| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 391,456 | C→A | 6.0% | intergenic (+74/+192) | SAS0343 → / ← SAS0344 | 30S ribosomal protein S18/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 391,456 | 0 | C | A | 6.0% | 970.8 / 18.3 | 245 | intergenic (+74/+192) | SAS0343/SAS0344 | 30S ribosomal protein S18/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (101/127); new base A (2/15); total (103/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.57e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 247 total aligned reads displayed.
CATATGTTAAAGAAGAACAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAAC > BX571857/391360‑391552 | cATATGTTAAAGAAGAACAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGc > 1:2814059/1‑97 (MQ=255) atatGTTAAAGAAGAACAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCa > 1:501162/1‑97 (MQ=255) tatGTTAAAGAAGAACAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCaa > 2:3272239/1‑97 (MQ=255) tatGTTAAAGAAGAACAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCaa < 1:17831/97‑1 (MQ=255) tatGTTAAAGAAGAACAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCaa > 1:731605/1‑97 (MQ=255) tAAAGAAGAACAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAg < 1:2493530/97‑1 (MQ=255) aaaGAAGAACAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAgg < 2:1966596/97‑1 (MQ=255) aagaagAACAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTATGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGga > 1:789112/1‑97 (MQ=255) agaagaACAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGgat < 2:601605/97‑1 (MQ=255) gaagaaCAATAATTTATAATTTCTTGTCAAACCTCGTAGGCATAGGCTTTCGGGGCTTTTTGTGTTTTGGGGTATTGATAAAGGGCAAAATAGgatg < 2:312073/97‑1 (MQ=255) gaagaaCAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGgatg > 1:4645/1‑97 (MQ=255) gaaCAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGatgatg > 1:2892234/1‑97 (MQ=255) aaCAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGAtgt > 1:3261568/1‑97 (MQ=255) aCAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGAtgtg < 1:1052125/97‑1 (MQ=255) cAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGa > 1:1586896/1‑97 (MQ=255) aataatATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGaa > 1:2578883/1‑97 (MQ=255) aataatATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTGGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGaa < 2:3234898/97‑1 (MQ=255) ataataTATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAAt < 1:415832/97‑1 (MQ=255) ataataTATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAAt < 1:3478296/97‑1 (MQ=255) ataataTATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAAt < 1:2609227/97‑1 (MQ=255) aataTATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAACGGGCAAAAAAGGATGATGTGAATGt < 1:2700421/97‑1 (MQ=255) aaaatataATTTATTGTCAAACCCCGTAGGCATAAGCTTACGGGGCTTTTTGTGTTTTGGGGTATAAAAAAAAAGAAAAAAAGGATGATGTGAATGt < 2:1612959/94‑1 (MQ=255) atatatAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGtt < 1:2848692/97‑1 (MQ=255) tatataATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGttt < 1:2105526/97‑1 (MQ=255) atataATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGtttt < 1:2390062/97‑1 (MQ=255) atataATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGtttt < 1:2295771/97‑1 (MQ=255) atagaATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGAAAAAAAAAGGATGATGTGAATGtttt < 2:140068/97‑1 (MQ=255) tataATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGCGTTTTGGGGTATAGAAACAGGGCAAAAAAGGATGATGTGCATGTTTtg > 1:1599559/1‑97 (MQ=255) ataATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTtgt < 2:2132809/97‑1 (MQ=255) aTTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGCAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGtt > 2:116291/1‑97 (MQ=255) ttATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCg > 1:2054737/1‑97 (MQ=255) ttGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAAAGAAAAAAAGGATGATGTGAATGTTTTGTGTTCGGaa < 2:1781019/97‑1 (MQ=255) ttGTCAAACCCCGTAGGCATAGGCTTAAGGGGCTTTTTGTGTTTTGGGGTATAAAAAAAAAAAAAAAAAGGATGATGTGAATGTTTTGTGTTCGGaa < 2:1480164/97‑1 (MQ=255) tggcAAACCCCGTAGGCGTAGGCTTACGGGGCTTTTGGTGGTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAAt < 2:3383057/94‑1 (MQ=255) cgccAACCCCCGTCGGCATAGGCGTACGTGGCGTTTTGTGGTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAAt < 2:2225755/94‑1 (MQ=255) gTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAAtt > 2:1954572/1‑97 (MQ=255) gTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAAtt > 1:529249/1‑97 (MQ=255) tCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAAttt > 2:1108867/1‑97 (MQ=255) cAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTg > 1:3342640/1‑97 (MQ=255) aaaCCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGc < 2:2092600/97‑1 (MQ=255) aaaCCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGc > 2:1671385/1‑97 (MQ=255) aaaCCCCGTAGGAAAAGGCTGACGGGGATGTTTGTGTTTTGGGGTATAGAAAAAGAAAAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGc < 2:2517592/97‑1 (MQ=255) aaCCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGca < 1:2420619/97‑1 (MQ=255) aCCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGcac > 1:3189132/1‑97 (MQ=255) ccccGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGcaca < 1:632069/97‑1 (MQ=255) ccccGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGcaca < 1:192893/97‑1 (MQ=255) ccccGTAGGCATAGGCTTACGGGGCTTTTTGTGTGTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGcaca > 1:3207431/1‑97 (MQ=255) cGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAg < 2:1841229/97‑1 (MQ=255) aGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGata < 2:2358469/97‑1 (MQ=255) aGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGata < 1:2013471/97‑1 (MQ=255) aGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGata > 2:3012755/1‑97 (MQ=255) ggCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGatat > 1:817003/1‑97 (MQ=255) ggCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGatat < 1:303058/97‑1 (MQ=255) ggCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGatat < 1:2198003/97‑1 (MQ=255) ggCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGatat < 1:2224324/97‑1 (MQ=255) ggCATAGGATTACGGGGCTTTTTGTGTTTTGGTGGATAGAAAAAGAGAAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGatat < 2:25820/97‑1 (MQ=255) gCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATg < 1:995115/97‑1 (MQ=255) cATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGt > 1:2413896/1‑97 (MQ=255) aTAGACTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAAAGAAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGtt < 2:1338262/97‑1 (MQ=255) tAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGttt > 1:557343/1‑97 (MQ=255) tAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGttt > 1:1682100/1‑97 (MQ=255) tAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGttt > 2:2881298/1‑97 (MQ=255) aGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTta > 2:2272749/1‑97 (MQ=255) ggCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTtat > 2:217321/1‑97 (MQ=255) ggCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTtat < 1:2516290/97‑1 (MQ=255) cTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTatat > 1:1343952/1‑97 (MQ=255) cTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTatat < 1:846083/97‑1 (MQ=255) gggCTTTTTTTGTTTTAGGGTATAGAAAAACGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCaaa < 2:724533/97‑1 (MQ=255) ggCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCaaaa < 1:975916/97‑1 (MQ=255) ggCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCaaaa < 1:1445410/97‑1 (MQ=255) gCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCaaaaa > 1:1644649/1‑97 (MQ=255) ttttGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAaataa < 2:3596407/97‑1 (MQ=255) ttttGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAaataa < 2:2088329/97‑1 (MQ=255) ttttGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAaataa < 1:1257893/97‑1 (MQ=255) ttttGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAaataa < 1:207972/97‑1 (MQ=255) ttttGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAaataa < 1:2932726/97‑1 (MQ=255) ttttGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAaataa > 2:2896535/1‑97 (MQ=255) tttGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAaataat < 1:3510021/97‑1 (MQ=255) ttGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTAAAAATGCAAAAataata < 2:3154297/97‑1 (MQ=255) tgtgTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAatat < 1:3667979/97‑1 (MQ=255) gtTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGaa < 2:534138/97‑1 (MQ=255) gtTTTGGGGTATAGAAAAAGGGAAAAAAAGTATGATGTGAATGTTTTGTGGTTGGAATTTGCACAAAGATATGTTTATATTGCTAAAATAATATGaa > 2:3567618/1‑97 (MQ=255) tttGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAAtt < 1:2755033/97‑1 (MQ=255) tGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTa < 2:959237/97‑1 (MQ=255) ggggTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAg < 2:2341901/97‑1 (MQ=255) gggTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTGGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGa < 2:563983/97‑1 (MQ=255) ggTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGAt < 1:746798/97‑1 (MQ=255) gTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATg > 2:3687188/1‑97 (MQ=255) tataGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGc < 2:899854/97‑1 (MQ=255) ataGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCa > 2:3501884/1‑97 (MQ=255) ataGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCa < 2:1304693/97‑1 (MQ=255) gAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATaa > 1:358443/1‑97 (MQ=255) gAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATaa < 1:1061775/97‑1 (MQ=255) aaaaaGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATaaa < 2:3061921/97‑1 (MQ=255) aaaGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATaaaaa < 1:1720928/97‑1 (MQ=255) aaGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATaaaaaa > 2:315865/1‑97 (MQ=255) aGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATaaaaaaa > 2:3407843/1‑97 (MQ=255) ggCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGa > 1:1111332/1‑97 (MQ=255) gCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGaa > 2:1560834/1‑97 (MQ=255) gCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGaa > 1:1903578/1‑97 (MQ=255) | CATATGTTAAAGAAGAACAATAATATATAATTTATTGTCAAACCCCGTAGGCATAGGCTTACGGGGCTTTTTGTGTTTTGGGGTATAGAAAAAGGGCAAAAAAGGATGATGTGAATGTTTTGTGTTCGGAATTTGCACAAAGATATGTTTATATTGCAAAAATAATATGAATTTAGATGCATAAAAAAAGAAC > BX571857/391360‑391552 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |