| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 545,010 | G→A | 5.9% | intergenic (+413/+298) | unknown → / ← SAS0475 | –/GntR family regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 545,010 | 0 | G | A | 5.9% | 1016.7 / 42.0 | 269 | intergenic (+413/+298) | unknown/SAS0475 | –/GntR family regulatory protein |
| Reads supporting (aligned to +/- strand): ref base G (103/150); new base A (13/3); total (116/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.85e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 283 total aligned reads displayed.
TCTCTTTTTTTATGTCTAAAACGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGTATAACTTT > BX571857/544913‑545107 | ctctTTTTTTATGTCTAAAACGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAgc < 1:3144754/98‑1 (MQ=255) tctTTTTTTATGTCAAAAACGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAgcg < 2:2244345/98‑1 (MQ=255) tttttttATGTCTAAAACGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCa > 2:955240/1‑98 (MQ=255) tttttttATGTCTAAAACGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCa < 1:1896122/98‑1 (MQ=255) tATGTCTAAAACGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGt < 1:499217/98‑1 (MQ=255) gTCTAAAACGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTta < 1:3095009/98‑1 (MQ=255) gTCTAAAACCTCAAAATAAAAGTTAACTCAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTta < 1:2691842/98‑1 (MQ=255) cTAAAACGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTtagt < 2:2143296/98‑1 (MQ=255) cTAAAACGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTtagt < 2:1681163/98‑1 (MQ=255) cTAAAACGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTtagt > 1:2245517/1‑98 (MQ=255) tAAAACGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTtagta > 1:1167953/1‑98 (MQ=255) aaaaCGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTtagtag < 2:736419/98‑1 (MQ=255) aCGTCAAAATAAAAGGTAACGCAAGGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGc < 1:902832/98‑1 (MQ=255) taaaaaTAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTaa < 1:2173357/96‑1 (MQ=255) aaaaaaTAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTaa < 2:400161/96‑1 (MQ=255) cAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTaaa > 1:3339711/1‑98 (MQ=255) aaaaTAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAAt > 2:1541881/1‑98 (MQ=255) aaaTAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATg > 1:1800231/1‑98 (MQ=255) aaTAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGa > 1:719113/1‑98 (MQ=255) tAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGt > 1:1758954/1‑98 (MQ=255) aaaaGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTa < 1:2565995/98‑1 (MQ=255) aaaGTTAACACAAGGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTaa < 2:3491002/98‑1 (MQ=255) aGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGc > 1:3189364/1‑98 (MQ=255) aGTTAACACAAAGAAAATGGCGTGACGAAGTGAAAACGTTTGAATCTGACGTAACGAGAAAAGAGCGCAACGAGTTTAGTAGCGCTAAATGAGTAGGc > 2:320954/1‑98 (MQ=14) tAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCgag < 1:2240365/98‑1 (MQ=255) acacAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGagag < 1:67080/98‑1 (MQ=39) acacAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGagag < 1:1501237/98‑1 (MQ=40) cacaAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGATACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGc > 2:2949540/1‑98 (MQ=255) caAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCg < 1:1012793/98‑1 (MQ=40) aaaGAAAATGGCTTGACGAAGGGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCga < 1:3453491/98‑1 (MQ=255) gAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCgaaga > 1:3044291/1‑98 (MQ=37) aaTGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGaaaa > 1:3409574/1‑98 (MQ=39) aTGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAAt > 2:134126/1‑98 (MQ=39) tGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATg > 2:1254979/1‑98 (MQ=17) tGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCa < 1:2600645/52‑1 (MQ=38) tGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATg < 2:1954562/98‑1 (MQ=255) ggCTTGACGCAGTGAAAACGTTTGAATCTGCCGAAACGCGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGa > 2:940676/1‑98 (MQ=255) ggCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGa < 1:2481340/98‑1 (MQ=255) ggCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGa > 1:1135168/1‑98 (MQ=255) ggCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGa > 2:579497/1‑98 (MQ=255) gCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGAt > 2:652335/1‑98 (MQ=255) cTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATa < 1:2504454/98‑1 (MQ=255) cTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATa < 1:1323911/98‑1 (MQ=255) ttGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATaa < 2:2029299/98‑1 (MQ=255) ttGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATaa < 1:3284740/98‑1 (MQ=255) tGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAAt < 1:1733709/98‑1 (MQ=255) gAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTtaa < 2:2508141/98‑1 (MQ=255) aGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTtaata > 1:1803363/1‑98 (MQ=255) gTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTtaataa < 2:3116407/98‑1 (MQ=255) tGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTaataat < 2:3337324/98‑1 (MQ=255) tGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTaataat < 1:992375/98‑1 (MQ=255) tGAAAACGTTTGAATCTGACGAAACGAGAAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAAGGATAAATtaaaact > 2:2580572/1‑94 (MQ=14) gAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATg < 2:1320702/98‑1 (MQ=255) aaaaCGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGt < 1:1960120/98‑1 (MQ=255) aaaCGTTTGAATCGGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTa < 2:3275748/98‑1 (MQ=255) aaCGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTac > 1:2447983/1‑98 (MQ=255) aCGTTTGAATCTGACGAAACGAGAAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTaca < 2:2189497/98‑1 (MQ=255) cGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTacac < 1:2902743/98‑1 (MQ=255) cGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTacac > 1:256956/1‑98 (MQ=255) cGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTacac < 1:444184/98‑1 (MQ=255) tttGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACtt < 1:1041093/98‑1 (MQ=255) tttGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACtt > 1:1567210/1‑98 (MQ=255) tttGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACtt < 2:2211787/98‑1 (MQ=255) ttGAATCTGACGAAACGAGAAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCgaaga > 2:2835697/1‑71 (MQ=9) tGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTc < 2:2758258/98‑1 (MQ=255) gAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCg < 2:431032/98‑1 (MQ=255) aaTCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGa < 1:3620860/98‑1 (MQ=255) aaTCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGa < 1:2354021/98‑1 (MQ=255) aaTCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGa < 2:146860/98‑1 (MQ=255) aaTCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGa < 1:1916908/98‑1 (MQ=255) aaTCTGACGAAACGAGAAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAAGGATAATTTAATAATATACACTTACGa > 2:2719870/1‑98 (MQ=17) cTGACGAAACGAGAAAAGAACGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATa > 1:1315483/1‑73 (MQ=255) tGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGt < 2:3634388/98‑1 (MQ=255) tGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGt > 1:2081790/1‑98 (MQ=255) tGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGt < 2:1469991/98‑1 (MQ=255) gACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTc > 2:2997037/1‑98 (MQ=255) gACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTc > 1:1352260/1‑98 (MQ=255) aCGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCt > 2:3437745/1‑98 (MQ=255) cGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTa < 2:1190667/98‑1 (MQ=255) cGAAACGAGAAAAGAGCGCAACGAGTTTAGAAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTa < 1:1614467/98‑1 (MQ=255) aaCGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgt > 2:808904/1‑98 (MQ=255) aaCGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgt < 2:212132/98‑1 (MQ=255) aaCGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgt < 2:1717623/98‑1 (MQ=255) aCGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgta < 2:2447537/98‑1 (MQ=255) cGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtat < 1:1627249/98‑1 (MQ=255) cGAGAAAAGAGCCCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtat < 2:3070710/98‑1 (MQ=255) gagaAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtatg > 1:610166/1‑98 (MQ=255) ggaAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtatgt < 2:1128614/97‑1 (MQ=255) agaAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtatgt < 1:1233878/98‑1 (MQ=255) agaAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtatgt < 1:2793822/98‑1 (MQ=255) gaAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAAGGATAATTTAATAATGTACACTTTCGATTGTCTAAgtatgta < 2:871405/98‑1 (MQ=255) aaaaGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAgtatgtat < 2:1853262/98‑1 (MQ=255) aaaGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGtata < 2:162651/98‑1 (MQ=255) aaaGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGtata < 1:2044323/98‑1 (MQ=255) aaaGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGtata > 2:2424331/1‑98 (MQ=255) aaGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGTATaa < 2:2521225/98‑1 (MQ=255) agagCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGTATAAc < 2:1834214/98‑1 (MQ=255) agagCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGTATAAc > 2:1063599/1‑98 (MQ=255) gagCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGTATAACt < 1:1435595/98‑1 (MQ=255) agCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGTATAACtt > 1:830855/1‑98 (MQ=255) | TCTCTTTTTTTATGTCTAAAACGTCAAAATAAAAGTTAACACAAAGAAAATGGCTTGACGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAAATGATAATTTAATAATGTACACTTTCGATTGTCTAAGTATGTATAACTTT > BX571857/544913‑545107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |