| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BX571857 | = 780662 | 200 (0.910) | 3 (0.020) | 3/142 | NT | 1.7% | intergenic (+178/‑530) | SAS0697/SAS0698 | ribonucleoside‑diphosphate reductase beta chain/FecCD transport family protein |
| ? | BX571857 | 780833 = | 183 (1.010) | intergenic (+349/‑359) | SAS0697/SAS0698 | ribonucleoside‑diphosphate reductase beta chain/FecCD transport family protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTGAAGGTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCCCCAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > BX571857/780552‑780662‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggggccccaacaTAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAATGTTA > BX571857/780833‑780928 TTGAAGGTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTG > 1:2858192/1‑97 TGAAGGTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGG < 1:234150/97‑1 GAAGGTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGC > 2:2158364/1‑97 AAGGTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCG < 1:310038/97‑1 AAGGTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCG < 1:1538419/97‑1 GGTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGG > 1:1555050/1‑97 GGTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGG > 1:1730406/1‑97 GGTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGG < 1:1817907/97‑1 GGTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGG < 1:1833022/97‑1 GGTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGG < 1:1833654/97‑1 GTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGG > 1:3497777/1‑97 CTTTTTTTATTTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATTTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCC > 2:2497343/1‑97 CTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCC < 2:460215/97‑1 CTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCC < 2:2117584/97‑1 CTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCC > 1:2758434/1‑97 TTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCCC > 1:2556500/1‑97 TTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCCC > 1:2887331/1‑97 TTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCCCC > 1:1584811/1‑97 TTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCCCC < 2:637334/97‑1 TTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTGTATTGGCAGTAGTTGGCGGGGCCCCAACA < 1:2848049/97‑1 TTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCCCCAAaa > 2:1396566/1‑95 TTATGTGTATCTAACTCATTATGAGTCTGAGGAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCCCCAACA < 1:2848048/97‑1 ATGAGTCTGAGTACGAAATCAATGCTCTACGAAGTACAAGGTTATTTATATTGGCAGGAGTTGGCGGGGCCCCAACATAAAGAAAAACTTTTTCCTT < 2:3447359/97‑1 AGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCCCCAACATAAAGAAAAACTTTTTCCTTTAG < 2:1224325/97‑1 cgGAGTCAGAAATCAATGCTCGAAGATGAACAAGGTTATTTTTATGGGCAGTAGTTGGCGGGGCCCCAACATAAAGAAAAACTTTTTCCTTTAGAAA < 2:3153429/95‑1 GCGGGGCCCCAACATAAAGAAAAACTTTTTTCTTTATATATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCT > 2:585041/1‑97 GCGGGGCCCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCT < 2:621618/97‑1 GCGGGGCCCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCT < 2:665184/97‑1 GCGGGGCCCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCT < 1:827899/97‑1 GCGGGGCCCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCT < 2:2727499/97‑1 CGGGGCCCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTG > 2:2604893/1‑97 CGGGGCCCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTG > 1:3046223/1‑97 CGGGGCCCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGGTTTACTCATGTATTCCTATGTTTAAGTACACATTAGCTG > 1:3046224/1‑97 GGGGCCCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGA < 2:1730788/97‑1 GGGCCCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAG < 1:292192/97‑1 GGGCCCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAG < 1:1889303/97‑1 GGCCCCAACATAAAGAAAAACCTTTTCCTTAAGAAATTATCTCTTCCACATGAGTTTTACTCACGTATTCCTATTTTTAAGTACACATTAGCTGAGG < 1:2073913/97‑1 CCCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCT < 2:2818107/97‑1 CCCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCT < 2:419091/97‑1 CCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTA < 1:2252665/97‑1 CCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTA < 2:2882194/97‑1 CCCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTA > 1:255357/1‑97 CCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCCCATGCGCCTCACTCATGTATTCCTATTCTTAAGTACACATTCGCTGAGGCTca > 2:2577792/1‑95 CCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAA < 1:2584452/97‑1 CCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAA < 1:2939272/97‑1 CCAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAA < 1:581022/97‑1 CAACATAAAGAGAAACTTTTTCCTTTAGACATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAAT < 2:1235037/97‑1 CAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAAT < 1:1255325/97‑1 CAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAAT < 1:3666428/97‑1 CAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAAT < 2:3646459/97‑1 CAACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAAT < 1:2272047/97‑1 AACATAAAGAAATACTTTTTCCTTTAGAAATTATCACTGCCACATGTGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAATG < 1:18450/97‑1 AACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAATG < 1:1861480/97‑1 AACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAATG > 1:1007519/1‑97 ACATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAATGT < 2:55564/97‑1 ATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAATGTTA > 1:2547258/1‑97 ATAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAATGTTA > 1:1319331/1‑97 TTGAAGGTCTTTTTTTATGTGTATCTAACTCATTATGAGTCTGAGTAAGAAATCAATGCTCTAAGATGTACAATGTTATTTATATTGGCAGTAGTTGGCGGGGCCCCAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > BX571857/780552‑780662‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggggccccaacaTAAAGAAAAACTTTTTCCTTTAGAAATTATCACTTCCACATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGAGGCTAATGTTA > BX571857/780833‑780928 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |