Predicted mutation
evidence seq id position mutation freq annotation gene description
RA BX571857 2,725,891 G→A 35.5% A2V (GCT→GTT)  SAS2532 ← putative surface anchored protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*BX5718572,725,8910GA35.5% 324.7 / inf 264A2V (GCT→GTT) SAS2532putative surface anchored protein
Reads supporting (aligned to +/- strand):  ref base G (80/90);  new base A (38/56);  total (118/146)
Fisher's exact test for biased strand distribution p-value = 3.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 268 total aligned reads displayed.

TCGTACGGCAAGATATTCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTTATCTATCTAGTTATT  >  BX571857/2725795‑2725987
                                                                                                |                                                                                                
  gTACGGCAAGATATTCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGcc                                                                                                >  2:1436556/1‑97 (MQ=255)
  gTACGGCAAGATATTCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGcc                                                                                                >  2:772882/1‑97 (MQ=255)
  gTACGGCAAGATATTCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAAcc                                                                                                >  1:2469898/1‑97 (MQ=255)
     cGGCAAGATATTCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATc                                                                                             <  2:3282658/97‑1 (MQ=255)
         aaGATATTCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAata                                                                                         >  1:903493/1‑97 (MQ=255)
           gATATTCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAAtata                                                                                       >  2:3417402/1‑97 (MQ=255)
             tatTCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACt                                                                                     <  2:1995183/97‑1 (MQ=255)
             tatTCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACt                                                                                     <  2:3335854/97‑1 (MQ=255)
              atTCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACtc                                                                                    <  2:966521/97‑1 (MQ=255)
               ttCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACtcc                                                                                   >  2:1259461/1‑97 (MQ=255)
               ttCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACtcc                                                                                   >  1:2602245/1‑97 (MQ=255)
               ttCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACtcc                                                                                   <  1:352546/97‑1 (MQ=255)
                 cGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACtcctt                                                                                 <  2:3604389/97‑1 (MQ=255)
                 cGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACtcctt                                                                                 <  1:2194847/97‑1 (MQ=255)
                 cGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATAGAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACtcctt                                                                                 <  2:2833870/97‑1 (MQ=255)
                  gTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACtccttc                                                                                <  1:3449065/97‑1 (MQ=255)
                    tAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACtccttcct                                                                              >  1:1291167/1‑97 (MQ=255)
                    tAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACtccttccc                                                                              >  2:460290/1‑96 (MQ=255)
                     aaaaTGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTc                                                                             <  2:766729/97‑1 (MQ=255)
                      agaTGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCa                                                                            <  2:3220632/95‑1 (MQ=255)
                        aTGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCact                                                                          >  1:1077031/1‑97 (MQ=255)
                          gATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCactta                                                                        <  2:2346144/97‑1 (MQ=255)
                           aTACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGATCCCCTCGATATTTAACCATCAATATTCTCTTTCCTCacttac                                                                       >  1:684616/1‑97 (MQ=255)
                              cTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAACCGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTActtc                                                                    >  1:2713446/1‑97 (MQ=255)
                              cTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTActtc                                                                    <  2:402758/97‑1 (MQ=255)
                              cTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTActtc                                                                    >  1:2851662/1‑97 (MQ=255)
                               ttGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTActtcc                                                                   <  1:118879/97‑1 (MQ=255)
                                tGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTActtcct                                                                  >  1:3003104/1‑97 (MQ=255)
                                tGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTActtcct                                                                  <  1:2964902/97‑1 (MQ=255)
                                   cGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCa                                                               <  1:3143350/97‑1 (MQ=255)
                                      catcatTGTCGAACGCGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAg                                                            <  2:1463611/97‑1 (MQ=255)
                                      catcatTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAg                                                            <  2:2072151/97‑1 (MQ=255)
                                      catcatTGTAGAACGCGATAACTATACATATAATTGAAACGGTTCCGCTCGATACTTAACAATGAATATAATCATTCCCCACTCACTTCATTCagag                                                            >  2:2146661/1‑97 (MQ=255)
                                       atcatTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGa                                                           >  1:2735396/1‑97 (MQ=255)
                                       atcatTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGa                                                           <  1:2627357/97‑1 (MQ=255)
                                       atcatTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGa                                                           >  2:3151942/1‑97 (MQ=255)
                                        tcatTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGaa                                                          <  2:267214/97‑1 (MQ=255)
                                         catTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAAt                                                         >  2:2972458/1‑97 (MQ=255)
                                         catTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAAt                                                         <  1:3317719/97‑1 (MQ=255)
                                         catTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAAt                                                         <  2:3642053/97‑1 (MQ=255)
                                           ttGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTa                                                       <  2:696923/97‑1 (MQ=255)
                                           ttGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTa                                                       <  1:3371924/97‑1 (MQ=255)
                                            tGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTAc                                                      >  1:1162761/1‑97 (MQ=255)
                                              tCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACAt                                                    <  1:2996681/97‑1 (MQ=255)
                                               cGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATa                                                   <  1:2013364/97‑1 (MQ=255)
                                                   cacGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACtat                                               >  1:629983/1‑97 (MQ=255)
                                                   cacGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACtat                                               <  1:398613/97‑1 (MQ=255)
                                                   cacGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACtat                                               >  1:2022741/1‑97 (MQ=255)
                                                   cacGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACtat                                               <  2:1006972/97‑1 (MQ=255)
                                                   cacGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACtat                                               <  1:3103156/97‑1 (MQ=255)
                                                   cacGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACtat                                               >  2:1289255/1‑97 (MQ=255)
                                                     cGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACtatta                                             <  1:2815248/97‑1 (MQ=255)
                                                     cGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACtatta                                             <  1:4917/97‑1 (MQ=255)
                                                        tAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATtatat                                          >  2:1033789/1‑97 (MQ=255)
                                                        tAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATtatat                                          <  1:3049067/97‑1 (MQ=255)
                                                        gaaCTTTACATATAATTGAAACGATTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATtatat                                          <  2:1173034/96‑1 (MQ=255)
                                                         aaCTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATtatata                                         >  1:79526/1‑97 (MQ=255)
                                                         aaCTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATtatata                                         <  1:1040349/97‑1 (MQ=255)
                                                         aaCTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATtatata                                         <  1:2066783/97‑1 (MQ=255)
                                                          aCTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATAc                                        >  1:2591850/1‑97 (MQ=255)
                                                           cTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATAcc                                       <  1:29768/97‑1 (MQ=255)
                                                           cTTTACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATAcc                                       <  1:634213/97‑1 (MQ=255)
                                                            tttACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACCCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCt                                      >  1:3305046/1‑97 (MQ=255)
                                                             ttACATATAATTGAAACGGTTCCCCTCGATATTTAGCCACCAATATACTCCTTCCTCACCTACTTCCTTCAACGAATTACATACTACTATATAcccg                                     >  1:951643/1‑95 (MQ=255)
                                                             ttACATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTg                                     <  2:1224436/97‑1 (MQ=255)
                                                               aCATATAATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGtt                                   <  2:1898961/97‑1 (MQ=255)
                                                                cATATTATTGAAGCGGTTCCCCTCGATATTTGGCCATCAATATCCTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTc                                  <  2:531768/97‑1 (MQ=255)
                                                                  tataATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTcac                                >  2:1969309/1‑97 (MQ=255)
                                                                   ataATTGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTcaca                               >  2:1684806/1‑97 (MQ=255)
                                                                    taATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACaa                              >  1:1238053/1‑97 (MQ=255)
                                                                    taATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACaa                              >  2:3303475/1‑97 (MQ=255)
                                                                      aTTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGa                            >  2:311675/1‑97 (MQ=255)
                                                                       ttGAAACGGTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGaa                           >  1:3577777/1‑97 (MQ=255)
                                                                          aaaCGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAAtt                        <  1:1576918/97‑1 (MQ=255)
                                                                              ggTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTtata                    >  1:2862293/1‑97 (MQ=255)
                                                                              ggTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTtata                    >  2:1069320/1‑97 (MQ=255)
                                                                              ggTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTtata                    <  1:840781/97‑1 (MQ=255)
                                                                               gTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATAc                   >  2:3497738/1‑97 (MQ=255)
                                                                               gTTCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATAc                   <  2:2925761/97‑1 (MQ=255)
                                                                                ttCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACt                  <  2:2753774/97‑1 (MQ=255)
                                                                                 tCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCACAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACtc                 >  2:888926/1‑96 (MQ=255)
                                                                                 tCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACtt                 >  2:256320/1‑97 (MQ=255)
                                                                                 tCCCCTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACtt                 <  1:1476255/97‑1 (MQ=255)
                                                                                  ccccTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTta                >  2:3009013/1‑97 (MQ=255)
                                                                                  ccccTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTta                <  2:2415829/97‑1 (MQ=255)
                                                                                   cccTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTtat               <  2:1562185/97‑1 (MQ=255)
                                                                                    ccTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTtatc              <  1:772883/97‑1 (MQ=255)
                                                                                     cTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTtatct             <  1:1044401/97‑1 (MQ=255)
                                                                                     cTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTtatct             <  2:2231392/97‑1 (MQ=255)
                                                                                     cTCGATATTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTtatct             <  2:188405/97‑1 (MQ=255)
                                                                                      tCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTtatcta            >  1:2140744/1‑97 (MQ=255)
                                                                                       cGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTtatctat           >  1:560215/1‑97 (MQ=255)
                                                                                          tatTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTTAtctatcta        <  2:1729391/97‑1 (MQ=255)
                                                                                          tatTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTTAtctatcta        <  2:1626284/97‑1 (MQ=255)
                                                                                           atTTAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTCTTATATACCTGTTCACAAGAAATTTATACTTATCTATCTAg       >  2:3433815/1‑97 (MQ=255)
                                                                                            tttAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTTATCTATCTAGt      <  1:1770035/97‑1 (MQ=255)
                                                                                            tttAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTTATCTATCTAGt      <  1:3206904/97‑1 (MQ=255)
                                                                                            tttAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTTATCTATCTAGt      <  1:1338637/97‑1 (MQ=255)
                                                                                             ttAACCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTTATCTATCTAGtt     <  2:1473748/97‑1 (MQ=255)
                                                                                               aGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTTATCTATCTAGTTAt   <  1:1551311/97‑1 (MQ=255)
                                                                                                |                                                                                                
TCGTACGGCAAGATATTCGTTAAAATGATACTTGTCGCCATCATTGTCGAACACGATAACTTTACATATAATTGAAACGGTTCCCCTCGATATTTAGCCATCAATATACTCCTTCCTCACTTACTTCCTTCAAAGAATTACATACTATTATATACCTGTTCACAAGAAATTTATACTTATCTATCTAGTTATT  >  BX571857/2725795‑2725987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: