| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BX571857 | = 1937218 | 206 (0.930) | 3 (0.020) | 3/150 | NT | 1.5% | noncoding (65/93 nt) | tRNA Ser anticodon TGA_ Cove score 74.09 | tRNA‑Ser |
| ? | BX571857 | 1937634 = | 204 (1.060) | noncoding (48/77 nt) | tRNA Met anticodon CAT_ Cove score 82.22 | tRNA‑Met | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > BX571857/1937112‑1937218‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaacccccgACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGAACCG > BX571857/1937634‑1937728 CGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATT > 2:889002/1‑97CGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATT > 2:2888572/1‑97CGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAAGAATGGCGGAGGAAGAGGGATT > 2:2144300/1‑97 GATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCG < 2:3425273/97‑1 GATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCG < 1:2807841/97‑1 ATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGA < 1:815141/97‑1 ATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGA < 1:2561429/97‑1 TTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAA > 1:1130105/1‑97 TTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAA > 1:1205598/1‑97 TTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAA < 1:1253354/97‑1 TTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAA > 1:1130093/1‑97 TTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAA > 1:946120/1‑97 TTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAA > 1:39815/1‑97 TTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAA > 1:1905127/1‑97 TTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAAC > 1:1976377/1‑97 TGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACC < 1:1097391/97‑1 TGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACC > 1:646282/1‑97 TGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACC < 1:1541856/97‑1 TGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCAATCCCGCGATCATAAAAAACAATGGCGGAGGAAGAGGGATTCGAACC > 1:1059427/1‑97 GAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCC > 1:2279064/1‑97 GAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCC < 1:1882005/97‑1 AAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGT < 1:2419822/97‑1 AATAATGGCGGAGGAAGAGGGATTCGAACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCA > 1:2062548/1‑66 AATAATGGCGGAGGAAGAGGGATTCGAACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCA < 2:2062547/66‑1 TCGCACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGG < 1:3191890/97‑1 TCGAACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGG < 2:3030069/97‑1 TCGAACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGG > 2:2005061/1‑97 CGAACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCGGCTGAGCTACACCGCCTTATACAGTTTGTAAATAATATGGTGGAGACTAGCGGGA > 2:782069/1‑97 CGAACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGA > 1:1818026/1‑97 CGAACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGA > 2:3386450/1‑97 CGAACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGA > 1:1445753/1‑97 GAACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGAT > 1:1302329/1‑97 AACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATC < 2:3443614/97‑1 ACCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCG < 1:2676015/97‑1 CCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGGGCTACACCGCCTTATATAGTTTGTAAATAAGATGGTGGAGACTAGCGGGATCGA < 2:1389658/97‑1 CCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGA < 2:296839/97‑1 CCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGA < 1:3119855/97‑1 CCCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGA < 2:3670207/97‑1 CCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGAA > 2:2826852/1‑97 CCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGAA > 2:3093242/1‑97 CCCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGAA > 1:3040298/1‑97 CCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGAAC > 1:1402942/1‑97 CCCGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGAAC > 1:1346258/1‑97 CGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGAACCG < 1:2356629/97‑1 CGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGAACCG < 1:757843/97‑1 CGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGAACCG < 1:1775532/97‑1 CGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGAACCG > 2:755945/1‑97 CGACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGAACCG > 1:2270753/1‑97 CGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCATCCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > BX571857/1937112‑1937218‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaacccccgACCTCACGGGTATGAACCGTACGCTCTAGCCAGCTGAGCTACACCGCCTTATATAGTTTGTAAATAATATGGTGGAGACTAGCGGGATCGAACCG > BX571857/1937634‑1937728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |