| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BX571857 | = 546972 | 215 (0.970) | 3 (0.020) | 3/144 | NT | 1.4% | coding (179/888 nt) | SAS0476 | putative pyridoxine biosynthesis protein |
| ? | BX571857 | 547444 = | 243 (1.320) | coding (651/888 nt) | SAS0476 | putative pyridoxine biosynthesis protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > BX571857/546863‑546972‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggtggcgttgcGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTG > BX571857/547444‑547538 ATGGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTG > 2:2209618/1‑97ATGGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTG > 1:1368827/1‑97ATGGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTG < 1:490609/97‑1 GGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCT < 1:1235692/97‑1 GGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCT < 1:3650914/97‑1 GATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTG > 1:304473/1‑97 GATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTG > 2:8593/1‑97 GATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTG < 1:3428901/97‑1 GATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTG < 1:3428686/97‑1 GATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCAGCTG > 2:3443539/1‑97 TGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGGGCTGCTGGT > 1:713245/1‑97 TGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGT < 1:2253781/97‑1 TGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGT > 1:2868311/1‑97 GTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTG > 1:615226/1‑97 TCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGG > 1:2967583/1‑97 TCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGG > 1:268215/1‑97 CGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGC < 2:1119457/97‑1 CGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGC > 2:410863/1‑97 GTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCG > 2:1604760/1‑97 GTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCG > 1:3037829/1‑97 GTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCG > 1:328742/1‑97 TAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTT > 2:1507276/1‑97 TAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTT > 1:869796/1‑97 TAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTT > 2:1209948/1‑97 AATGCTGAGCAAGCAAGAATTGCAGAAGGAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTG < 1:1192710/97‑1 AATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTGCCTTCTGATATTAGAGCTGCTGGTGGCGTTG < 1:1392498/97‑1 AATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTG > 1:2368181/1‑97 AATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTG > 2:2970649/1‑97 AATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTG > 1:1668302/1‑97 AATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTG < 1:2867310/97‑1 AATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTG < 1:1192399/97‑1 AATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTG > 2:1134372/1‑97 AATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGATATGGCCTTAGAACGAGCACCTTCTGATATTAGAGCTGCTGGTGGCGTTG > 2:198772/1‑97 ATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTGC < 2:1481363/97‑1 AGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATG > 2:921165/1‑97 ACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAAGTAGGTGCCGCCGGTGTTTTCGTTGGA > 2:512003/1‑97 ATTAGAGCTGCTGGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAAT < 2:3060790/97‑1 GCTGGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATC < 2:293950/97‑1 TGGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCA > 1:918739/1‑97 TGGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCA > 2:1270902/1‑97 GGTGGCGTTGCGACTCCTGAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAGTCAGAAGATCCAG < 1:1421442/97‑1 GGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAG > 1:1955069/1‑97 GTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGA > 1:975122/1‑97 GTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGA > 2:835087/1‑97 GGCGTTGCGGCTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAA < 2:1188390/97‑1 GGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAA < 1:25746/97‑1 GGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAA < 1:1466147/97‑1 GGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAA < 1:228398/97‑1 GGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAA < 2:3215883/97‑1 GGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAA > 1:3340754/1‑97 GGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAA < 2:2337867/97‑1 GCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAA > 2:315744/1‑97 GCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAA > 2:3014998/1‑97 CGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAA < 2:1532617/97‑1 CGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAA < 1:2536464/97‑1 CGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAA < 2:3255827/97‑1 CGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAA < 1:1848844/97‑1 GTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAAT > 1:944184/1‑97 GTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAAT < 2:2136812/97‑1 GTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAAT > 2:183425/1‑97 GTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTCGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAAT > 1:1139003/1‑97 TTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATT < 2:432944/97‑1 TGCGGCTCCTCATGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTGAATCAGAAGATCCAGAAATATTT < 2:1443565/97‑1 TGCGACTCCTCAAGATGCTGCTTTAATGATGGAATCAGGTGCCGACGGTGTATTCGTTGGAGCAGGTATTATTAAATCAGAAGATACAGAAAAATTT > 2:2932112/1‑97 GCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTATTTTTGATGATCCAGAAAAATTTG > 2:862231/1‑97 GCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTG > 2:2148416/1‑97 GCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTG > 1:2797269/1‑97 GCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTG < 2:1251835/97‑1 GCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTG < 1:1365607/97‑1 GCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTG > 2:862183/1‑97 ATGGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > BX571857/546863‑546972‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggtggcgttgcGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTG > BX571857/547444‑547538 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |