc > 2:2268152/1‑98 (MQ=255) ttGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTcc > 1:374948/1‑98 (MQ=255) tGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCt > 2:1068803/1‑98 (MQ=255) aTTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGc > 2:1264393/1‑98 (MQ=255) tttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCtt > 2:3111740/1‑98 (MQ=255) ttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCttt > 2:560422/1‑98 (MQ=255) ttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCttt > 2:1355767/1‑98 (MQ=255) ttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCttt > 1:959409/1‑98 (MQ=255) ttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAGTCATAAAGGAAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCttttt < 1:866325/98‑1 (MQ=255) ttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCttttt > 1:3087626/1‑98 (MQ=255) ttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCttttt > 2:1800605/1‑98 (MQ=255) aGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTaa > 2:2748023/1‑98 (MQ=255) gTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTaaaa < 1:3194680/98‑1 (MQ=255) tATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATg < 2:268327/98‑1 (MQ=255) tGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAg > 1:1086908‑M2/1‑97 (MQ=255) tGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAg > 2:2531536‑M2/1‑97 (MQ=255) gATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAgg < 1:3276865‑M2/98‑3 (MQ=255) aTCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggt > 1:2382960‑M2/1‑95 (MQ=255) tCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtg > 1:3274827‑M2/1‑94 (MQ=255) ccTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtga > 1:505415‑M2/1‑93 (MQ=255) ccTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtga < 1:653064‑M2/98‑6 (MQ=255) aaaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgat < 2:3316505‑M2/98‑11 (MQ=255) aaaaGAATATGTGAAAGTAAATCATAAAGAGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgat < 1:1412288‑M2/98‑11 (MQ=255) aaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgata > 1:591667‑M2/1‑87 (MQ=255) aaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatag > 1:1255394‑M2/1‑86 (MQ=255) aGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagt > 2:635952‑M2/1‑85 (MQ=255) gAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtg > 2:1834055‑M2/1‑84 (MQ=255) aaTATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtga > 1:118968‑M2/1‑83 (MQ=255) aaTATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtga < 1:1157466‑M2/98‑16 (MQ=255) tatGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgata < 1:2360159‑M2/98‑18 (MQ=255) atGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataa < 1:2096945‑M2/98‑19 (MQ=255) atGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataa > 2:1034632‑M2/1‑80 (MQ=255) tgtgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaa > 1:15965‑M2/1‑79 (MQ=255) tgtgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaa > 1:1677746‑M2/1‑79 (MQ=255) tgtgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaa > 2:3220698‑M2/1‑79 (MQ=255) tgtgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaa > 1:2085338‑M2/1‑79 (MQ=255) gtgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaa < 1:390647‑M2/98‑21 (MQ=255) tgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaac > 2:2370158‑M2/1‑77 (MQ=255) gAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaact > 2:761594‑M2/1‑76 (MQ=255) gAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaact > 2:640661‑M2/1‑76 (MQ=255) aaGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttg < 1:539171‑M2/98‑25 (MQ=255) gTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaa < 2:2793397‑M2/98‑27 (MQ=255) tAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaa < 2:1771992‑M2/98‑28 (MQ=255) tAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaa > 1:186794‑M2/1‑71 (MQ=255) aaaTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaa < 1:3337382‑M2/98‑29 (MQ=255) aaTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaat > 2:1565739‑M2/1‑69 (MQ=255) aTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatg > 2:2743238‑M2/1‑68 (MQ=255) aTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatg < 1:26573‑M2/98‑31 (MQ=255) aTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatg < 2:30066‑M2/98‑31 (MQ=255) aTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatg > 2:2383991‑M2/1‑68 (MQ=255) cATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtt > 1:2732580‑M2/1‑66 (MQ=255) cATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtt < 1:1927661‑M2/98‑33 (MQ=255) aTAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgttt > 2:2438004‑M2/1‑65 (MQ=255) aTAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgttt > 1:102639‑M2/1‑65 (MQ=255) tAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgactgatagtgatataacttgaaaatgtttt < 2:463208‑M2/98‑35 (MQ=255) tAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttt < 2:3257809‑M2/98‑35 (MQ=255) aaaGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgttttt < 2:13764‑M2/98‑36 (MQ=255) aGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgt > 2:2908863‑M2/1‑61 (MQ=255) aGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgt > 2:1648907‑M2/1‑61 (MQ=255) gggAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgta > 1:1010562‑M2/1‑60 (MQ=255) gggAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgta < 1:993087‑M2/98‑39 (MQ=255) ggAAATATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaa < 2:58257‑M2/98‑40 (MQ=255) aaTATGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaa < 1:2200830‑M2/98‑43 (MQ=255) aaTATGTGCGGTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaa < 1:1816689‑M2/98‑43 (MQ=255) atatGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaa < 1:1350214‑M2/98‑44 (MQ=255) atatGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaa < 1:910307‑M2/98‑44 (MQ=255) atatGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaa < 1:722096‑M2/98‑44 (MQ=255) atatGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaa < 1:2143333‑M2/98‑44 (MQ=255) tatGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatcgtgataaaacttgaaaatgtttttgtaaaaaaa < 2:2390560‑M2/98‑45 (MQ=255) atGTGCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaag > 2:2121994‑M2/1‑53 (MQ=255) gtgCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggt > 1:15415‑M2/1‑51 (MQ=255) tgCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAATTTTAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggta < 2:1543116‑M2/98‑49 (MQ=255) tgCGTTCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggta > 1:2576002‑M2/1‑50 (MQ=255) ttCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataa < 1:595093‑M2/98‑53 (MQ=255) tCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaa < 1:3146976‑M2/98‑54 (MQ=255) tCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaa < 2:3168820‑M2/98‑54 (MQ=255) tCGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaa < 1:1004582‑M2/98‑54 (MQ=255) cGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaa > 2:3320173‑M2/1‑44 (MQ=255) cGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaa > 2:9283‑M2/1‑44 (MQ=255) cGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaa > 1:2710880‑M2/1‑44 (MQ=255) cGATAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaa < 1:2920456‑M2/98‑55 (MQ=255) aTAGAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaac < 1:3053092‑M2/98‑57 (MQ=255) aTAAAATACATAACAAAA‑AATATTCCTAGCATTTTAAAATGAggtgaacgatagtgataaaacttaaaaatgtttttgtaaaaaaaggtaataaaaac > 2:3088462‑M2/1‑42 (MQ=255) gAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATTAggtgaccgatagtgataaaacttgaaaatgtttttgtaaataaaggtaataaaaacatt < 2:1951712‑M2/98‑60 (MQ=255) gAATACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatt > 2:1196930‑M2/1‑39 (MQ=255) aTACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttt < 2:378338‑M2/98‑62 (MQ=255) aTACATTAAAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttt > 2:2984461‑M2/1‑37 (MQ=255) tACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttta < 1:2162089‑M2/98‑63 (MQ=255) tACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttta < 2:2217581‑M2/98‑63 (MQ=255) tACATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttta < 2:1794899‑M2/98‑63 (MQ=255) aCATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttag > 1:2993582‑M2/1‑35 (MQ=255) aCATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttag > 1:1770714‑M2/1‑35 (MQ=255) aCATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttag < 1:1648011‑M2/98‑64 (MQ=255) aCATTACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttag < 1:330955‑M2/98‑64 (MQ=255) tACAAAAGA‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacgg > 1:279709‑M2/1‑31 (MQ=255) aag‑a‑TATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatgta < 1:1299936‑M2/98‑73 (MQ=255) | GTTATAAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAA‑A‑TATTCCTAGCTTTTTAAAATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G > BX571858/20531‑20652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |